fbxl17 (fbxl17,LOC107704582,LOC107712428,LOC107661528,LOC107737136,LOC107570989)


Basic Information

Item Value
gene id fbxl17
gene name fbxl17,LOC107704582,LOC107712428,LOC107661528,LOC107737136,LOC107570989
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 362578 ~ 532388 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043247016.1
TGAAACATTGTAGCAGCCTGACACTCAGCGAGCGCGCGTTCGCGGAGCGTTCGCCCCTGTTTGTGTTCCGCGCGGACGATGAGAGCGCGGGAAGGAGGCGCCGAGGGCCGCGTGAGCTGGTGAGGACCGGCGGGGGTTCGCCGTGACGGAGAGGCGCCGAGAATCATCTATATGGGCCATTTTCTCTCAAAAAATGGTCACGGCCTGAAGAAGAAATCACGGAAGCTGcgcaagaagaagaagaagaggaggaactgCTTCCTTCAGGGCCCCTGCATGCTGTGCTTCGTCGTGCGGGGCAGCAGCGGGAGCGTCGAGGACGATTGGCCCTTCGAGAGCGCGGCCGTGTCCAAACTCGCCGAGCGCTACGCGTCGCTGAACTCGCCCGAGGAGTGCGCCCGCTTCCTCCTCTCCCCGGGAGAGCTGGCCGTCTGGGAGGGCCAGGGTCGGAGTCTGCTCTCCAAGCTGATCGGGCCCCCGGCGCTGTTCCGCGCCGTCGTCCCCGACTATTCGGAAATGGTGTGCAAGCGCAAGTGTGCTGAGCTGCAGCGGTGCACTCCCCGCAAGCAGCCCCGCTGTGCCTTCCAGGAGGCCATGGAGAACGGAGAGGAGCGGGGGGACGGACGCCGCCTGCTGCCTTCGCTGCCTtcgtcctcctcttcctctccgtCGGAGGAGGACGGCGGCTCCGGCGCGGACGGCCCCTCCGCCTCTtcgtcctcgtcctcctcctcctgctgctgTCAGCCGGCTCAGAACGAGAGCTCGGAGGAGACGAGGAGCGCCGAAAACACGGACACGTCCCACGCTAACCAGCTGCCCTCCTCTATACTGCTCAAGGTGTTTTCTCACCTGTCGGTGAAGGAGCGGTGTCTGGGAGCGTCTCTGGTCTGTAAATACTGGCGCGATCTCTGCTTAGACTTCCAGTTCTGGAAACAGATCGATCTCAGCGGCCTCCAGCAGGTCAAGGATGATCTGCTGGTGAAGATCGCGTCCCGGAGGCAGAACGTGACCGAGATCAACATCTCGGACTGCCGTAACGTTCAGGATCACGGCGTTTGCTCTCTGGCCTCCAACTGTCCGGGTCTGATCAAATACACGGCGTACCGCTGCAAGCAGCTGAGCGACGTGTCCCTGAGCACCGTGGCCGTCCACTGCCCGCTGCTGCAGAAACTTCACGTCGGCAATCAGGACAAACTCACTGACCACGCTCTCAAACTGTTGGGCGAACACTGCAGAGAGCTGAAGGACGTTCATTTCGGGCAGTGCTACAGCATCAGCGACGAGGGTCTAGTGGCGCTGGCTCAGGGCTGCAGCAAACTACAGAGGATCTACATGCAGGAGAACAAACTGgTGACTGATCGGTCCGTGCAGGCGTTTGCCGAGAGCTGTCCGGATCTTCAGTTCGTGGGCTTCATGGGCTGCTCGGTGACGTCTCAGGGCGTCATCCACCTGACCCGGctGCAGCACCTGAGCAGTCTGGACCTGCGGCACATCTCTGAGCTCAACAACGAGACCGTGATGGAGGTGGTGAGGAAGTGCAGGAACCTGACGTCACTCAACCTCTGCCTCAACTGGACCATCAAcgacagATGTGTGGAGATCATCGCTAAGGAGGGTCGGAGTCTGAAGGAGCTCTATCTGGTGTCCTGCAAGATCACCGATCACGCTCTGATCTCCATCGGTCAGTACAGCAGCACCATCGAGACGGTGGACGCCGGCTGGTGTAAGGAGATCACGGATCAGGGGGCTACGCAGATCGCCCGGAGCAGCAAGTCTCTGCGCTACCTGGGTCTGATGCGCTGTGACAAGGTGAACGAGGAGACGGTGGAGAGACTGGTGCTGCAGTATCCACACATTGTGTTCAGTACGGTGATGCAGGACTGTAAGAGAACGCTGGAACGAGCCTATCAGATGGGCTGGAGCCCCAACACATCCACGGCctcctaacacacacacacacacacacacagaatcatTATCATTACTATGCCGTTTATTCCGCCTTCCAACATTATGCAGCAGAAACGTCAATATTGTTTGATTCGAGCACACATATgtccatgcacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacaca
>XM_043247017.1
ATCCGGAAGTGTTTTGAAACATTGTAGCAGCCTGACACTCAGCGAGCGCGCGTTCGCGGAGCGTTCGCCCCTGTTTGTGTTCCGCGCGGACGATGAGAGCGCGGGAAGGAGGCGCCGAGGGCCGCGTGAGCTGAGGCGCCGAGAATCATCTATATGGGCCATTTTCTCTCAAAAAATGGTCACGGCCTGAAGAAGAAATCACGGAAGCTGcgcaagaagaagaagaagaggaggaactgCTTCCTTCAGGGCCCCTGCATGCTGTGCTTCGTCGTGCGGGGCAGCAGCGGGAGCGTCGAGGACGATTGGCCCTTCGAGAGCGCGGCCGTGTCCAAACTCGCCGAGCGCTACGCGTCGCTGAACTCGCCCGAGGAGTGCGCCCGCTTCCTCCTCTCCCCGGGAGAGCTGGCCGTCTGGGAGGGCCAGGGTCGGAGTCTGCTCTCCAAGCTGATCGGGCCCCCGGCGCTGTTCCGCGCCGTCGTCCCCGACTATTCGGAAATGGTGTGCAAGCGCAAGTGTGCTGAGCTGCAGCGGTGCACTCCCCGCAAGCAGCCCCGCTGTGCCTTCCAGGAGGCCATGGAGAACGGAGAGGAGCGGGGGGACGGACGCCGCCTGCTGCCTTCGCTGCCTtcgtcctcctcttcctctccgtCGGAGGAGGACGGCGGCTCCGGCGCGGACGGCCCCTCCGCCTCTtcgtcctcgtcctcctcctcctgctgctgTCAGCCGGCTCAGAACGAGAGCTCGGAGGAGACGAGGAGCGCCGAAAACACGGACACGTCCCACGCTAACCAGCTGCCCTCCTCTATACTGCTCAAGGTGTTTTCTCACCTGTCGGTGAAGGAGCGGTGTCTGGGAGCGTCTCTGGTCTGTAAATACTGGCGCGATCTCTGCTTAGACTTCCAGTTCTGGAAACAGATCGATCTCAGCGGCCTCCAGCAGGTCAAGGATGATCTGCTGGTGAAGATCGCGTCCCGGAGGCAGAACGTGACCGAGATCAACATCTCGGACTGCCGTAACGTTCAGGATCACGGCGTTTGCTCTCTGGCCTCCAACTGTCCGGGTCTGATCAAATACACGGCGTACCGCTGCAAGCAGCTGAGCGACGTGTCCCTGAGCACCGTGGCCGTCCACTGCCCGCTGCTGCAGAAACTTCACGTCGGCAATCAGGACAAACTCACTGACCACGCTCTCAAACTGTTGGGCGAACACTGCAGAGAGCTGAAGGACGTTCATTTCGGGCAGTGCTACAGCATCAGCGACGAGGGTCTAGTGGCGCTGGCTCAGGGCTGCAGCAAACTACAGAGGATCTACATGCAGGAGAACAAACTGgTGACTGATCGGTCCGTGCAGGCGTTTGCCGAGAGCTGTCCGGATCTTCAGTTCGTGGGCTTCATGGGCTGCTCGGTGACGTCTCAGGGCGTCATCCACCTGACCCGGctGCAGCACCTGAGCAGTCTGGACCTGCGGCACATCTCTGAGCTCAACAACGAGACCGTGATGGAGGTGGTGAGGAAGTGCAGGAACCTGACGTCACTCAACCTCTGCCTCAACTGGACCATCAAcgacagATGTGTGGAGATCATCGCTAAGGAGGGTCGGAGTCTGAAGGAGCTCTATCTGGTGTCCTGCAAGATCACCGATCACGCTCTGATCTCCATCGGTCAGTACAGCAGCACCATCGAGACGGTGGACGCCGGCTGGTGTAAGGAGATCACGGATCAGGGGGCTACGCAGATCGCCCGGAGCAGCAAGTCTCTGCGCTACCTGGGTCTGATGCGCTGTGACAAGGTGAACGAGGAGACGGTGGAGAGACTGGTGCTGCAGTATCCACACATTGTGTTCAGTACGGTGATGCAGGACTGTAAGAGAACGCTGGAACGAGCCTATCAGATGGGCTGGAGCCCCAACACATCCACGGCctcctaacacacacacacacacacacacagaatcatTATCATTACTATGCCGTTTATTCCGCCTTCCAACATTATGCAGCAGAAACGTCAATATTGTTTGATTCGAGCACACATATgtccatgcacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacaca
>XM_043247018.1
TGAAACATTGTAGCAGCCTGACACTCAGCGAGCGCGCGTTCGCGGAGCGTTCGCCCCTGTTTGTGTTCCGCGCGGACGATGAGAGCGCGGGAAGGAGGCGCCGAGGGCCGCGTGAGCTGGTGAGGACCGGCGGGGGTTCGCCGTGACGGAGAGGCGCCGAGAATCATCTATATGGGCCATTTTCTCTCAAAAAATGGTCACGGCCTGAAGAAGAAATCACGGAAGCTGcgcaagaagaagaagaagaggaggaactgCTTCCTTCAGGGCCCCTGCATGCTGTGCTTCGTCGTGCGGGGCAGCAGCGGGAGCGTCGAGGACGATTGGCCCTTCGAGAGCGCGGCCGTGTCCAAACTCGCCGAGCGCTACGCGTCGCTGAACTCGCCCGAGGAGTGCGCCCGCTTCCTCCTCTCCCCGGGAGAGCTGGCCGTCTGGGAGGGCCAGGGTCGGAGTCTGCTCTCCAAGCTGATCGGGCCCCCGGCGCTGTTCCGCGCCGTCGTCCCCGACTATTCGGAAATGGTGTGCAAGCGCAAGTGTGCTGAGCTGCAGCGGTGCACTCCCCGCAAGCAGCCCCGCTGTGCCTTCCAGGAGGCCATGGAGAACGGAGAGGAGCGGGGGGACGGACGCCGCCTGCTGCCTTCGCTGCCTtcgtcctcctcttcctctccgtCGGAGGAGGACGGCGGCTCCGGCGCGGACGGCCCCTCCGCCTCTtcgtcctcgtcctcctcctcctgctgctgTCAGCCGGCTCAGAACGAGAGCTCGGAGGAGACGAGGAGCGCCGAAAACACGGACACGTCCCACGCTAACCAGCTGCCCTCCTCTATACTGCTCAAGGTGTTTTCTCACCTGTCGGTGAAGGAGCGGTGTCTGGGAGCGTCTCTGGTCTGTAAATACTGGCGCGATCTCTGCTTAGACTTCCAGTTCTGGAAACAGATCGATCTCAGCGGCCTCCAGCAGGTCAAGGATGATCTGCTGGTGAAGATCGCGTCCCGGAGGCAGAACGTGACCGAGATCAACATCTCGGACTGCCGTAACGTTCAGGATCACGGCGTTTGCTCTCTGGCCTCCAACTGTCCGGGTCTGATCAAATACACGGCGTACCGCTGCAAGCAGCTGAGCGACGTGTCCCTGAGCACCGTGGCCGTCCACTGCCCGCTGCTGCAGAAACTTCACGTCGGCAATCAGGACAAACTCACTGACCACGCTCTCAAACTGTTGGGCGAACACTGCAGAGAGCTGAAGGACGTTCATTTCGGGCAGTGCTACAGCATCAGCGACGAGGGTCTAGTGGCGCTGGCTCAGGGCTGCAGCAAACTACAGAGGATCTACATGCAGGAGAACAAACTGgTGACTGATCGGTCCGTGCAGGCGTTTGCCGAGAGCTGTCCGGATCTTCAGTTCGTGGGCTTCATGGGCTGCTCGGTGACGTCTCAGGGCGTCATCCACCTGACCCGGctGCAGCACCTGAGCAGTCTGGACCTGCGGCACATCTCTGAGCTCAACAACGAGACCGTGATGGAGGTGGTGAGGAAGTGCAGGAACCTGACGTCACTCAACCTCTGCCTCAACTGGACCATCAAcgacaggTAAGAGAGCTTCAGGTGC

