slc16a1b (slc16a1b,LOC107669643,LOC107717534,LOC107591766,LOC107711946,LOC107679710,LOC108425094)


Basic Information

Item Value
gene id slc16a1b
gene name slc16a1b,LOC107669643,LOC107717534,LOC107591766,LOC107711946,LOC107679710,LOC108425094
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 13045401 ~ 13064523 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043246816.1
CAGGGGTTCTATGAGTCGAGTGGATGGAAACCTCACACCACATATCCACGAATCCACGGATCCACTCAGAGCTCTCCATGCTGCTCGGTGAACCGGGGCCGCACACCGAAGACGGATAGCGCGAACTTACAACCAGAGTTGGTGAATGAAAAGCTCAGACTGACCCAGTGCGGTTGAAGCTCGGCTGATccttctactttttttttttcgtggtCATCGTCGGTGTGTGAAGATGCCGCCAGCGACAGGAGGGCCGGTGGGCTACACTCCTCCAGAGGGAGGCTGGGGCTGGGCAGTGGTAGTAGGAGCCTTTATCAGCATTGGCTTTTCCTATGCCTTCCCCAAGTCCATCACGGTGTTCTTCAAAGAGATCGAGGTGATCTTCAATGCCACCAGCAGCCAAGTGTCGTGGATCTCTTCGATTATGCTGGCTGTCATGTATGCAGGAGGACCAATCAGCAGTATTCTGGTGAATAAGTTTGGTAGTCGGCCAATCATGATAGTTGGGGGCTGTCTGTCTGGAACAGGGTTAGTCGCCGCTTCCTTCTGTAACACAGTGGAGGGTCTGTACTTCTGTGTGGGAGTTATAGGCGGCCTGGGTTTGGCTTTTAATCTGAATCCAGCACTGACCATGATTGGCAAATACTTCTACAAGCGCCGTCCAATAGCTAATGGCATCGCTATGGCGGGCAGCCCGGTGTTCTTGTCCACCCTCGCTCCACTGAACAGCTGGCTGTATGATCAATTTGGGTGGAGGGGGAGTTTCCTCATTCTGGGTGGAGCTTTGCTGAACTGCTGTGTTGCGGGGTCACTAATGCGGCCCCTTGGACCAAAACCACTACCTGCTAGCCCAAAAGAGGACGACGAGCCCAAACGTCAAGAGAAAAAGACCTGCATGCAGACCATTAACAGCTTCCTGGATCTGACCCTGTTCACTCACAGAGGCTTCCTGCTGTATCTTCTCGGAAACGTCGTCATGTTCTTTGGCCTCTTCGCGCCTCTTGTGTTCCTCAGTAACTATGCGAAGAGTAAAGATATTTCCAAGGATAAGGCTGCGTTCTTGTTGTCCATCCTGGCCTTCACTGACATGATCGCTCGGCCGTCCATGGGCCTGGTGGCCAACACTCGCTGGGTCCGTCCTCGTATCCAGTACTTCTTTGCCGCATCTGTGCTGTATAATGGCGTCTGCCACTTGTTGGCACCGCTCTCCACAGATTACCTGGGTTTTGCCATTTATGCTGTGTTTTTCGGCGTGGCATTCGGCTGGCTGAGTTCTGTTCTGTTTGAGACTCTGATGGACCTGGTGGGAGCTCAGAGGTTCTCCAGTGCTGTGGGGTTGGTGACCATTGTGGAGTGTGGGCCTGTGTTGCTGGGGCCTCCCATACTGGGAAAACTCAATGATGATTACGGtgattataaatacacataccaGGGTTGTGGAATCGTCCTGGTGATTGCCAGCATATTCTTGTTCGTGGGAATGGGAATAAACTACCGGCTGGTGgacaaagagaagagagaggaagagaaaagagCTAAACTGGAAGAGAAGGATGCAGAGACGAACGTAGACAATGCCTTGATTGAGAAGGCGAAGGAGGTGGATGGAGACGCATGGGATGCATGAGATGACAATGCCAAATGGAGGAAACATTATACGCACACACACCAACAATCCGTGTCTTCCGGTTTTGACCGTCCAAAATGATAAACTCAAATCATTTCCCCTCTAATGCATCACTTCATGATTCAGCCAGTGTTTAAAACAGCACAAAGGACTACGATGCCAAGAAATTCTCTTTTATGAAGTTTTATACACATCTCATTCTGCCAACATTCATACGGGAGTGTCTCCATACCTTGTCAAAATTCGCCTTTTTTGGTACATGTTATAACCATAATGAGAGCATTCCTATTTCTTGACTCCAGAATAGCAGTTTATACACCTTTAAATGAAACcacaaaatgcacatttcaaattttatatGAGAATAATGTGATGTGTGACATTAAAGTAACATGCACAGAATTTTTCAGTTCGAGATATGGAAGAGGGAGATATTTCACTCCTGTTTATCTtccatttttagaaatatagtGTTTTTGGACTAAAGGTCATTTATTATATgtagattactttttttttttttttttttttttttttttgagtgtgaatgggttttttttttgtatgtgtatgtagcGTACTTTCttgatctgattggctggtaGAGAATAGTGCCAGGCCTTCCTAGACTGCCGTACAAAGGCAAAACACAGGAATTATATCAAGACTTGGGTCAAAGCTTTTGAATTgcttgaaaaataatttttgtgctCTGAACAGTTCAGTAGATCCGATCTGTCACGGGACAGGATTTCACTCATGAAATAtggtaaaaatgtgtaattactgTGTTTTGCCTTTGCATGGCAGAAGAATTCAATGTTTGTTTCCAGGTGCCGTTTAATGGATTTTTTAACAGGCTGCTTCCTGCTCTTGTGATCACATGATCTCAAACTCTTTACTCTGTGTACTGTAACCATGAAGATTTCTGTGGTTACCTTTTTTTAGGAACTACAGCAGACACGATATTGTAAAGGTCTTTTGGTCTGAGACGGTTCTCACTTTTTCACATGAAAAGACTGCTAGAGATGTGCTTCTGCTTTTACTTTTCATTCAGCATTAATGAAGATGAGGTTCACTAGGGTACATTTAGATAGGTGATCCTTTTACAATGTTCACTTGCTTTTTTGACCACATTGCTTTTTTATGTCTAGAAACGATAAATTACGGTCGCCAACAGAACCTGTGCCTTGAATAGGTGCCTTTCTATGCTTTCTAAcaggttttatttgtatttaacagCCATACGTGTACCAGTACTAACTCCTGACCGTTTTTACAGAGCTTTCTACTGTCAAAAGGATGCGTagtgattttaatttgataGTCTGATATTAATTAGCTGTTGATGTGTCatattaagagagagagagagagagcttcatTTCAAACTGAGCCAGCAACAAACACAGCACTGCGTTTGTGTTGACTAGAGatgatttcatttcaagttCTGCTAGTGTTAACCCGAACTCGCTTTCTGAAATAGGTGAAATCCTCGAAGTCGCTCAGCCATTTTATTCCTTCAGCCTTTTAGATTTGGCTGAGCATGTGAAAAACAACACGACTCTCAGGTCAGCGGAAAGAACAAGATTTGGCAGATCTCAAACATATCATTGACAGCTTTGGCTCTCCAGAGAGAGTCAGTTTCAGGTGAAAACAAAGGGATGaaaacaccaccaccacctgCTGGCTGCCGTGATTCATTGCGACACTGCAGTAAAGCTATTGTGTTGTAGTTCTATTTttcaggaatttttttttttttttcagcaaagtaGTAAATCTGTTCTAGTGTCGTTGTTTGGTGTCAGCAGATGACGATTTTGTGTCGTGCACTTTAATTAGGTACATTTAAGGTGAAATTCATACTCGTGAGTTATGCACACCCAGCATTCATGGTGTAAGCCAGtttatttgaccttttattCCTTAGCAGAAACGTATCGGTGCGGGTCCCGAGGGAAGTGCGCTTGTATACAGTTCTCTGGTAATGTAAGCTCAGAGCTCgcctgaataaaagaaaaaacgaataaacaaaaaaagcagagaATCAGAGCAGTGTTAACGAGTCGTTTTCAGTATCTCAGATAAGATCAGTATCTCTGCTCCGACCGCACTTCTGTTTACAGGATCAGAGCTGTCTAAACTCCActccactgtgtgtgtgcatgtggatTTGTTATTAGTGTTGGTAACCGTGTGAAGGAAGATACTGCTGTATAGAGAAAATGGACCATCCTGAGAAAAAGCATTGTAGAGGGTAAAGCCTTTTTacgcttctcttctctttttttgtcgTCGTATTCCCTTTTAATTGTGGGTTCGATGTAACCGAAGTAACACTAACCAgcgtgcttttaaaatgtttcctgTCAGAAAGACAACTGACTGAGGTGAAGAGAGACAGGGTtagaaagtgtttgtgtgtgtttgtgcacagaTTCCATGCAAACTCATGATTCATTTAGGAGAGTGGGTAGAATCTGCCCCTTATGAGGTATTCAGGGCAAAGGAaaaatagttgtatttttagGTATTTGAACCAATATCACGTGTGAGATCTTGTATGatttgatgtttgtgtgtgtgaatgagcaAATCAATaaactttttctaaaaatg
>XM_043246817.1
TCATCCACATGCTGTGCTCTTGCTCTGTCCGCGTGGATAACTTTCCCTGAATTGGACCTCATCCAGTGTGGACTAGTATCTGACACAGTTCACAGGACTGACCCAGTGCGGTTGAAGCTCGGCTGATccttctactttttttttttcgtggtCATCGTCGGTGTGTGAAGATGCCGCCAGCGACAGGAGGGCCGGTGGGCTACACTCCTCCAGAGGGAGGCTGGGGCTGGGCAGTGGTAGTAGGAGCCTTTATCAGCATTGGCTTTTCCTATGCCTTCCCCAAGTCCATCACGGTGTTCTTCAAAGAGATCGAGGTGATCTTCAATGCCACCAGCAGCCAAGTGTCGTGGATCTCTTCGATTATGCTGGCTGTCATGTATGCAGGAGGACCAATCAGCAGTATTCTGGTGAATAAGTTTGGTAGTCGGCCAATCATGATAGTTGGGGGCTGTCTGTCTGGAACAGGGTTAGTCGCCGCTTCCTTCTGTAACACAGTGGAGGGTCTGTACTTCTGTGTGGGAGTTATAGGCGGCCTGGGTTTGGCTTTTAATCTGAATCCAGCACTGACCATGATTGGCAAATACTTCTACAAGCGCCGTCCAATAGCTAATGGCATCGCTATGGCGGGCAGCCCGGTGTTCTTGTCCACCCTCGCTCCACTGAACAGCTGGCTGTATGATCAATTTGGGTGGAGGGGGAGTTTCCTCATTCTGGGTGGAGCTTTGCTGAACTGCTGTGTTGCGGGGTCACTAATGCGGCCCCTTGGACCAAAACCACTACCTGCTAGCCCAAAAGAGGACGACGAGCCCAAACGTCAAGAGAAAAAGACCTGCATGCAGACCATTAACAGCTTCCTGGATCTGACCCTGTTCACTCACAGAGGCTTCCTGCTGTATCTTCTCGGAAACGTCGTCATGTTCTTTGGCCTCTTCGCGCCTCTTGTGTTCCTCAGTAACTATGCGAAGAGTAAAGATATTTCCAAGGATAAGGCTGCGTTCTTGTTGTCCATCCTGGCCTTCACTGACATGATCGCTCGGCCGTCCATGGGCCTGGTGGCCAACACTCGCTGGGTCCGTCCTCGTATCCAGTACTTCTTTGCCGCATCTGTGCTGTATAATGGCGTCTGCCACTTGTTGGCACCGCTCTCCACAGATTACCTGGGTTTTGCCATTTATGCTGTGTTTTTCGGCGTGGCATTCGGCTGGCTGAGTTCTGTTCTGTTTGAGACTCTGATGGACCTGGTGGGAGCTCAGAGGTTCTCCAGTGCTGTGGGGTTGGTGACCATTGTGGAGTGTGGGCCTGTGTTGCTGGGGCCTCCCATACTGGGAAAACTCAATGATGATTACGGtgattataaatacacataccaGGGTTGTGGAATCGTCCTGGTGATTGCCAGCATATTCTTGTTCGTGGGAATGGGAATAAACTACCGGCTGGTGgacaaagagaagagagaggaagagaaaagagCTAAACTGGAAGAGAAGGATGCAGAGACGAACGTAGACAATGCCTTGATTGAGAAGGCGAAGGAGGTGGATGGAGACGCATGGGATGCATGAGATGACAATGCCAAATGGAGGAAACATTATACGCACACACACCAACAATCCGTGTCTTCCGGTTTTGACCGTCCAAAATGATAAACTCAAATCATTTCCCCTCTAATGCATCACTTCATGATTCAGCCAGTGTTTAAAACAGCACAAAGGACTACGATGCCAAGAAATTCTCTTTTATGAAGTTTTATACACATCTCATTCTGCCAACATTCATACGGGAGTGTCTCCATACCTTGTCAAAATTCGCCTTTTTTGGTACATGTTATAACCATAATGAGAGCATTCCTATTTCTTGACTCCAGAATAGCAGTTTATACACCTTTAAATGAAACcacaaaatgcacatttcaaattttatatGAGAATAATGTGATGTGTGACATTAAAGTAACATGCACAGAATTTTTCAGTTCGAGATATGGAAGAGGGAGATATTTCACTCCTGTTTATCTtccatttttagaaatatagtGTTTTTGGACTAAAGGTCATTTATTATATgtagattactttttttttttttttttttttttttttttgagtgtgaatgggttttttttttgtatgtgtatgtagcGTACTTTCttgatctgattggctggtaGAGAATAGTGCCAGGCCTTCCTAGACTGCCGTACAAAGGCAAAACACAGGAATTATATCAAGACTTGGGTCAAAGCTTTTGAATTgcttgaaaaataatttttgtgctCTGAACAGTTCAGTAGATCCGATCTGTCACGGGACAGGATTTCACTCATGAAATAtggtaaaaatgtgtaattactgTGTTTTGCCTTTGCATGGCAGAAGAATTCAATGTTTGTTTCCAGGTGCCGTTTAATGGATTTTTTAACAGGCTGCTTCCTGCTCTTGTGATCACATGATCTCAAACTCTTTACTCTGTGTACTGTAACCATGAAGATTTCTGTGGTTACCTTTTTTTAGGAACTACAGCAGACACGATATTGTAAAGGTCTTTTGGTCTGAGACGGTTCTCACTTTTTCACATGAAAAGACTGCTAGAGATGTGCTTCTGCTTTTACTTTTCATTCAGCATTAATGAAGATGAGGTTCACTAGGGTACATTTAGATAGGTGATCCTTTTACAATGTTCACTTGCTTTTTTGACCACATTGCTTTTTTATGTCTAGAAACGATAAATTACGGTCGCCAACAGAACCTGTGCCTTGAATAGGTGCCTTTCTATGCTTTCTAAcaggttttatttgtatttaacagCCATACGTGTACCAGTACTAACTCCTGACCGTTTTTACAGAGCTTTCTACTGTCAAAAGGATGCGTagtgattttaatttgataGTCTGATATTAATTAGCTGTTGATGTGTCatattaagagagagagagagagagcttcatTTCAAACTGAGCCAGCAACAAACACAGCACTGCGTTTGTGTTGACTAGAGatgatttcatttcaagttCTGCTAGTGTTAACCCGAACTCGCTTTCTGAAATAGGTGAAATCCTCGAAGTCGCTCAGCCATTTTATTCCTTCAGCCTTTTAGATTTGGCTGAGCATGTGAAAAACAACACGACTCTCAGGTCAGCGGAAAGAACAAGATTTGGCAGATCTCAAACATATCATTGACAGCTTTGGCTCTCCAGAGAGAGTCAGTTTCAGGTGAAAACAAAGGGATGaaaacaccaccaccacctgCTGGCTGCCGTGATTCATTGCGACACTGCAGTAAAGCTATTGTGTTGTAGTTCTATTTttcaggaatttttttttttttttcagcaaagtaGTAAATCTGTTCTAGTGTCGTTGTTTGGTGTCAGCAGATGACGATTTTGTGTCGTGCACTTTAATTAGGTACATTTAAGGTGAAATTCATACTCGTGAGTTATGCACACCCAGCATTCATGGTGTAAGCCAGtttatttgaccttttattCCTTAGCAGAAACGTATCGGTGCGGGTCCCGAGGGAAGTGCGCTTGTATACAGTTCTCTGGTAATGTAAGCTCAGAGCTCgcctgaataaaagaaaaaacgaataaacaaaaaaagcagagaATCAGAGCAGTGTTAACGAGTCGTTTTCAGTATCTCAGATAAGATCAGTATCTCTGCTCCGACCGCACTTCTGTTTACAGGATCAGAGCTGTCTAAACTCCActccactgtgtgtgtgcatgtggatTTGTTATTAGTGTTGGTAACCGTGTGAAGGAAGATACTGCTGTATAGAGAAAATGGACCATCCTGAGAAAAAGCATTGTAGAGGGTAAAGCCTTTTTacgcttctcttctctttttttgtcgTCGTATTCCCTTTTAATTGTGGGTTCGATGTAACCGAAGTAACACTAACCAgcgtgcttttaaaatgtttcctgTCAGAAAGACAACTGACTGAGGTGAAGAGAGACAGGGTtagaaagtgtttgtgtgtgtttgtgcacagaTTCCATGCAAACTCATGATTCATTTAGGAGAGTGGGTAGAATCTGCCCCTTATGAGGTATTCAGGGCAAAGGAaaaatagttgtatttttagGTATTTGAACCAATATCACGTGTGAGATCTTGTATGatttgatgtttgtgtgtgtgaatgagcaAATCAATaaactttttctaaaaatg

