LOC122350422


Basic Information

Item Value
gene id LOC122350422
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 810039 ~ 820685 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043246868.1
tagaatgatggatggatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagatagattcttttttgcataacaaaaaactgttttcttcTCACGTGAGAACCGAAGTGGACGTGCCTGTCATTTCCAGATTTTCATCACTTCACTATTGATCTGAAATACGGAAATATTCCTAAAGAATATCTTTGTCCAAACGTTTGCTGTTATTAGGCGTCATGTACGGCTCACAATTATACATCACTACGGCAGAAATCATTAGGATACtgagtaaagatcatgttccatgaagatgttttgtacatttgcCACAAACTTCATCTCTGATCAGTAATATTCATCActgagaacttcatttgaacaactttaaaggtgatttctcaatatttagattgtttcgtctccctcagattccaggtTTTCTAacagttgtatctcagacaCAGATACGGTCCGATcagacatcaatggaaagagGTTTTTTTCTATCATTATTGACTGTTCATTGATCCGTGGAGATGTTTTTGATCCTCTCTGGAGCACAGTGTGGTTTGTTTGGCTGAAGTCCTGCGTCGGTCAGCACAGCGCTCCCATCACTGATTAACTCGGAGCTGATCTCGGGTCAGAAGCAGACGATCAGGGTCGTCCCGATGGAGAAACTCCTGCTTTCTGAGGACTCTCTTCAGAGCGGGAGCAGACCGATGTGCTCCGTTCCTCCGCGTCAGCAGGCCGACGAGTCTCTGCGTCAGCATGCAGAAAACACCGAGGAGGACGACGGACAGAAGATGACTCTGATCTCGCCGGACGCCGAGACTGACCTGAGGAGAAGAAAGCCCGCTCTGGTCAGATCCAGAACCTTCGACCCGGCGCTTCTGCTGCAAGTCCAGAGTGACTCCGAATCCAAGTGTGAACGCAGAAAACCTCAGTCCGCTCAGtCTCTGCGCACTAATATCCAGTACCACAAGGTTTTTAAAGACATAGGTGAAGAAGAGCAGCTGAGACAGAGTTACACCTGCGCCCTGCAGAAGGACATCCTGTATCAGGGAAGACTGTTTGTGTCTGATAACTGGATCTGTTTCCATTCCAAAGTGTTCGGAAAAGACACGAAGATTGTGATTCCAGTGGCTTCAGTGACGATCATCAAGAAAACCAAAACGGCCATCTTGGTGCCGAACGCTCTGGTCATCTCCACGGCGCGCGAGCGGCATGTGTTCGTCTCGTTTCTGTCTCGAGACGCGACCTACAAGGTCCTGATGTCCGTCTGCCCTCATCTGTTTGAGAAGAGTCCCGGGGTCAGTCAGATCCCGTCTCAGAGTCTCAGGCGACATCCGGCGTCTCTGACCGCGGATTTCTCTGCGGATCTGTCGGATCTGGACGCTCCGGTCAGCCAGGCGGGTCAGCACATGGACGACAGCAGCAGCTCCGACTGCCCCGAGTCTCCGGACTTCATCAAAACCcccaAGTTCACAAAACGGCCCCAAGCTTGTATTGAAGTGACTGAAAGAAATGAGGAACTGGATTCTCACACACAAGAAACCAGCGCCGCTGTCAACATACctgtGTCTTCAGGGTCAGTGGAGGTGATGAAGCGTCTCAGTCCGGTGTCTCTGTCTCTGAACTCTCTGCTGGTGATCTATGTGTCTCTGGTCTGCGTTCTTCTGGTTTCCTCCTGCGTCATGGCGCTGAAGATCATGTCTCTTGAGGAGCGTCTGACATCTCTCGTTTCCATGGAGATTCCCCACAAAAGAGATGAGTATCAAAGCCTGTTTGCTGGAGACACGGCTGAGATCTTCTCGGTTCTGTCCGCGAGTCTCCTGAAGCTGGAAAAGATTCACAGGAACCTGCAGAGACTGATGGAGAACGCGTCCGAGCTTTAAGGTACTTCCCTCGGAGGAAACGCCACGGAGACGACGGCCGTTCCGGTCAATATCGCAATGTTTTAAGCTTTTGAATGCAAGTACTGTGAAAAAAAGACCATCATGGGTAGAACTAGTTCTCATTTGCTGTTTTATACAAGCGTTCAATCAAATACAAGCTGAGCCAGTGCTTTTAGATGCATGTGTAAAATGAAAGGATCTTTTGTGTTGAGCAGACTCTGAATCGTGAATGAAAAACTGTGTACTGAATAAAGTTTGCGTCGAGTGAA

