st6galnac5b (st6galnac5b,LOC107599835,LOC107657873,LOC107710911,LOC107743856,LOC107550326,LOC107700626)


Basic Information

Item Value
gene id st6galnac5b
gene name st6galnac5b,LOC107599835,LOC107657873,LOC107710911,LOC107743856,LOC107550326,LOC107700626
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 8922693 ~ 8934751 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043246899.1
CTGAGCTTCAGTATGAGGGTGCGCGCGAGCAGAAGTGCTGGCTGGAAGATGTGAAGTGTGGATTTGTAAAGCTGCTGTCGGTGAGGCTGAAGAACACGCCTGGACTGAACGGACAGAATTAAACACTTCACAATATGAAGACGCGAACGCGTCATGGGATCATATTGATTGGTGTTGTAAGCGTGCTTACAAGCTTATTGTTCCTGTACAACAGCAGTTTTACTGACGCACCAGAAGATCAGATGAAGTCAGATGGACATCAGATGGACGTTCTACAGCAGAAACCATCCCATTTAAAAGGTTACAGCAGCATCATTGATCATAAGCCTCTTAGGATGCATTGCAAAAGCTGTGCTTTAGTGACCAGCTCTGGTCACATGACCGGAAGTGGCCGAGGTGCAGAGATTGACCACAAGGAGTGCGTCATCCGTATGAATGATGCCCCGACACAAGGCTACCAGAGGGATGTGGGCCAGCGAACGAGTCTGCGCGTGGTGGCACACTCCAGCATGCAGCGTGTGCTACGAAACCGCCTTGAGCTGCTCAACTCCAGCCAGAACACCTGCTTTATCTTCTGGGGGCCTGGAAACTACATGCGCCAAGACGGGAAAGGCCTCGTCTACAACAACCTGCGTCTGCTGAAGCAGATGATGCCCAAGCTACAGGTGTACATCATCTCCAGGTTAAAGATGCTGCATTTTGACGAGCTCTTTAAGAAGGAAACGGGGAAAGATAGAAAAAGGTCCAATTCCTGGCTGAGCACAGGCTGGTTCACTATGGCGATCGCTATGGAGATGTGTGACAGAATCAACGTCTATGGCATGATTCCTCCCGAGTTCTGCAGGTCGTCCAACCTCGAGCCATCCGTGCCGTATCACTACTATGAGCCTGCGGGGCCAgatgaatgtaaaatgtatctCTCCCACGAGCAGGGACGGCACGGCAGCCACCATCGCTTCATCACAGAGAAACGCGTCTTTGCCAACTGGGCACGATTGTTCAACATACACTTTTATCAACCGGAGTGGAGACCGGCACCTGTCACAAAAAACGGCACAAACACCGGGGTGTTTCACAGACTCAGAACCTCTGTGTTCTTTTGAGGACAAACCTTGAACGTTCGAACTGCAAACGCATTATGAATAAAGGTTTTCGACGATTGTGGATTAAAAGAGCAAGGTCCAACTTTGCTGAAGATTTTAATCGCGAAAGCGCTGAAGACCAGCGTTACAAAGATTATGTAAAATGTGACGAGaacaaacagtgttttattCACATTACTTATTAATTGTAACAGTGCGGTCCACGTTGGTTTGTAATTTAGAAAACTGGGTTACTGTATAATTATATCACATTTTCTGTTTCCAGAAATGACTAGTTTGATATCTAGGACATATTGTTCTCTGTgtgtaatttcatttaaattatacataggGCCTCAATAATTTGTGCCGCGTGGAGAGTGTCAAGCAcataatgttaacattttttttcactcagTGGCATCCAAAGAGAGCCGTTTACAAATTGGGCTTTTTCCAAATGACACTTTTATCATAGGGCCTCATTGGATTTGTCAGATTTCGTTTTTTGTACAGAGATATTTAAATAAGATATTCATTTCTTAATACAAATCTGTAAATACAGCTTTATGCTAATACTATAATGTTATCAGTAGTTCTAGTCTTTTCTCTAAATCAGATTCccagaacaacttttttttggttcataTTTCTacatacatttcatatttcctGACGCATTGACATTAACTATCTTAATCGAGTCATATGCTGACACAAGCTGCTccgattaaaaatattataaatgaccCGTGTTTGCCGCTGTTTTGAAATACtgtattaatttaaagaatCAACTGTGAAGATTCATTTCTTCATTAATGAGGTTTTGATGCATGTTTGAGACCACCGCAACAGTCCGAGAGTTATATACGATCACACCAGTTTGCTCATCAAGCaacataaccttttttttt