Function

symbol description
slc16a1b Predicted to enable monocarboxylic acid transmembrane transporter activity. Predicted to be involved in monocarboxylic acid transport. Predicted to act upstream of or within transmembrane transport. Predicted to be located in plasma membrane. Predicted to be integral component of plasma membrane. Is expressed in several structures, including central nervous system; digestive system; liver primordium; musculature system; and neural tube. Human ortholog(s) of this gene implicated in familial hyperinsulinemic hypoglycemia 7. Orthologous to human SLC16A1 (solute carrier family 16 member 1).

NR:

description
PREDICTED: monocarboxylate transporter 1

GO:

id name namespace
GO:0055085 transmembrane transport biological_process
GO:0015711 organic anion transport biological_process
GO:0016021 integral component of membrane cellular_component
GO:0015355 secondary active monocarboxylate transmembrane transporter activity molecular_function

KEGG:

id description
K08179 SLC16A1; MFS transporter, MCT family, solute carrier family 16 (monocarboxylic acid transporters), member 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043246816.1 True 4252 mRNA 0.43 5 13045401 13064523
XM_043246817.1 False 4190 mRNA 0.43 5 13045401 13055255

Neighbor

gene id symbol gene type direction distance location
kazna kazna,LOC107669642,LOC107556484,LOC107591771,LOC107711950,LOC107717500,LOC107680131 coding downstream 63179 12948703 ~ 12982222 (-)
tmem51a tmem51a,LOC107717531,LOC107669600,LOC107556479,LOC107679674,LOC107711951,LOC107591770 coding downstream 96810 12942690 ~ 12948591 (-)
sema3b LOC107717529,LOC107556489,LOC107669651,LOC107591772,LOC107711952 coding downstream 126010 12890474 ~ 12919391 (-)
si:dkey-20d21.12 NA coding downstream 238799 12803927 ~ 12806602 (-)
LOC122350402 LOC107556499,LOC107669622,LOC107717519,LOC107679589,LOC107711962,LOC108190967 coding downstream 310207 12732214 ~ 12735194 (-)
mov10b.2 mov10b.2,LOC107711942,LOC107679724,LOC107591756,LOC107717538 coding upstream 211670 13276193 ~ 13286678 (-)
LOC122350377 LOC107562778,LOC107717538,LOC107669657,LOC107711943,LOC107679735,LOC107591842 coding upstream 222231 13286754 ~ 13298975 (-)
cttnbp2nlb LOC107717506,LOC107669604,LOC107562782,LOC107679769,LOC107711913,LOC107591755 coding upstream 287293 13351816 ~ 13369026 (-)
ddx20 ddx20,LOC107669638,LOC107751451,LOC107594523,LOC107711848,LOC107679786,LOC107556298 coding upstream 461050 13525573 ~ 13531588 (-)
rap1aa rap1aa,rap1a,LOC107594522,LOC107679791,LOC107556321,LOC107751450,LOC101074250 coding upstream 480783 13545306 ~ 13551399 (-)
G63631 LOC107591782,LOC107669630,LOC107711933,LOC107679511 non-coding downstream 244658 12797379 ~ 12800743 (-)
G63610 NA non-coding downstream 297248 12747899 ~ 12748153 (-)
G63588 NA non-coding downstream 372544 12671344 ~ 12672857 (-)
G63585 NA non-coding downstream 374824 12664305 ~ 12670577 (-)
G63581 NA non-coding downstream 388257 12655087 ~ 12657144 (-)
G63711 NA non-coding upstream 63667 13128190 ~ 13131217 (-)
G63735 NA non-coding upstream 197169 13261692 ~ 13274868 (-)
G63745 NA non-coding upstream 267641 13332164 ~ 13332387 (-)
G63751 NA non-coding upstream 283101 13347624 ~ 13350271 (-)
LOC122350567 NA non-coding upstream 555469 13619992 ~ 13682456 (-)
foxp3a foxp3a,si:ch211-167b20.8,LOC107669635,LOC107731227,LOC107550508,LOC107711972,LOC107679368,LOC107591799,LOC107591800 other downstream 541248 12489197 ~ 12504153 (-)
kcnq2a LOC107679259,LOC107668096,LOC107731192,LOC107550457,LOC108442249,LOC108265949,LOC107711924 other downstream 682297 12342160 ~ 12363104 (-)
G63385 NA other downstream 780868 12263694 ~ 12264533 (-)
prok1 prok1,LOC107680267,LOC107711938,LOC107731240 other downstream 990871 12051357 ~ 12054530 (-)
G63274 nt5dc2,LOC107731170,LOC107549943,LOC107668043,LOC107550186,LOC107678756,LOC107745746 other downstream 1266150 11778271 ~ 11779251 (-)
tafa3b si:ch211-254n4.3,fam19a3,LOC107711931,LOC107591764,LOC107562776,LOC107669582,LOC102289964,LOC104918365,LOC106582736,LOC105921069,LOC106517667,LOC108231490,LOC106937909 other upstream 121344 13185867 ~ 13246130 (-)
mc3r mc3r,LOC107751459,LOC107669608,LOC107711834,LOC107680356 other upstream 652105 13716628 ~ 13720514 (-)
G63933 LOC107556304,LOC107751435,LOC107594508 other upstream 744905 13809428 ~ 13863250 (-)
LOC122350784 zgc:162939,LOC107602843,LOC107674500,LOC107724903 other upstream 1321077 14385600 ~ 14455243 (-)
slc20a1a slc20a1a,LOC107724894,LOC107711884,LOC107686402,LOC107667554,LOC107602858,LOC108440301 other upstream 1659189 14723712 ~ 14731391 (-)

Expression


Co-expression Network