Function

GO:

id name namespace
GO:1901564 organonitrogen compound metabolic process biological_process
GO:0006508 proteolysis biological_process
GO:0005579 membrane attack complex cellular_component
GO:0046930 pore complex cellular_component

KEGG:

id description
ko00770 Pantothenate and CoA biosynthesis
ko04610 Complement and coagulation cascades
ko05150 Staphylococcus aureus infection
ko05322 Systemic lupus erythematosus
ko05020 Prion disease
ko04950 Maturity onset diabetes of the young

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043246868.1 True 2169 mRNA 0.48 14 810039 820685

Neighbor

gene id symbol gene type direction distance location
LOC122350088 NA coding upstream 8294 789181 ~ 801745 (+)
zgc:101664 NA coding upstream 21381 786439 ~ 788658 (+)
LOC122350985 NA coding upstream 25938 781824 ~ 784101 (+)
mfsd14bb si:ch211-87m7.2,LOC108430319,LOC103035659,LOC108265778,LOC107697580,LOC107726864 coding upstream 50671 747411 ~ 759368 (+)
loxhd1b loxhd1,loxhd1b,LOC108430301,LOC108265797 coding upstream 98701 672870 ~ 711338 (+)
LOC122350421 slc12a2,LOC107697601,LOC107712558,LOC108442001,LOC108265961,LOC107573338,LOC105890695,LOC107726215 coding downstream 1674 822359 ~ 841932 (+)
LOC122351049 cep120,zgc:163014,LOC107726217,LOC107712640,LOC107694735 coding downstream 32386 853071 ~ 876947 (+)
LOC122351116 ppic,LOC107704600,LOC107713556,LOC107726227,LOC107566397,LOC100333141,LOC107703627 coding downstream 97858 918543 ~ 923208 (+)
hsd17b4 hsd17b4 coding downstream 184874 1005559 ~ 1016565 (+)
sema6a LOC107661172,LOC107663594 coding downstream 249156 1069841 ~ 1129502 (+)
G59801 NA non-coding upstream 43411 755335 ~ 766628 (+)
G59762 NA non-coding upstream 83034 626849 ~ 727005 (+)
G59756 NA non-coding upstream 165471 567295 ~ 644568 (+)
G59815 NA non-coding downstream 53203 873888 ~ 874199 (+)
G59811 NA non-coding downstream 126992 947677 ~ 950973 (+)
G59825 NA non-coding downstream 136538 957223 ~ 958231 (+)
G59824 NA non-coding downstream 137994 958679 ~ 960171 (+)
G59814 NA non-coding downstream 152801 973486 ~ 976706 (+)
G59807 NA other upstream 5200 803653 ~ 804839 (+)
cdc14b cdc14b,LOC107661524,LOC107704583,LOC107568104,LOC107726879,LOC107570987 other upstream 259352 537775 ~ 550687 (+)
znf608 znf608,LOC107574328,LOC107697597,LOC107712568,LOC107704598,LOC107573349,LOC107726216 other downstream 21392 842077 ~ 852004 (+)
pggt1b pggt1b other downstream 390130 1210815 ~ 1218804 (+)
G60259 LOC107560031,LOC107559593,LOC108412499,LOC107754396 other downstream 1094775 1915460 ~ 1918371 (+)
polb polb,LOC107670984,LOC107722860 other downstream 1194174 2014859 ~ 2020034 (+)
LOC122350053 NA other downstream 1210139 2030824 ~ 2035980 (+)

Expression


Co-expression Network