hes2.2 (LOC107595804,LOC107748990,LOC107687144,LOC107734829)


Basic Information

Item Value
gene id hes2.2
gene name LOC107595804,LOC107748990,LOC107687144,LOC107734829
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 23750246 ~ 23752431 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043246878.1
ATAGTAGTGCATGACCATATTTCTCTAAACATTAGGaatgagcaaaaaataaaacatattgtaaaacataaatctacatgttggattatttaaaaaaaaaaaaatagtgaggGGTATAATTTATACACGCTACAGACGCGTCCTTTTGTTCTTCAGTCTAAAGTTATTTGACAAGAGGAGTTGTTTGAGGCTTGGGGGCGTTTCCATGACGCTCCAGACAGGGATATAAACCCCGCGCGGAACCTCGGTCCTGTACAGACGACCTCTACTCACACCAAGCTCAACATGGCTCCTAACGCCACTGCTGTAACTGCTCTGACTTATGCGCCCCGCACCGTGGCCATGAGAAAAGAAGCAAACGAACTGAGAAGAACTCTAAAGCCATTACTGGAAAAGAAACGGCGAGCGCGCATCAACGAGAGTCTCAACCGATTAAAAGCGCTCATTCTCCCTCTCACAGGCAAAGACaattgCCGTTACTCTAAACTGGAGAAAGCTGATATTTTGGAGATGACGGTCAAATTCCTGACTGATATTCAATCCGCTCCATCTAAAGATAGCGTCGATAGCTTAAAAGATGGATACACGGCTTGCCTCCAGCGCGTTTCAGCGCGCCTACCGCAAACCGGACTCGACGCAGAAACCCGCCATCGCGTCAACGACTTCATCCAGCATTCAGTGACGCTCAAGACCCCAGCCTGCCAGAACTGCTGTGCACAGAGCTCCAAAATGATGACACAAATTCAACAAAAACTCCTCAATTTAAAATCTAGCAGCTCAAAAACCGTAACCCCGGAAAAATGCAAGGTTGCGATTGCCGGTCGACCTAAGCCTGTGCCACTGATCGCCGATTCCAAAGTCTGGAGGCCTTGGTAGATCTACCGTCCAGTCTGCTATTATGATCCTTTCATTCAAGCctttaagaaatgtatatatttgcaaaCCGTTATTctcttgtaatgtttttaatttgatgaatACGTCTCATCGAATCGAATATGAGTATTGTATACTTGGTTTTCCAGTCCAGTGTATAGTAATGGAACAGACCCGTTTGAATCGTTTAGTTTTCATAAAGATCCTGCGCGTGACCTGTATATAACGTGGTTAGATTTATGCCCTTCTGCGGGAAAAATCGTCGGTGGCTCTTGAAAACGCCTAAGTAAAACCCAAAGGGTTGTTAATTGTAAGATATTTGCACTTCATACTTTAGTATTATGGGTTGGTGCAGATTGTTAAATGTAAGCACTCCGTGTTGTTGTTCACCGAAATCTCTATTTTAGGAGATGTGCTATTTATTTCcctgtttatacatttatgtgttGTGCTACATTTATGTTGATGCACTTGTGTGTTATGctacttttttataataaaagttgTAGGCTACCCATCTGTTTTCCTTGAATTATTCTCTCtgatcaaatgaaaataatagaCACAATGGAGAAACTCGTTGTCATATAACAATTACGTGGATTGGCGCGCAAACGAAAACAGATGTGTGTTGGTGTGGTGATGCTCTATAAGCGTAGCCCTATAACCACAATTCACTTACGAGAATTAACCATAGGTTTATCGTAGTAAAAGTGTGGCAGCCATGTTTTTTTGGCGTATTTATTACCATTTGTATAACCACAACTTAACTATAAATACAATGGTTAAACTATGGTTAATGTAGCAAAACCATGATTAATTTGTGGTTGCAATGGTATAACTGTAGTGACCATGTTTTTTAGTAGGCCTATACATTGCATAATGCAGCGTCACGTTGGGGAAAAGCATCTGCCACATAAATAAACGCAAACATAATAACTGACGGCGTcttctttattcatgttaaaGGTGTACGCTTGCATGAAAACCTGGTCTCTACTGCCACCTTTCGGCGGTTTGGTTACTGAGCGAACTGAACGAGTGAAATGTTTAGATAATTTGTAAGCAATTGATTAACATGCTGGTAAACCTAACGATTAAAG

Function

NR:

description
PREDICTED: transcription factor HES-2-like

GO:

id name namespace
GO:0046983 protein dimerization activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043246878.1 True 1979 mRNA 0.41 3 23750246 23752431

Neighbor

gene id symbol gene type direction distance location
hes2.1 hes2.1,LOC107748974,LOC107687139,LOC107577158 coding upstream 9015 23740350 ~ 23741231 (+)
ybx1 ybx1,LOC107595774,LOC107748958,LOC107693424,LOC107602459 coding upstream 85812 23658081 ~ 23664434 (+)
ppih ppih,LOC107595772,LOC107602460 coding upstream 93395 23635149 ~ 23656851 (+)
dpp9 dpp9 coding upstream 137743 23598728 ~ 23612503 (+)
si:ch211-251b21.1 si:ch211-251b21.1,LOC107748962,LOC107595769,LOC107687113,LOC107691059,LOC107602462,LOC107755276 coding upstream 153115 23586529 ~ 23597131 (+)
LOC122350042 acot7 coding downstream 76235 23828666 ~ 23864915 (+)
LOC122350978 gpr153,LOC107687122,LOC107693426 coding downstream 118805 23871236 ~ 23900075 (+)
LOC122351094 sult1st3,LOC107727994,LOC107594958,LOC107727992,LOC107687124,LOC107687147,LOC107687125 coding downstream 190330 23942761 ~ 23953590 (+)
LOC122350539 sult1st3,LOC107727992,LOC107687125,LOC107687124,LOC107594958,LOC107738928,LOC107727989 coding downstream 203617 23956048 ~ 23963140 (+)
LOC122350362 LOC107687124,LOC107727989,LOC107594958,LOC107727992,LOC107687125 coding downstream 215094 23967525 ~ 23972075 (+)
LOC122350145 NA non-coding upstream 68414 23676434 ~ 23681832 (+)
G66418 LOC107748960,LOC107687117,LOC107691060,LOC107595771,LOC107602461,LOC107755278 non-coding upstream 126775 23620927 ~ 23623471 (+)
G66416 NA non-coding upstream 133564 23615216 ~ 23616682 (+)
G66351 NA non-coding upstream 315213 23434118 ~ 23435033 (+)
G66350 NA non-coding upstream 316501 23432809 ~ 23433745 (+)
ndufa7 ndufa7,LOC107748992,LOC107755274 other upstream 116181 23632350 ~ 23634065 (+)
LOC122350936 LOC107710771,LOC106926566,LOC107691064 other upstream 339685 23403713 ~ 23410561 (+)
prdm16 prdm16,si:ch211-263k4.2 other upstream 348684 23054616 ~ 23401562 (+)
mfn2 mfn2,LOC107748965,LOC107602467,LOC107710790,LOC107678429,LOC107698839,LOC107595787 other upstream 763084 22973995 ~ 22987162 (+)
wrap73 LOC107748967,LOC107698846,LOC107595759,LOC107678416,LOC107602469,LOC107710786 other upstream 824478 22899436 ~ 22925768 (+)
acot7 acot7,LOC107754737,LOC107687121,LOC107693425 other downstream 137 23752568 ~ 23804049 (+)

Expression


Co-expression Network