ndufaf2 (ndufaf2,LOC107752447,LOC107743894,LOC107657848)


Basic Information

Item Value
gene id ndufaf2
gene name ndufaf2,LOC107752447,LOC107743894,LOC107657848
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 8478681 ~ 8480731 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043247026.1
CTAGGTAGTTGTGCAACCTACGGCTCAACGtagatgtgtatgtatgcgCATTAGGAGATAATACATAAACTGATATTTCGTTTATAGAGATGAACCGCATTACGGCTCTGCTGCGAAGAACGTTTGGAGTAGTAAAAGAGCATGTCGGTACAGATCATTtaggaaataaatattattatatacccGAGCAAAAGTCATGGACTGGGCAGGTCATCCGGCCCAAACGCCTAGTAGAAGCAGCCAATCCAAATTACTTTGAGTACATGGAAGGAAACATTCCTACTGAATGGGATGCTTGGATGAGAGGCAGGAGGAAGCAGCCACCTACATTGGAGGAGTTGTTACAGAACGAACGTTCCAGGGAGCAAATCAAAATCAGAGCTATAGATTCAGAGGAGAGGGATAAGGCCTTGCAGGTCAAAGAGTATGAGGAAGGTTTGGTGGCCCAACCTGTTCAGACTCAGGTCAAAGGCCATGCTTCTGCTGCACAGTTTGGACAGACTGAATTCAGTGAGGAGCCTGTAAGCACTGCTAACAAATTCCAGCCTGGGTCCTGGACACCTCCAGGAAGCAAAAAATAGGTTTATTTGAAATCTCCTTTGCTGTCGTCAAGTAAATTTGCAATTTAAGTAAAATCATAGTTCTGCTGATTTTCAATGCATGTCTTGATATATATTCAGTACAGGTTTTCTTGAGACAACtgaaaagcactttatttaagTACTGGTTAGCttgctattattttttcaagtataaaggtgtatttttaaaaatgtacatttctgaaaattaaTACACTATCAGGACATCTGAGACATAGAAAAGCTCAGTAGAAAGAtgattttaacttcaaaccattgcttcctGGTAAATTACAAATCCTCTATCAATATTTTGCCCTCTTCTTGTCTAAATATGGAACCAAAATgcttctaaacaaatatgttggtcGGTTTGATGTGAGAGGATGACAGGGGATGGTCTGTTATTATAATGGATTCTagactttaaagttaaaatgatgaatgttaatttacaaacatgcagcttttcatttcacaagacaTTGATTAAAGGACCATCCAAGTCCATCCAATGTAATATAATGCTTAATTTCTCCAAACcggttctgatgaagaaacaaactggtCTACATCTGatgtttgggtgaaccattAATTTTATCATTACTGAAATGAATTGTGAAATGATGTTAAGAAATAGGTTTCTGAGAGCTCTGCTTCAGGattgtttcaaaatcaaatcaccaaatgtagaatttttttatgcattttgtttaattgaaatgttttcagaTGTCTtaccatatttaaaaaaattgaaattat

Function

symbol description
ndufaf2 Predicted to enable NADH dehydrogenase (ubiquinone) activity. Predicted to be located in membrane. Human ortholog(s) of this gene implicated in nuclear type mitochondrial complex I deficiency 10. Orthologous to human NDUFAF2 (NADH:ubiquinone oxidoreductase complex assembly factor 2).

NR:

description
mimitin, mitochondrial

GO: NA

KEGG:

id description
K18160 NDUFAF2; NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043247026.1 True 1349 mRNA 0.37 4 8478681 8480731

Neighbor

gene id symbol gene type direction distance location
depdc1a depdc1a,LOC107657894,LOC107752443,LOC107599802,LOC107548279,LOC107699654,LOC107716419 coding downstream 2134 8469042 ~ 8476547 (-)
LOC122351041 rpe65,rpe65c,LOC107657893,LOC107752442,LOC107700531 coding downstream 11468 8463209 ~ 8467213 (-)
osbpl9 osbpl9,LOC107699596,LOC107657891 coding downstream 21447 8431193 ~ 8457234 (-)
LOC122351130 NA coding downstream 48907 8429694 ~ 8429774 (-)
LOC122351131 NA coding downstream 49137 8429474 ~ 8429544 (-)
rab3c rab3c,LOC107599832,LOC107700568,LOC107743864 coding upstream 120264 8600995 ~ 8606166 (-)
skia ski,skia,LOC107548407,LOC107699765,LOC107657901,LOC107599811,LOC107710903 coding upstream 266156 8746887 ~ 8808599 (-)
prkcz prkcz,LOC107710919,LOC107743854,LOC107548418 coding upstream 339625 8820356 ~ 8911987 (-)
st6galnac5b st6galnac5b,LOC107599835,LOC107657873,LOC107710911,LOC107743856,LOC107550326,LOC107700626 coding upstream 441962 8922693 ~ 8934751 (-)
LOC122350776 LOC107599836,LOC107657909,LOC107710921,LOC107743853,LOC107548462 coding upstream 492062 8972793 ~ 8975940 (-)
G62076 NA non-coding downstream 48546 8427285 ~ 8430135 (-)
LOC122351107 NA non-coding downstream 209464 8253538 ~ 8269217 (-)
G61967 NA non-coding downstream 504661 7879417 ~ 7974020 (-)
LOC122350891 NA non-coding downstream 524039 7951561 ~ 7954642 (-)
G61965 NA non-coding downstream 700117 7749703 ~ 7778564 (-)
G62120 NA non-coding upstream 27160 8507891 ~ 8508123 (-)
LOC122350893 NA non-coding upstream 231306 8712037 ~ 8739953 (-)
G62239 NA non-coding upstream 432751 8913482 ~ 8914004 (-)
G62235 NA non-coding upstream 438027 8918758 ~ 8920904 (-)
G62241 NA non-coding upstream 440750 8921481 ~ 8921696 (-)
eps15 eps15,LOC107752431,LOC107599798,LOC107743869 other downstream 62128 8392345 ~ 8416553 (-)
LOC122350139 elavl4 other downstream 245907 8117008 ~ 8232774 (-)
spata6 LOC107657881,LOC107699473,LOC107549716,LOC107757996,LOC107599047 other downstream 791119 7677496 ~ 7687562 (-)
lhx4 lhx4,LOC107699337,LOC107550233,LOC107758007,LOC107599001,LOC107755297,LOC107665078 other downstream 1375688 7091450 ~ 7102993 (-)
xpr1a xpr1a,LOC107758009,LOC107755298,LOC107699288,LOC107665065,LOC107603171,LOC107599040 other downstream 1422252 6875349 ~ 7056429 (-)
mrps36 mrps36,LOC107657871,LOC107599810,LOC107699743,LOC107743861,LOC107548364,LOC107710901 other upstream 166539 8647270 ~ 8649983 (-)
pola2 pola2,LOC107599808,LOC107657899 other upstream 171573 8652304 ~ 8657286 (-)
mindy4 LOC107699968,LOC107585839,LOC107548580 other upstream 776512 9257243 ~ 9262826 (-)
fam78bb fam78bb,LOC107717547,LOC107676968,LOC107751100,LOC107550401,LOC107585866,LOC107695225 other upstream 1219663 9700394 ~ 9708621 (-)
mllt1a mllt1a,LOC107731200,LOC107676782,LOC107695250,LOC107549968,LOC107585916 other upstream 1473950 9954681 ~ 9969485 (-)

Expression


Co-expression Network