LOC122350402 (LOC107556499,LOC107669622,LOC107717519,LOC107679589,LOC107711962,LOC108190967)


Basic Information

Item Value
gene id LOC122350402
gene name LOC107556499,LOC107669622,LOC107717519,LOC107679589,LOC107711962,LOC108190967
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 12732214 ~ 12735194 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043246832.1
ACTCATGCTGACCACCATGACGTACCGCATGCCAAACTTCACTCTGGAGCAGAAGCTTTTCCTGCTTCGGAGAATCCATGCGGTGGTGGACACAGTGCAGGACTTTCGGAAAGACACCAACACTACTGTGCACCGGAACGCCGTATGGGCAGAGCTGGCTCAGGCCTTCAATGCGGCCTTCCCGAGTCGACCCCCCAGCAGCATCGGCTCTCTGAAGACGCTGTGGAAACGGCTGAAGGTGGAATGTCGCGTCGCGCTGCAGAAGCGGCAGGAACAGCAGGCGGCTGGGCTTCCTGTGTCTGCCCTCACTCAGGTGCAGAGAGAGGTGATCGCTCTTGTGCCGAACCTGATCTCCTGTCTGGAGGAGGTAGACGGAGATGGCAGCTATGCCTCGGTTAGGGGTAGCTCACCTGGAGCAGTGATGGGGCTTTCAGGCACTAATGGGAGTGAGCATGAAGATGCTGACCACAGTCAAAATGATGAAGTAGACAGCAAGGAGAACTTAGCCATTGAGCTTGGACTGGTCTCACCATCTCACCCACCTGTTAACTCTGGGATTCCTCCTGGCACTGCCTCCTCTCCTTTCCACTCGCATTCAGTCTCTTCCAGGTCCAGCCGTCCCTCCCTCGTCTACCCAAACAATACAGGAAGCACCTCAGGGCTGGGGTCGGGGACTAGGGGTTCAAACTTTGATACTCCACACAGAGAGCCTGCGGCACCACGTGCTCCTGCCGGAGGAGCAGCTGAGAATTCATTACCACCGATGGACCCTTATACCTCAAACTCCAAATGGGAGTCACGTCGACAGGAACTGTTTGAGCTGGAGCATCAGCAGACAATGAGTCTGTTACTGCTGCAGCAGTGTGTGTGGGAGGAGAAAAGGAAAGCAGTGAGACAAAAAGAGAAGGCGGCACGGGCCAAGAAGAGATATTATCAAGCCAAACTACAGAAGATCGGCGCAGATCCTCCGCCTTCCAGCAGTGACAGCGAGGATAACGAATATCTACAGACCTGAACTCAGATGTTTACGACGTCTTAGCtatgtttgctttctttttgaaagtcattttttttattctagcaatgctgtttatttacaaaacaatatattttttattgtggaCTAAAGTTAATCGGTGTTTAGGAATGTACCATGTGTATCATATGGAGGGGGAATTCACTCGAGCAGGCTTTGTTCCAATAGCCGATACAAATCTGATTTCTTTTCATACTCTCTCATCAACACGGACGCTGCATTCCATTCAGTCAAAAGTGGGATAGTTAAAGGGATAATATGCTTCGAAATTGAAtctcataatttactcaccctcatatcgCTCCAAACAACATGCAAACTTTTTGCAACATAAATGAggtgtgttaaaaaaatgccCCAGCGTTTATTTTGCCCATA

Function

NR:

description
PREDICTED: fibrinogen silencer-binding protein-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043246832.1 True 1414 mRNA 0.50 4 12732214 12735194

