rfx2 (rfx2,LOC107676724)


Basic Information

Item Value
gene id rfx2
gene name rfx2,LOC107676724
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 9900496 ~ 9933011 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043246907.1
GCCCTTGACGTATGAGGAGGACGGTAGCAACAGTTGCCTCGAGACCCCCGCTCGCCATAGTGACTGTAGTCGTGGAGACAGTTACTTACCAACGGGAGCAACActcagcaacagcagcagcagcagcaactggaggagagagagagggaaaagaaCAGTAAAGCCAGGGCAGATCTAAGCAGAAGGCTGAGGAGAAACCATGCAGCGGTCAGAGGGCGGCTCAGAGTCGGCGTCCACTGTGGCGCTGAGAACCTCCACTTCGGCCCAGGCGCCGGTGGTTCAGCCCGTTCCCGCCTCGCAACAGCGTGTGTTAGTTCAGGCCACCGGCTCTTCCCAGAAGGGAGCTCAGGTGCAGCAGTTGCCAGTGCCTAGAGTGCAACAGGTCCCTcagcaggtcCAGCAGGTTCAGCATGTGTACCAGTCCCAGGTGCAGTATGTGGAGGGAGCAGAAGCAGTCTACCCCAATGGCACAATtcgaACTGCATACTCGTACAACCCAGAGTCCCAGCTGTACGGACAGGGCAGCGGAAGCACCTATTTTGACACTCAAGCAGGTGGTACTCAGGTTACCACCGTCGTCTCCTCTGCTGGCGGAGTGCCTGCCCACAGCATGGTGGGAATTGCCATGGACGTGGGCAGCAGTCAGATCATTTCCAGCGGCAGCGCCTACTTGATCCACGGAGGGATGGAGAGCGGCCGCCACCATACCTCTCACTCCTCGCGCTCCTCATCCGCAATGCTTGAAGTGGCGATTGAAAACCTCCAAAAGTCAGAAGGGATTGCCACTCACAAAAGCAGCCTGCTCAACAGCCATttgCAGTGGCTGTTGGACAATTATGAAACGGCTGAGGGTGTGAGTTTGCCGCGGAGCTCTCTTTATAACCACTATCTCAGACACTGTCAGGAGCAAAAACTGGATCCGGTTAATGCAGCCTCCTTTGGCAAACTCATCCGATCTGTCTTCATGGGCCTTCGCACACGCCGACTTGGCACAAGgggGAACTCAAAATACCATTATTACGGTATTCGTCTCAAGCCTGACTCGCCTCTCAACCGCTTGCAGGAGGACACACAGTACATGGCAATGAGACAACAACCTGTCCATCAGAAACAGAGGTTTAAGCCCTTTCACAAGATGGATGGGATGGGGGACAGTCTGAACAGCGGCTCCCAGCACTCGTCCAGCACCCCTGAGCAGAGTGTGGCGGCACAAAGCCAGCATCACCAGCAGTATATTGATGTGTCTCATGTCCTGCCCCCCTTCCCTTCTCCTGATCTGGGCTCCTGTCCTCTGCCTGAGTCAATCAGCATAAACGATGTGAAAAAACTACAGAGCAACTACAGGATTCACTGTGAGGCGACTCTGGACGTAGTGATGAACTTGCAGTTTCATCTCATAGAGAAGCTATGGCAGACCTTTTGGTATTCAACAGCGCCATCTAGCGACGGAGCCACTACCATTCCTAACAGTGAAGAGGATGTGGAGGACATCAGAGGATTCCCCAGAGAGAAGCTGATCGCTCTGTGTAAATACGAACCAATCAAACAGTGGATGAGGAGCTGCGATCACATCCTGTATCAGGCACTGGTGGAGATCCTCATCCCTGATGTGCTGCGGCCTGTGCCCAGCACCCTTACTCAAGCTATCAGAAACTTCGCCAAGAGTCTGGAAGGGTGGCTGACCTCAGCCATGAGTGACTACCCACAGGAGATTGTCCGCACTAAGGCAGCAGTAGTGAGTGCGTTTGCGCAGACCCTGCGCCGCTACACCTCTCTGAATCACCTGGCCCAGGCAGCACGAGCCGTCCTGCAGAACACGTCCCAGATCAACCAGATGCTCAGCGACCTCAACAGAGTGGACTTCGCTAACGTGCAGGAGCAGGCGTCCTGGGTGTGCCAGTGTGACGAGAGCGTGGTCCAGCGTTTGGAGCAGGACTTTAAGGTGACCCTGCAGCAGCAGAGCTCCCTGGATCAGTGGGCCGCTTGGCTAGATAACGTGGTTAACCAAGTGCTCAAACCGTATGAGGGCAGCAGCAGCTTCCCCCGCGCCGCACGCCAGTTCCTGCTCAAGTGGTCCTTCTACAGCTCCATGGTGATCAGAGACCTGACTCTGCGCTCGGCCGCCAGCTTCGGCTCCTTCCACCTCATCCGTCTGCTCTACGATGAATACATGTTCTATTTGGTGGAACACCGCGTCGCCATGGCAACCGGAGAGACGCCCATCGCTGTCATGGGGGAGTTCAGTGACCTCAGTTCCATGATGCCTTCACTCATGGAGAAAGATGCCTCGTTCTCAGACGATCTGGCCAGTGACGGAGACATGTCGAGGATGAGCGAAAGAAGCCTGAGCGAGCCGGCGGTGAAGAGAGAGCGAATCGAGATCAGTCCCTCCCTGCAGGAGATCTAAGAGCAGGACCAAGATAACACTTATCTGTGAGGTTTTTCTGTATCTTGAGGGTGCGGAGGTGTGTTTagggtcagtgtgtgtgtgtgtgtgtgcgtgtgcgtgcgtctCCCTCTCGCCTTTAGGTTTTCTGCGACTGTGAAACAAGAACGTGCTGGTtttgtgatgtgtttgtttttcatgtgcCATAGTCTTCTTTCAGTGCCTTAGATGAGAAAAGAAACACTAGAGCAGAACTGTCTTTCTCTTTGATTTTTCTCTCGTTCTGTCGTTCCCCCGGCCGTGCCTCTAACCGCAGAATGAATGTATCGTCTCAGAACCTCAGATGTCTAAAGCACCTTTTAAAGATGGTCACATTTTAGACTTTCTGCCTCGGCCGTCTCCTCGCGGTTCCTCAGGCGTAGATGCAACCTGCTGACCCCAAAGCTGCCCACTCGTCGACCCCAACCTGCTGCACATGCAAAGCCTTTTCAATGCCGTTTTGTAGAAAAAACCCCGGCCATATGAGATGCCTAGTCTATACCTCAACAGTTTTTAGTTCTAACGAATTAATGtctaacttttataaaaaaaaaaaatcactataaGAGATTATTCGACTCTGTTTGTTGCCCAGAGAGAGCGGCCCGCTCTCGTTCGAAAGCTTCGGGATGTACATACGCCTACTGTATTGATGGAGATTGATCTGTTTCAGATGAACCCGAGCAGAGCGGCTCCCATCAAAACTGGTTTGTGAAACTTTTTGCTCTAGTTTTGTAGTTACTTGACGAGTTCTTAGTCGTTTGCGGTGGTTAAAAAGAGCCTAGTGGACTTGATATGTTGAACGTAcctgtgtgtgagcgtgcgtcTGTACACAAGGACTTCTGAAGTAACTGGAAGTGAGTGTGTACTCAACAGGTTATGTGaatagtgtcattttttttaattaaaaacgaacacacaagccttttttttttatttttaaataacgaTTAAAAGAACTTCCTTTGCATATTTAAGTAGATATCGTGTAAatgttattgcaaaaaaaagtaaaagctaCATAATAGCCGAAAGCTTTTTCTAGAAGATGTAGAAAACCCAAACTAGACAGGTCCGGTAACAGAATATGCAGATTCTTACAGATACGCCTCATCACCTGGTGCTGTACATCTGATGTTTTAGTTTTCACGCTTGTAACGGAAATAAAGCTGGAAATATTTTCAGGATCTGTTTGTAAATGTTGTGCTGAACCCGGTGGGGATCTTTACTGGTGCCTGGTAGCGGCCCGTGACGGGCACCCTACATGTCCCTCTCTGctatttacaaagaaaaacttCATTTCTACTAGCTTTGTGTTTGTTCTGAGAAGTGATTGGCGGATGTTTTCTCACTGTGGTTGGTTGTGAGTGTCAGGCTCTGTACTTTAACGCCTGTCATGGTTCTTTGCCTGTTGTGTGCTTTCGGAAAGGGAATttgctcttttttctttctttttttttttttttctccaatgcTGTTTTAAAGCTTCTTGCTATGGATTATTTTTATGGAGGTAAATGCAATTCTTCTCACTACTATATTGATACCTTATTtttgtgtctttaaaaaaaaaaatctttatttagcCTCAACCGCTTAGTTCGACTGTATTTTGTACTggtaaaaagtgtaataaatttGTGTAAACCA
>XM_043246908.1
GCCCTTGACGTATGAGGAGGACGGTAGCAACAGTTGCCTCGAGACCCCCGCTCGCCATAGTGACTGTAGTCGTGGAGACAGTTACTTACCAACGGGAGCAACActcagcaacagcagcagcagcagcaactggaggagagagagagggaaaagaaCAGTAAAGCCAGGGCAGATCTAAGCAGAAGGCTGAGGAGAAACCATGCAGCGGTCAGAGGGCGGCTCAGAGTCGGCGTCCACTGTGGCGCTGAGAACCTCCACTTCGGCCCAGGCGCCGGTGGTTCAGCCCGTTCCCGCCTCGCAACAGCGTGTGTTAGTTCAGGCCACCGGCTCTTCCCAGAAGGGAGCTCAGGTGCAGCAGTTGCCAGTGCCTAGAGTGCAACAGGTCCCTcagcaggtcCAGCAGGTTCAGCATGTGTACCAGTCCCAGGTGCAGTATGTGGAGGGAGCAGAAGCAGTCTACCCCAATGGCACAATtcgaACTGCATACTCGTACAACCCAGAGTCCCAGCTGTACGGACAGGGCAGCGGAAGCACCTATTTTGACACTCAAGCAGGTGGTACTCAGGTTACCACCGTCGTCTCCTCTGCTGGCGGAGTGCCTGCCCACAGCATGGTGGGAATTGCCATGGACGTGGGCAGCAGTCAGATCATTTCCAGCGGCAGCGCCTACTTGATCCACGGAGGGATGGAGAGCGGCCGCCACCATACCTCTCACTCCTCGCGCTCCTCATCCGCAATGttgCAGTGGCTGTTGGACAATTATGAAACGGCTGAGGGTGTGAGTTTGCCGCGGAGCTCTCTTTATAACCACTATCTCAGACACTGTCAGGAGCAAAAACTGGATCCGGTTAATGCAGCCTCCTTTGGCAAACTCATCCGATCTGTCTTCATGGGCCTTCGCACACGCCGACTTGGCACAAGgggGAACTCAAAATACCATTATTACGGTATTCGTCTCAAGCCTGACTCGCCTCTCAACCGCTTGCAGGAGGACACACAGTACATGGCAATGAGACAACAACCTGTCCATCAGAAACAGAGGTTTAAGCCCTTTCACAAGATGGATGGGATGGGGGACAGTCTGAACAGCGGCTCCCAGCACTCGTCCAGCACCCCTGAGCAGAGTGTGGCGGCACAAAGCCAGCATCACCAGCAGTATATTGATGTGTCTCATGTCCTGCCCCCCTTCCCTTCTCCTGATCTGGGCTCCTGTCCTCTGCCTGAGTCAATCAGCATAAACGATGTGAAAAAACTACAGAGCAACTACAGGATTCACTGTGAGGCGACTCTGGACGTAGTGATGAACTTGCAGTTTCATCTCATAGAGAAGCTATGGCAGACCTTTTGGTATTCAACAGCGCCATCTAGCGACGGAGCCACTACCATTCCTAACAGTGAAGAGGATGTGGAGGACATCAGAGGATTCCCCAGAGAGAAGCTGATCGCTCTGTGTAAATACGAACCAATCAAACAGTGGATGAGGAGCTGCGATCACATCCTGTATCAGGCACTGGTGGAGATCCTCATCCCTGATGTGCTGCGGCCTGTGCCCAGCACCCTTACTCAAGCTATCAGAAACTTCGCCAAGAGTCTGGAAGGGTGGCTGACCTCAGCCATGAGTGACTACCCACAGGAGATTGTCCGCACTAAGGCAGCAGTAGTGAGTGCGTTTGCGCAGACCCTGCGCCGCTACACCTCTCTGAATCACCTGGCCCAGGCAGCACGAGCCGTCCTGCAGAACACGTCCCAGATCAACCAGATGCTCAGCGACCTCAACAGAGTGGACTTCGCTAACGTGCAGGAGCAGGCGTCCTGGGTGTGCCAGTGTGACGAGAGCGTGGTCCAGCGTTTGGAGCAGGACTTTAAGGTGACCCTGCAGCAGCAGAGCTCCCTGGATCAGTGGGCCGCTTGGCTAGATAACGTGGTTAACCAAGTGCTCAAACCGTATGAGGGCAGCAGCAGCTTCCCCCGCGCCGCACGCCAGTTCCTGCTCAAGTGGTCCTTCTACAGCTCCATGGTGATCAGAGACCTGACTCTGCGCTCGGCCGCCAGCTTCGGCTCCTTCCACCTCATCCGTCTGCTCTACGATGAATACATGTTCTATTTGGTGGAACACCGCGTCGCCATGGCAACCGGAGAGACGCCCATCGCTGTCATGGGGGAGTTCAGTGACCTCAGTTCCATGATGCCTTCACTCATGGAGAAAGATGCCTCGTTCTCAGACGATCTGGCCAGTGACGGAGACATGTCGAGGATGAGCGAAAGAAGCCTGAGCGAGCCGGCGGTGAAGAGAGAGCGAATCGAGATCAGTCCCTCCCTGCAGGAGATCTAAGAGCAGGACCAAGATAACACTTATCTGTGAGGTTTTTCTGTATCTTGAGGGTGCGGAGGTGTGTTTagggtcagtgtgtgtgtgtgtgtgtgcgtgtgcgtgcgtctCCCTCTCGCCTTTAGGTTTTCTGCGACTGTGAAACAAGAACGTGCTGGTtttgtgatgtgtttgtttttcatgtgcCATAGTCTTCTTTCAGTGCCTTAGATGAGAAAAGAAACACTAGAGCAGAACTGTCTTTCTCTTTGATTTTTCTCTCGTTCTGTCGTTCCCCCGGCCGTGCCTCTAACCGCAGAATGAATGTATCGTCTCAGAACCTCAGATGTCTAAAGCACCTTTTAAAGATGGTCACATTTTAGACTTTCTGCCTCGGCCGTCTCCTCGCGGTTCCTCAGGCGTAGATGCAACCTGCTGACCCCAAAGCTGCCCACTCGTCGACCCCAACCTGCTGCACATGCAAAGCCTTTTCAATGCCGTTTTGTAGAAAAAACCCCGGCCATATGAGATGCCTAGTCTATACCTCAACAGTTTTTAGTTCTAACGAATTAATGtctaacttttataaaaaaaaaaaatcactataaGAGATTATTCGACTCTGTTTGTTGCCCAGAGAGAGCGGCCCGCTCTCGTTCGAAAGCTTCGGGATGTACATACGCCTACTGTATTGATGGAGATTGATCTGTTTCAGATGAACCCGAGCAGAGCGGCTCCCATCAAAACTGGTTTGTGAAACTTTTTGCTCTAGTTTTGTAGTTACTTGACGAGTTCTTAGTCGTTTGCGGTGGTTAAAAAGAGCCTAGTGGACTTGATATGTTGAACGTAcctgtgtgtgagcgtgcgtcTGTACACAAGGACTTCTGAAGTAACTGGAAGTGAGTGTGTACTCAACAGGTTATGTGaatagtgtcattttttttaattaaaaacgaacacacaagccttttttttttatttttaaataacgaTTAAAAGAACTTCCTTTGCATATTTAAGTAGATATCGTGTAAatgttattgcaaaaaaaagtaaaagctaCATAATAGCCGAAAGCTTTTTCTAGAAGATGTAGAAAACCCAAACTAGACAGGTCCGGTAACAGAATATGCAGATTCTTACAGATACGCCTCATCACCTGGTGCTGTACATCTGATGTTTTAGTTTTCACGCTTGTAACGGAAATAAAGCTGGAAATATTTTCAGGATCTGTTTGTAAATGTTGTGCTGAACCCGGTGGGGATCTTTACTGGTGCCTGGTAGCGGCCCGTGACGGGCACCCTACATGTCCCTCTCTGctatttacaaagaaaaacttCATTTCTACTAGCTTTGTGTTTGTTCTGAGAAGTGATTGGCGGATGTTTTCTCACTGTGGTTGGTTGTGAGTGTCAGGCTCTGTACTTTAACGCCTGTCATGGTTCTTTGCCTGTTGTGTGCTTTCGGAAAGGGAATttgctcttttttctttctttttttttttttttctccaatgcTGTTTTAAAGCTTCTTGCTATGGATTATTTTTATGGAGGTAAATGCAATTCTTCTCACTACTATATTGATACCTTATTtttgtgtctttaaaaaaaaaaatctttatttagcCTCAACCGCTTAGTTCGACTGTATTTTGTACTggtaaaaagtgtaataaatttGTGTAAACCA
>XM_043246909.1
CCCTTGACGTATGAGGAGGACGGTAGCAACAGTTGCCTCGAGACCCCCGCTCGCCATAGTGACTGTAGTCGTGGAGACAGTTACTTACCAACGGGAGCAACActcagcaacagcagcagcagcagcaactggaggagagagagagggaaaagaaCAGTAAAGCCAGGGCAGATCTAAGCAGAAGGCTGAGGAGAAACCATGCAGCGGTCAGAGGGCGGCTCAGAGTCGGCGTCCACTGTGGCGCTGAGAACCTCCACTTCGGCCCAGGCGCCGGTGGTTCAGCCCGTTCCCGCCTCGCAACAGgtcCAGCAGGTTCAGCATGTGTACCAGTCCCAGGTGCAGTATGTGGAGGGAGCAGAAGCAGTCTACCCCAATGGCACAATtcgaACTGCATACTCGTACAACCCAGAGTCCCAGCTGTACGGACAGGGCAGCGGAAGCACCTATTTTGACACTCAAGCAGGTGGTACTCAGGTTACCACCGTCGTCTCCTCTGCTGGCGGAGTGCCTGCCCACAGCATGGTGGGAATTGCCATGGACGTGGGCAGCAGTCAGATCATTTCCAGCGGCAGCGCCTACTTGATCCACGGAGGGATGGAGAGCGGCCGCCACCATACCTCTCACTCCTCGCGCTCCTCATCCGCAATGCTTGAAGTGGCGATTGAAAACCTCCAAAAGTCAGAAGGGATTGCCACTCACAAAAGCAGCCTGCTCAACAGCCATttgCAGTGGCTGTTGGACAATTATGAAACGGCTGAGGGTGTGAGTTTGCCGCGGAGCTCTCTTTATAACCACTATCTCAGACACTGTCAGGAGCAAAAACTGGATCCGGTTAATGCAGCCTCCTTTGGCAAACTCATCCGATCTGTCTTCATGGGCCTTCGCACACGCCGACTTGGCACAAGgggGAACTCAAAATACCATTATTACGGTATTCGTCTCAAGCCTGACTCGCCTCTCAACCGCTTGCAGGAGGACACACAGTACATGGCAATGAGACAACAACCTGTCCATCAGAAACAGAGGTTTAAGCCCTTTCACAAGATGGATGGGATGGGGGACAGTCTGAACAGCGGCTCCCAGCACTCGTCCAGCACCCCTGAGCAGAGTGTGGCGGCACAAAGCCAGCATCACCAGCAGTATATTGATGTGTCTCATGTCCTGCCCCCCTTCCCTTCTCCTGATCTGGGCTCCTGTCCTCTGCCTGAGTCAATCAGCATAAACGATGTGAAAAAACTACAGAGCAACTACAGGATTCACTGTGAGGCGACTCTGGACGTAGTGATGAACTTGCAGTTTCATCTCATAGAGAAGCTATGGCAGACCTTTTGGTATTCAACAGCGCCATCTAGCGACGGAGCCACTACCATTCCTAACAGTGAAGAGGATGTGGAGGACATCAGAGGATTCCCCAGAGAGAAGCTGATCGCTCTGTGTAAATACGAACCAATCAAACAGTGGATGAGGAGCTGCGATCACATCCTGTATCAGGCACTGGTGGAGATCCTCATCCCTGATGTGCTGCGGCCTGTGCCCAGCACCCTTACTCAAGCTATCAGAAACTTCGCCAAGAGTCTGGAAGGGTGGCTGACCTCAGCCATGAGTGACTACCCACAGGAGATTGTCCGCACTAAGGCAGCAGTAGTGAGTGCGTTTGCGCAGACCCTGCGCCGCTACACCTCTCTGAATCACCTGGCCCAGGCAGCACGAGCCGTCCTGCAGAACACGTCCCAGATCAACCAGATGCTCAGCGACCTCAACAGAGTGGACTTCGCTAACGTGCAGGAGCAGGCGTCCTGGGTGTGCCAGTGTGACGAGAGCGTGGTCCAGCGTTTGGAGCAGGACTTTAAGGTGACCCTGCAGCAGCAGAGCTCCCTGGATCAGTGGGCCGCTTGGCTAGATAACGTGGTTAACCAAGTGCTCAAACCGTATGAGGGCAGCAGCAGCTTCCCCCGCGCCGCACGCCAGTTCCTGCTCAAGTGGTCCTTCTACAGCTCCATGGTGATCAGAGACCTGACTCTGCGCTCGGCCGCCAGCTTCGGCTCCTTCCACCTCATCCGTCTGCTCTACGATGAATACATGTTCTATTTGGTGGAACACCGCGTCGCCATGGCAACCGGAGAGACGCCCATCGCTGTCATGGGGGAGTTCAGTGACCTCAGTTCCATGATGCCTTCACTCATGGAGAAAGATGCCTCGTTCTCAGACGATCTGGCCAGTGACGGAGACATGTCGAGGATGAGCGAAAGAAGCCTGAGCGAGCCGGCGGTGAAGAGAGAGCGAATCGAGATCAGTCCCTCCCTGCAGGAGATCTAAGAGCAGGACCAAGATAACACTTATCTGTGAGGTTTTTCTGTATCTTGAGGGTGCGGAGGTGTGTTTagggtcagtgtgtgtgtgtgtgtgtgcgtgtgcgtgcgtctCCCTCTCGCCTTTAGGTTTTCTGCGACTGTGAAACAAGAACGTGCTGGTtttgtgatgtgtttgtttttcatgtgcCATAGTCTTCTTTCAGTGCCTTAGATGAGAAAAGAAACACTAGAGCAGAACTGTCTTTCTCTTTGATTTTTCTCTCGTTCTGTCGTTCCCCCGGCCGTGCCTCTAACCGCAGAATGAATGTATCGTCTCAGAACCTCAGATGTCTAAAGCACCTTTTAAAGATGGTCACATTTTAGACTTTCTGCCTCGGCCGTCTCCTCGCGGTTCCTCAGGCGTAGATGCAACCTGCTGACCCCAAAGCTGCCCACTCGTCGACCCCAACCTGCTGCACATGCAAAGCCTTTTCAATGCCGTTTTGTAGAAAAAACCCCGGCCATATGAGATGCCTAGTCTATACCTCAACAGTTTTTAGTTCTAACGAATTAATGtctaacttttataaaaaaaaaaaatcactataaGAGATTATTCGACTCTGTTTGTTGCCCAGAGAGAGCGGCCCGCTCTCGTTCGAAAGCTTCGGGATGTACATACGCCTACTGTATTGATGGAGATTGATCTGTTTCAGATGAACCCGAGCAGAGCGGCTCCCATCAAAACTGGTTTGTGAAACTTTTTGCTCTAGTTTTGTAGTTACTTGACGAGTTCTTAGTCGTTTGCGGTGGTTAAAAAGAGCCTAGTGGACTTGATATGTTGAACGTAcctgtgtgtgagcgtgcgtcTGTACACAAGGACTTCTGAAGTAACTGGAAGTGAGTGTGTACTCAACAGGTTATGTGaatagtgtcattttttttaattaaaaacgaacacacaagccttttttttttatttttaaataacgaTTAAAAGAACTTCCTTTGCATATTTAAGTAGATATCGTGTAAatgttattgcaaaaaaaagtaaaagctaCATAATAGCCGAAAGCTTTTTCTAGAAGATGTAGAAAACCCAAACTAGACAGGTCCGGTAACAGAATATGCAGATTCTTACAGATACGCCTCATCACCTGGTGCTGTACATCTGATGTTTTAGTTTTCACGCTTGTAACGGAAATAAAGCTGGAAATATTTTCAGGATCTGTTTGTAAATGTTGTGCTGAACCCGGTGGGGATCTTTACTGGTGCCTGGTAGCGGCCCGTGACGGGCACCCTACATGTCCCTCTCTGctatttacaaagaaaaacttCATTTCTACTAGCTTTGTGTTTGTTCTGAGAAGTGATTGGCGGATGTTTTCTCACTGTGGTTGGTTGTGAGTGTCAGGCTCTGTACTTTAACGCCTGTCATGGTTCTTTGCCTGTTGTGTGCTTTCGGAAAGGGAATttgctcttttttctttctttttttttttttttctccaatgcTGTTTTAAAGCTTCTTGCTATGGATTATTTTTATGGAGGTAAATGCAATTCTTCTCACTACTATATTGATACCTTATTtttgtgtctttaaaaaaaaaaatctttatttagcCTCAACCGCTTAGTTCGACTGTATTTTGTACTggtaaaaagtgtaataaatttGTGTAAACCA