>XM_043246900.1
TCAGTATGAGGGTGCGCGCGAGCAGAAGTGCTGGCTGGAAGATGTGAAGTGTGGATTTGTAAAGCTGCTGTCGGTGAGGCTGAAGAACACGCCTGGACTGAACGGACAGAATTAAACACTTCACAATATGAAGACGCGAACGGTAGACATTACACAATAACTTTACAAACATTCACCGAGCGTCATGGGATCATATTGATTGGTGTTGTAAGCGTGCTTACAAGCTTATTGTTCCTGTACAACAGCAGTTTTACTGACGCACCAGAAGATCAGATGAAGTCAGATGGACATCAGATGGACGTTCTACAGCAGAAACCATCCCATTTAAAAGGTTACAGCAGCATCATTGATCATAAGCCTCTTAGGATGCATTGCAAAAGCTGTGCTTTAGTGACCAGCTCTGGTCACATGACCGGAAGTGGCCGAGGTGCAGAGATTGACCACAAGGAGTGCGTCATCCGTATGAATGATGCCCCGACACAAGGCTACCAGAGGGATGTGGGCCAGCGAACGAGTCTGCGCGTGGTGGCACACTCCAGCATGCAGCGTGTGCTACGAAACCGCCTTGAGCTGCTCAACTCCAGCCAGAACACCTGCTTTATCTTCTGGGGGCCTGGAAACTACATGCGCCAAGACGGGAAAGGCCTCGTCTACAACAACCTGCGTCTGCTGAAGCAGATGATGCCCAAGCTACAGGTGTACATCATCTCCAGGTTAAAGATGCTGCATTTTGACGAGCTCTTTAAGAAGGAAACGGGGAAAGATAGAAAAAGGTCCAATTCCTGGCTGAGCACAGGCTGGTTCACTATGGCGATCGCTATGGAGATGTGTGACAGAATCAACGTCTATGGCATGATTCCTCCCGAGTTCTGCAGGTCGTCCAACCTCGAGCCATCCGTGCCGTATCACTACTATGAGCCTGCGGGGCCAgatgaatgtaaaatgtatctCTCCCACGAGCAGGGACGGCACGGCAGCCACCATCGCTTCATCACAGAGAAACGCGTCTTTGCCAACTGGGCACGATTGTTCAACATACACTTTTATCAACCGGAGTGGAGACCGGCACCTGTCACAAAAAACGGCACAAACACCGGGGTGTTTCACAGACTCAGAACCTCTGTGTTCTTTTGAGGACAAACCTTGAACGTTCGAACTGCAAACGCATTATGAATAAAGGTTTTCGACGATTGTGGATTAAAAGAGCAAGGTCCAACTTTGCTGAAGATTTTAATCGCGAAAGCGCTGAAGACCAGCGTTACAAAGATTATGTAAAATGTGACGAGaacaaacagtgttttattCACATTACTTATTAATTGTAACAGTGCGGTCCACGTTGGTTTGTAATTTAGAAAACTGGGTTACTGTATAATTATATCACATTTTCTGTTTCCAGAAATGACTAGTTTGATATCTAGGACATATTGTTCTCTGTgtgtaatttcatttaaattatacataggGCCTCAATAATTTGTGCCGCGTGGAGAGTGTCAAGCAcataatgttaacattttttttcactcagTGGCATCCAAAGAGAGCCGTTTACAAATTGGGCTTTTTCCAAATGACACTTTTATCATAGGGCCTCATTGGATTTGTCAGATTTCGTTTTTTGTACAGAGATATTTAAATAAGATATTCATTTCTTAATACAAATCTGTAAATACAGCTTTATGCTAATACTATAATGTTATCAGTAGTTCTAGTCTTTTCTCTAAATCAGATTCccagaacaacttttttttggttcataTTTCTacatacatttcatatttcctGACGCATTGACATTAACTATCTTAATCGAGTCATATGCTGACACAAGCTGCTccgattaaaaatattataaatgaccCGTGTTTGCCGCTGTTTTGAAATACtgtattaatttaaagaatCAACTGTGAAGATTCATTTCTTCATTAATGAGGTTTTGATGCATGTTTGAGACCACCGCAACAGTCCGAGAGTTATATACGATCACACCAGTTTGCTCATCAAGCaacataaccttttttttt