Function

symbol description
fbxl17 Orthologous to human FBXL17 (F-box and leucine rich repeat protein 17).

NR:

description
F-box/LRR-repeat protein 17

GO: NA

KEGG:

id description
K10283 FBXL17; F-box and leucine-rich repeat protein 17

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043247016.1 True 2130 mRNA 0.59 10 362578 532374
XM_043247017.1 False 2112 mRNA 0.59 10 362578 532388
XM_043247018.1 False 1611 mRNA 0.62 8 448521 532374

Neighbor

gene id symbol gene type direction distance location
efna5b efna5,efna5b,LOC107721028,LOC107709298,LOC107692204,LOC108265807,LOC107661535,LOC100702629 coding downstream 67308 202147 ~ 295270 (-)
LOC122350625 LOC107694826,LOC107583205,LOC107757045,LOC107747425,LOC107569528,LOC107675400 coding downstream 279550 7 ~ 83028 (-)
slc35d2 slc35d2,LOC107570982,LOC107570985 coding upstream 25868 558256 ~ 563214 (-)
LOC122350794 LOC107661539,LOC107704586,LOC107726870,LOC107568101,LOC107581163 coding upstream 40195 572583 ~ 576178 (-)
ubox5 NA coding upstream 48641 581029 ~ 586701 (-)
lzts3b lzts3,LOC107569677,LOC107712591,LOC107661533 coding upstream 56410 588798 ~ 601844 (-)
sprb spr,LOC107661521,LOC107569671,LOC107726883,LOC107712600,LOC107568099 coding upstream 75062 607450 ~ 610914 (-)
G59688 NA non-coding downstream 125921 236074 ~ 236657 (-)
G59654 NA non-coding downstream 278725 83574 ~ 83853 (-)
G59750 NA non-coding upstream 13531 545919 ~ 547911 (-)
G60016 NA non-coding upstream 82893 615281 ~ 617472 (-)
G60036 NA non-coding upstream 128047 660435 ~ 661098 (-)
G60003 NA non-coding upstream 190802 723190 ~ 725000 (-)
G60061 NA non-coding upstream 223236 755624 ~ 756643 (-)
ccl27a NA other upstream 33498 565886 ~ 570973 (-)
LOC122349987 LOC107661519,LOC107712504,LOC107726877,LOC107704593,LOC107573347,LOC794598 other upstream 190757 723145 ~ 731844 (-)
csgalnact1b LOC107712620 other upstream 200405 732793 ~ 739372 (-)
G60098 NA other upstream 603013 1135401 ~ 1138152 (-)
commd10 commd10,LOC107728250,LOC107663591 other upstream 608310 1140698 ~ 1159286 (-)

Expression


Co-expression Network