G30689



Basic Information


Item Value
gene id G30689
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 10693917 ~ 10697207 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>TU34701
AGGAACACCACCTAGGATGGCTGTAAATCATTGGATAATTTTCATTTTTGGGTGAACTATCCCTTTAAGTTTGTCTAATTAAGTTCAGTTAAACATTGTTTATTATTTGTCAGATTGGTGTTACCTGTATTTCTGTTTGGTTAGCTCCCGTTCCAGTGGAGTTAACTGGTGGATGGTGGGACTAAGACGGGTCCTGGACTTCCTCACCTCATTCCCACCGAAAAACCATCTTTTCTGTTCACAAGCACATTAAATCAGCTCTAATAACTGTTGGAAATTGCATTCACCAAGGTTGAACTATAATGTTTTTTTAACCAAAAATATTAAGCATTTTTACAGAGAATGCTTTATGGAGCTGTTCAAAAAGCCCTAATTTGTATTCGAATTCAAAATTACTCAACTGCACTGTGTTTGTAAACTAGAGAAACATGTTGGAGTTTGCTACCATTCCAAGGCATTTATTGGTTTACAATCTACTGCACAATTATCAGAGTTGCTTTGCCCTTTGAAAGATCAATATAATCTTATCAATATCATGTTAGGCTGTCAGACCTTTCCACTGAAGCATCTGTTTGGGAATTCTTTGATGGAGACCTGGTCCACCCGCTTCATAAACCAATAGGGAAGCCTCTCCTCCAGATGAGTGTGAAGTTCAATCTGTGGAGTAGATTGACAGTAAACCATTGTTTATAGGGAGAAATATTTTATTCTTTTTATTAGGACACAATATTAAGAGTTGTGCGGAATCACCTGCATTGCAATCCTCTTTAAACATGCATTTGTCTGAACCTCTGCTATGTCACCAACAGCCAAACCGATCTAAACTCAAAATACATTGTTTGATTGGAATCTGACATACTGGATTGTAGTTTTATTTTTAATTCAGACTGTTTTCTTTTGGACTTACCAGAAGGTTCATGAGAAGAATAGGCACGAGTAAGACAAACCAAATAAAGATGGCCAATGTCAAGTTTGGAAAAGGAAGGTCTCCTTGCAGGTAGGGTTTCAAGAAATTGTCCTGGTAGTTGATTTCTCCAACCATCATGACAAAGGTTTGCAGCAGTGACAGGAACATCCTTCCAAAATGTTGCTGTAAAATAAATTCATATTTTAAATGGAGCTTTAAAGCATTAAAGCTAGTTTTCCTAAATCTATGTTAGTCATATTAATCATTTTACGTTTAACAACACTCATATACTCACCTGTTCGATCATCAAGGCATAGAAGGACAAAGCAAATCCCAATATCAAGTAGAAGAACAACACGATAATGCTCAGCAGTGTCCGTGAGATCTCCCGAAACATTACCACATATATACCAATCCGTTCAAACCTACAACCATGAGAGATTACAGATGATAAGTCCTTAAAAGGCTTCTGTTACATAATTCTGTTCTATGGATGTATTGTCATTCAGTCCAATACCGTTGAAGATAGAGGAGGAGATTTATCCAGGAGGCCAGAGCTGCCAGTGCTCCAGCTTGCCAGTGCCAGGAACTCTTCGCATTCATCAGCAACGGCACCACGAACACCAGAGAACAGATCGCAGCGGCCCAGTCCATGTAGTTAGAAAAATCTCGCAAATAATTCACCCGCTTCCAAAGGCAAGCCACAGTTAAAATGATTAGGCATACTTGAACTTTCAAGATCAAAATCTTTTGAAATGGATAGAATGGAGAGATTTAAGTCCAGCGGTCAGAGGAGTCAAGGGAAGATGAGCCTCCTCTGCTCTGTTTATCATATTAGATACATTTGAGTGTGTTGAAAATGATGTTATAAAGTTACTCTGTGTGTTCGCTCGGTGGCTGCTGTGAGACACTGTTGCACACTGCAGTAAGCTAGATCGATTTTAGAATATCATATTAAATGCTGGATGGCTTGTGTTGATAAATGGCATGCAATTCATTTTAAAACGTATTGTATGATGAAGAAAATTCTGTATTACTGTTACTAAAAACAAAGCTGCATCTGATTATGCTATGTTAGCTACTTCACAAAATAGTGTTTTTTTCTGAGGCATGGTAAAGTATGATACTCACAAAAAATCAAGAAAATTAGATTTAAACAATAAGACTAAACGTGTTGAGCTATATAACAATGATTAATTTTCTGTCTATAAATATATCAAAACAGTTGTTCCCTTGCCTATTAAACATGTAAATATTAAAGCGTCTTTGGTGTTTCCTTGGTTTCTACAAAATAAAACCGGAAAACGAGGGTAACGCGGATATGACGCAATTGACAGGCGACTCCTCACACGTCCCGGAGCCTTGGTTAAAACTGCAATTTTCTCATGATTTACAAATAGTTGCAAACATTTGGGATATTGTAAGTACTCAAGTGAACAAAATATATAACACTGGTCTAGTGGTTTTTGGATATTTTACTGCAAAATTCTTACATATTGCACCTTTAATACAGGTAAGGTTGGCAATATTAAGTGCAGCGTAAAACAAACCTGTTGAAACATTTGCAGGATCTCTTTCCCAACTGCATACATGTTCATAGTAAGAACCAGCAGCATGCATGCTGTTGTTATATAGGACTGCTGTGTAAAGCAAAGAGAATTTGCATCATTTTTTTTTCTTGATCCATACAGTATCATAACATACTATACCTCAATTTTTTGATGAATTCCCTTAGTATATTGTACCTTGTACAAGGACGTGCAGACCATGTTGACTGATGTGACATTTCTTGCAGTGACCAATGTGGGCTTCAGGTTCACAATGAGATAAGTTAAAGGAAACACCCCCAGCGCATACACAGTCATATTGAGCAGATGTGCTTTGATCCCATAGGCATTCCTGTAGAAAAAAAAGGGTTACAAAAGCTCAGGATGTTTGTTGAGACATCAAACATGCCAAATTCAGGTTTTAGCAATAGGTAACTCACCATTTCATCTCCAAATATTTCTTGCAGACTGGATGGGTCAGCAAGCTGACACGATTAAAATTCGCCATAGACTGTAGGGGAGACGTTTTTTGAACATGCCCATTCACAATGAACTATATATATATATATATATATATATATATATATATATATAAATTCTGAACAAAATTGTTTCTTTAAACAAAAATCAGTATTTAGTGTGACCATGTCTCCTGGACTTCCATTTTCTCAAAGAAGGAAACTCTGAGAAACTTCTCATCATATTTTGAAAGTTTTCTTGGCCTTCCAATCCTTTTCTATTCAATTTAGGTTTAAGCGAGCCCGGTTTCTGCTATTGCTCAAGTGTAAGGGGAGGTCACTAAATACTTACCACTTTAGCCTATAAAAGCTGTTTTTT