>XM_043246901.1
GTTTTACTGACGCACCAGAAGATCAGATGAAGTCAGATGGACATCAGATGGACGTTCTACAGCAGAAACCATCCCATTTAAAAGGTTACAGCAGCATCATTGATCATAAGGTGACTTGCTTTCATTAGCCTCTTAGGATGCATTGCAAAAGCTGTGCTTTAGTGACCAGCTCTGGTCACATGACCGGAAGTGGCCGAGGTGCAGAGATTGACCACAAGGAGTGCGTCATCCGTATGAATGATGCCCCGACACAAGGCTACCAGAGGGATGTGGGCCAGCGAACGAGTCTGCGCGTGGTGGCACACTCCAGCATGCAGCGTGTGCTACGAAACCGCCTTGAGCTGCTCAACTCCAGCCAGAACACCTGCTTTATCTTCTGGGGGCCTGGAAACTACATGCGCCAAGACGGGAAAGGCCTCGTCTACAACAACCTGCGTCTGCTGAAGCAGATGATGCCCAAGCTACAGGTGTACATCATCTCCAGGTTAAAGATGCTGCATTTTGACGAGCTCTTTAAGAAGGAAACGGGGAAAGATAGAAAAAGGTCCAATTCCTGGCTGAGCACAGGCTGGTTCACTATGGCGATCGCTATGGAGATGTGTGACAGAATCAACGTCTATGGCATGATTCCTCCCGAGTTCTGCAGGTCGTCCAACCTCGAGCCATCCGTGCCGTATCACTACTATGAGCCTGCGGGGCCAgatgaatgtaaaatgtatctCTCCCACGAGCAGGGACGGCACGGCAGCCACCATCGCTTCATCACAGAGAAACGCGTCTTTGCCAACTGGGCACGATTGTTCAACATACACTTTTATCAACCGGAGTGGAGACCGGCACCTGTCACAAAAAACGGCACAAACACCGGGGTGTTTCACAGACTCAGAACCTCTGTGTTCTTTTGAGGACAAACCTTGAACGTTCGAACTGCAAACGCATTATGAATAAAGGTTTTCGACGATTGTGGATTAAAAGAGCAAGGTCCAACTTTGCTGAAGATTTTAATCGCGAAAGCGCTGAAGACCAGCGTTACAAAGATTATGTAAAATGTGACGAGaacaaacagtgttttattCACATTACTTATTAATTGTAACAGTGCGGTCCACGTTGGTTTGTAATTTAGAAAACTGGGTTACTGTATAATTATATCACATTTTCTGTTTCCAGAAATGACTAGTTTGATATCTAGGACATATTGTTCTCTGTgtgtaatttcatttaaattatacataggGCCTCAATAATTTGTGCCGCGTGGAGAGTGTCAAGCAcataatgttaacattttttttcactcagTGGCATCCAAAGAGAGCCGTTTACAAATTGGGCTTTTTCCAAATGACACTTTTATCATAGGGCCTCATTGGATTTGTCAGATTTCGTTTTTTGTACAGAGATATTTAAATAAGATATTCATTTCTTAATACAAATCTGTAAATACAGCTTTATGCTAATACTATAATGTTATCAGTAGTTCTAGTCTTTTCTCTAAATCAGATTCccagaacaacttttttttggttcataTTTCTacatacatttcatatttcctGACGCATTGACATTAACTATCTTAATCGAGTCATATGCTGACACAAGCTGCTccgattaaaaatattataaatgaccCGTGTTTGCCGCTGTTTTGAAATACtgtattaatttaaagaatCAACTGTGAAGATTCATTTCTTCATTAATGAGGTTTTGATGCATGTTTGAGACCACCGCAACAGTCCGAGAGTTATATACGATCACACCAGTTTGCTCATCAAGCaacataaccttttttttt