Function

symbol description
rfx2 Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Acts upstream of or within Kupffer's vesicle development and determination of left/right symmetry. Predicted to be located in cytoplasm and nucleus. Is expressed in several structures, including central nervous system; mesoderm; neural plate; neural tube; and pronephros. Orthologous to human RFX2 (regulatory factor X2).

NR:

description
PREDICTED: DNA-binding protein RFX2 isoform X3

GO:

id name namespace
GO:0006355 regulation of transcription, DNA-templated biological_process
GO:0070121 Kupffer's vesicle development biological_process
GO:0007368 determination of left/right symmetry biological_process
GO:0005634 nucleus cellular_component
GO:0003677 DNA binding molecular_function

KEGG:

id description
K09173 RFX1_2_3; regulatory factor X 1/2/3

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043246907.1 True 4075 mRNA 0.50 18 9900496 9933011
XM_043246908.1 False 4000 mRNA 0.50 17 9900496 9933011
XM_043246909.1 False 3984 mRNA 0.49 17 9900496 9933010

Neighbor

gene id symbol gene type direction distance location
lpxn LOC107676702,LOC107717550,LOC107585869,LOC107695247,LOC107750911 coding downstream 43890 9852232 ~ 9856606 (-)
trabd2b si:ch211-120j21.1,LOC107717551,LOC107585868,LOC107676673,LOC107695245,LOC107548850,LOC108442342 coding downstream 63046 9786252 ~ 9837450 (-)
edem3 LOC107717559,LOC107585860,LOC107750782,LOC107548759,LOC107700180 coding downstream 282370 9606505 ~ 9618126 (-)
zgc:92140 zgc:92140,LOC107676598,LOC107585858,LOC107717558,LOC107700167,LOC107548740,LOC107750760 coding downstream 294530 9581828 ~ 9605966 (-)
colgalt2b colgalt2,LOC107751084,LOC107700142,LOC107585927,LOC107676963,LOC107717557 coding downstream 320643 9562094 ~ 9579853 (-)
acer1 acer1,LOC107731201,LOC107676796,LOC107585930,LOC107550428 coding upstream 37117 9970128 ~ 9976762 (-)
myo1f myo1f,LOC107750961,LOC107585872,LOC107548903,LOC107731286,LOC107695252,LOC108413823 coding upstream 46625 9979636 ~ 9995108 (-)
dohh dohh,LOC107745802,LOC107548993,LOC107585881,LOC107695215 coding upstream 320879 10253890 ~ 10256950 (-)
LOC122349939 LOC107731225,LOC107701761,LOC107585934,LOC107745801,LOC107550447,LOC100005423 coding upstream 324134 10257145 ~ 10259192 (-)
haus5 LOC107731222,LOC107585885,LOC107745798,LOC107695262 coding upstream 331830 10264841 ~ 10271997 (-)
G62576 NA non-coding downstream 168342 9731906 ~ 9732154 (-)
G62568 NA non-coding downstream 189500 9710646 ~ 9710996 (-)
G62567 NA non-coding downstream 191275 9708973 ~ 9709221 (-)
G62565 NA non-coding downstream 196898 9703376 ~ 9703598 (-)
G62564 NA non-coding downstream 197305 9702959 ~ 9703191 (-)
G62670 NA non-coding upstream 110177 10043188 ~ 10043398 (-)
G62749 mob3a,LOC107695254,LOC107585875,LOC104921817,LOC103368804,LOC107731185,LOC103137270 non-coding upstream 122040 10055051 ~ 10057928 (-)
G62768 NA non-coding upstream 144406 10077417 ~ 10077652 (-)
LOC122350767 NA non-coding upstream 194874 10127885 ~ 10150991 (-)
G62788 NA non-coding upstream 219228 10152239 ~ 10152905 (-)
fam78bb fam78bb,LOC107717547,LOC107676968,LOC107751100,LOC107550401,LOC107585866,LOC107695225 other downstream 191875 9700394 ~ 9708621 (-)
mindy4 LOC107699968,LOC107585839,LOC107548580 other downstream 637670 9257243 ~ 9262826 (-)
pola2 pola2,LOC107599808,LOC107657899 other downstream 1243210 8652304 ~ 8657286 (-)
mrps36 mrps36,LOC107657871,LOC107599810,LOC107699743,LOC107743861,LOC107548364,LOC107710901 other downstream 1250513 8647270 ~ 8649983 (-)
eps15 eps15,LOC107752431,LOC107599798,LOC107743869 other downstream 1483943 8392345 ~ 8416553 (-)
mllt1a mllt1a,LOC107731200,LOC107676782,LOC107695250,LOC107549968,LOC107585916 other upstream 21670 9954681 ~ 9969485 (-)
adamts10 adamts10,LOC107676806,LOC107585873,LOC107731268,LOC107695212,LOC107549976,LOC106613844 other upstream 62536 9995547 ~ 10041769 (-)
smim24 smim24,LOC107580287 other upstream 312185 10245196 ~ 10248156 (-)
G62760 gpr37l1b,LOC107585901,LOC107731282,LOC107668115,LOC107549203,LOC107695275,LOC107745785,LOC108441645 other upstream 456172 10389183 ~ 10392043 (-)
G62826 cry1ba,LOC108265656,LOC108441644,LOC103461922,LOC105026018,LOC102226488 other upstream 507753 10440764 ~ 10480051 (-)

Expression


Co-expression Network