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU34701 True 3291 lncRNA 0.37 1 10693917 10697207
Loading

Neighbor


gene id symbol gene type direction distance location
CI01000004_10683400_10692323 NA coding upstream 1352 10683400 ~ 10692565 (+)
CI01000004_10630265_10647904 NA coding upstream 46013 10630265 ~ 10647904 (+)
CI01000004_10610634_10613290 ENG2B coding upstream 80287 10609780 ~ 10613630 (+)
CI01000004_10582152_10586349 HTR5AB, HTR5A, HTR5AA coding upstream 107364 10582121 ~ 10586553 (+)
CI01000004_10514814_10550774 NA coding upstream 142997 10514814 ~ 10550920 (+)
CI01000004_10712377_10730563 KCNB2 coding downstream 15170 10712377 ~ 10730563 (+)
CI01000004_10736615_10738593 RDH10, RDH10B coding downstream 39408 10736615 ~ 10739026 (+)
CI01000004_10767883_10769627 TMEM70 coding downstream 70676 10767883 ~ 10769753 (+)
CI01000004_10827227_10829982 PI15B, PI15 coding downstream 129755 10826962 ~ 10831024 (+)
CI01000004_10835420_10847343 CRISPLD1B coding downstream 138213 10835420 ~ 10847343 (+)
G30787 NA non-coding upstream 218966 10474750 ~ 10474951 (+)
G30780 NA non-coding upstream 239657 10453602 ~ 10454260 (+)
G30688 NA non-coding upstream 246180 10436230 ~ 10447737 (+)
CI01000004_10434104_10435287 PTF1A non-coding upstream 260604 10431833 ~ 10435569 (+)
G30681 NA non-coding upstream 348939 10208466 ~ 10344978 (+)
G30839 NA non-coding downstream 4017 10701224 ~ 10701436 (+)
G30678 NA non-coding downstream 35180 10732387 ~ 10736123 (+)
G30861 NA non-coding downstream 53627 10750834 ~ 10751295 (+)
G30863 NA non-coding downstream 56750 10753957 ~ 10754306 (+)
G30864 NA non-coding downstream 58045 10755252 ~ 10755575 (+)
G30797 NA other upstream 196129 10497376 ~ 10497788 (+)
CI01000004_08976512_08980033 TTPA other upstream 1712933 8976254 ~ 8980984 (+)
G28859 NA other upstream 2094314 8599235 ~ 8599603 (+)
CI01000004_08414451_08436256 NA other upstream 2242690 8414316 ~ 8439933 (+)
CI01000004_07654234_07655677 MRPL34 other upstream 3037534 7654234 ~ 7656383 (+)
G31710 NA other downstream 940044 11637251 ~ 11642400 (+)
CI01000004_11666900_11667179 NA other downstream 967566 11666900 ~ 11667659 (+)
G31865 NA other downstream 1494923 12192130 ~ 12197418 (+)
CI01000004_12646972_12652534 NA other downstream 1945547 12646838 ~ 12652570 (+)
CI01000004_14036114_14036449 KIAA0040 other downstream 3326340 14035393 ~ 14039142 (+)

Expression


G30689 Expression in PRJCA010000

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G30689 Expression in each Bioproject

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G30689 Expression in each Sample
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The chart has 1 Y axis displaying Expression. Range: 0 to 80.
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Co-expression Network