Function

symbol description
st6galnac5b Predicted to enable alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase activity. Predicted to be involved in ganglioside biosynthetic process and oligosaccharide metabolic process. Predicted to act upstream of or within protein glycosylation. Predicted to be located in Golgi apparatus and membrane. Predicted to be integral component of membrane. Is expressed in several structures, including brain; heart; integument; liver; and pleuroperitoneal region. Orthologous to human ST6GALNAC5 (ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 5).

NR:

description
PREDICTED: alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5-like isoform X1

GO:

id name namespace
GO:0006486 protein glycosylation biological_process
GO:0005794 Golgi apparatus cellular_component
GO:0016021 integral component of membrane cellular_component
GO:0008373 sialyltransferase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043246899.1 False 1999 mRNA 0.43 5 8922693 8934751
XM_043246900.1 True 2030 mRNA 0.43 5 8922693 8934744
XM_043246901.1 False 1801 mRNA 0.43 4 8922693 8933840

Neighbor

gene id symbol gene type direction distance location
prkcz prkcz,LOC107710919,LOC107743854,LOC107548418 coding downstream 10706 8820356 ~ 8911987 (-)
skia ski,skia,LOC107548407,LOC107699765,LOC107657901,LOC107599811,LOC107710903 coding downstream 114094 8746887 ~ 8808599 (-)
rab3c rab3c,LOC107599832,LOC107700568,LOC107743864 coding downstream 316527 8600995 ~ 8606166 (-)
ndufaf2 ndufaf2,LOC107752447,LOC107743894,LOC107657848 coding downstream 441962 8478681 ~ 8480731 (-)
depdc1a depdc1a,LOC107657894,LOC107752443,LOC107599802,LOC107548279,LOC107699654,LOC107716419 coding downstream 446146 8469042 ~ 8476547 (-)
LOC122350776 LOC107599836,LOC107657909,LOC107710921,LOC107743853,LOC107548462 coding upstream 38042 8972793 ~ 8975940 (-)
tnni3k tnni3k,LOC107743849,LOC107550356,LOC107699804,LOC107657874,LOC107710912 coding upstream 56592 8991343 ~ 9001962 (-)
fpgt fpgt,LOC107699845,LOC107585822,LOC107548491 coding upstream 67470 9002221 ~ 9006003 (-)
acot11b LOC107710923,LOC107585821,LOC107657911,LOC107548485,LOC107743846 coding upstream 74975 9009726 ~ 9018000 (-)
rps8b LOC107743876,LOC107710907,LOC107579213 coding upstream 175640 9110391 ~ 9113350 (-)
G62241 NA non-coding downstream 997 8921481 ~ 8921696 (-)
G62235 NA non-coding downstream 1789 8918758 ~ 8920904 (-)
G62239 NA non-coding downstream 8689 8913482 ~ 8914004 (-)
LOC122350893 NA non-coding downstream 182740 8712037 ~ 8739953 (-)
G62120 NA non-coding downstream 414570 8507891 ~ 8508123 (-)
LOC122351086 NA non-coding upstream 1327 8936078 ~ 8942255 (-)
G62255 NA non-coding upstream 33538 8968289 ~ 8972773 (-)
G62262 NA non-coding upstream 71804 9006555 ~ 9006779 (-)
G62263 lrriq3,LOC107657910,LOC107585823,LOC107699824,LOC107548466 non-coding upstream 72083 9006834 ~ 9007105 (-)
G62250 dio1,LOC107700640 non-coding upstream 96114 9030865 ~ 9038700 (-)
pola2 pola2,LOC107599808,LOC107657899 other downstream 265407 8652304 ~ 8657286 (-)
mrps36 mrps36,LOC107657871,LOC107599810,LOC107699743,LOC107743861,LOC107548364,LOC107710901 other downstream 272710 8647270 ~ 8649983 (-)
eps15 eps15,LOC107752431,LOC107599798,LOC107743869 other downstream 506140 8392345 ~ 8416553 (-)
LOC122350139 elavl4 other downstream 689919 8117008 ~ 8232774 (-)
spata6 LOC107657881,LOC107699473,LOC107549716,LOC107757996,LOC107599047 other downstream 1235131 7677496 ~ 7687562 (-)
mindy4 LOC107699968,LOC107585839,LOC107548580 other upstream 322492 9257243 ~ 9262826 (-)
fam78bb fam78bb,LOC107717547,LOC107676968,LOC107751100,LOC107550401,LOC107585866,LOC107695225 other upstream 765643 9700394 ~ 9708621 (-)
mllt1a mllt1a,LOC107731200,LOC107676782,LOC107695250,LOC107549968,LOC107585916 other upstream 1019930 9954681 ~ 9969485 (-)
adamts10 adamts10,LOC107676806,LOC107585873,LOC107731268,LOC107695212,LOC107549976,LOC106613844 other upstream 1060796 9995547 ~ 10041769 (-)
smim24 smim24,LOC107580287 other upstream 1310445 10245196 ~ 10248156 (-)

Expression


Co-expression Network