Neighbor

gene id symbol gene type direction distance location
si:dkey-72l14.3 si:dkey-72l14.3,LOC107679458,LOC107711968,LOC107591777,LOC107669647 coding downstream 108864 12621092 ~ 12623350 (-)
opn7c opn7c,LOC107711973,LOC107707675,LOC107550512 coding downstream 157981 12566263 ~ 12574233 (-)
efhd2 efhd2,LOC107591793,LOC107711975,LOC107550510,LOC107707677 coding downstream 170748 12544391 ~ 12561466 (-)
taf10 taf10,LOC107679390,LOC107591795,LOC107711978,LOC107550511,LOC107707678,LOC106572212 coding downstream 188311 12541668 ~ 12543903 (-)
suv39h1b suv39h1,suv39h1b,LOC107550505,LOC107679310,LOC107591797,LOC107669636,LOC108265881,LOC108442234 coding downstream 214573 12511451 ~ 12517641 (-)
si:dkey-20d21.12 NA coding upstream 68733 12803927 ~ 12806602 (-)
sema3b LOC107717529,LOC107556489,LOC107669651,LOC107591772,LOC107711952 coding upstream 155280 12890474 ~ 12919391 (-)
tmem51a tmem51a,LOC107717531,LOC107669600,LOC107556479,LOC107679674,LOC107711951,LOC107591770 coding upstream 207496 12942690 ~ 12948591 (-)
kazna kazna,LOC107669642,LOC107556484,LOC107591771,LOC107711950,LOC107717500,LOC107680131 coding upstream 213509 12948703 ~ 12982222 (-)
slc16a1b slc16a1b,LOC107669643,LOC107717534,LOC107591766,LOC107711946,LOC107679710,LOC108425094 coding upstream 310207 13045401 ~ 13064523 (-)
G63588 NA non-coding downstream 59357 12671344 ~ 12672857 (-)
G63585 NA non-coding downstream 61637 12664305 ~ 12670577 (-)
G63581 NA non-coding downstream 75070 12655087 ~ 12657144 (-)
G63579 LOC107679480,LOC107711917,LOC107669654,LOC107556492,LOC107717512,LOC107591779 non-coding downstream 79400 12650283 ~ 12652814 (-)
G63578 NA non-coding downstream 83000 12648642 ~ 12649214 (-)
G63610 NA non-coding upstream 12705 12747899 ~ 12748153 (-)
G63631 LOC107591782,LOC107669630,LOC107711933,LOC107679511 non-coding upstream 62185 12797379 ~ 12800743 (-)
G63711 NA non-coding upstream 392996 13128190 ~ 13131217 (-)
G63735 NA non-coding upstream 526498 13261692 ~ 13274868 (-)
G63745 NA non-coding upstream 596970 13332164 ~ 13332387 (-)
foxp3a foxp3a,si:ch211-167b20.8,LOC107669635,LOC107731227,LOC107550508,LOC107711972,LOC107679368,LOC107591799,LOC107591800 other downstream 228061 12489197 ~ 12504153 (-)
kcnq2a LOC107679259,LOC107668096,LOC107731192,LOC107550457,LOC108442249,LOC108265949,LOC107711924 other downstream 369110 12342160 ~ 12363104 (-)
G63385 NA other downstream 467681 12263694 ~ 12264533 (-)
prok1 prok1,LOC107680267,LOC107711938,LOC107731240 other downstream 677684 12051357 ~ 12054530 (-)
G63274 nt5dc2,LOC107731170,LOC107549943,LOC107668043,LOC107550186,LOC107678756,LOC107745746 other downstream 952963 11778271 ~ 11779251 (-)
zmynd12 zymnd12,LOC107591768,LOC107711949,LOC107679700 other upstream 250460 12985654 ~ 13083372 (-)
tafa3b si:ch211-254n4.3,fam19a3,LOC107711931,LOC107591764,LOC107562776,LOC107669582,LOC102289964,LOC104918365,LOC106582736,LOC105921069,LOC106517667,LOC108231490,LOC106937909 other upstream 450673 13185867 ~ 13246130 (-)
mc3r mc3r,LOC107751459,LOC107669608,LOC107711834,LOC107680356 other upstream 981434 13716628 ~ 13720514 (-)
G63933 LOC107556304,LOC107751435,LOC107594508 other upstream 1074234 13809428 ~ 13863250 (-)
LOC122350784 zgc:162939,LOC107602843,LOC107674500,LOC107724903 other upstream 1650406 14385600 ~ 14455243 (-)

Expression


Co-expression Network