LOC122350512


Basic Information

Item Value
gene id LOC122350512
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 1936761 ~ 1946949 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043247049.1
TAGAGAGTAGATGACTAAACGTAAATGTAATGCTACTTTAGGTAAAATAATACTACAGAATAATAAGGACTTTTATCCGAGACAGCCAAAAATTGTGTTCCTTAAGAAATAAGGAGACCtatcaaaacaaacatcatGTTGGCTCAAAGTCAGAAATAGATTTAAATGCTCTGAAGGTTTCAAATGTCAAGTTATTAGTTCCAAGAATCAGTAGAGGAAGTAGTAGTTTTACGTGGTCATGCAGTTTATCAAACATTAATCTCTGCCCAGCGCTAGaatgtaaaaggtttttttctggAGAGTAGACAGACACATGATGGATTAAAAGCAAACGGCTAACACTGGAAGAGGTCTGGCGTACCTGAACATGTAGGATGGCTCCTGCAGTTATTATCTGCTGTCTGCTCACCATTAGCTGCTGCTTAACAACGGTGACTAGCCAACCCGGCGATGCAACCTCCAGCCCTGCGTCCACTCGACCTGCAGTGACCAAGCGCAACCACCACAACCACTCCAGCTTCCCTTTCATGTCGATTGTGGCCGGTGGAAGTTGCGCGAATCCAGACCTGTGCTGTTCTGGATTGAATGACGGCTGTCACCGCTGGGATTGTTATTGCGACGTGGCTTGTCTGAGATATAAGGACTGCTGCCCTGATTTCAGATCCACCTGCCTCACAGTCAATAACAGCACCAGTGACTCTAAACCAAGCAGCACTTTGCCACTGACAGGTTCGTGTTCACACCCGGCTCTATGCTGCACCGGCTTCAACTACAGCTGTTTCAGCGGCTGTTTCTGTGACGAGGCCTGCGTAGAGCATAGTGACTGCTGTCCCGACTACAACAGTACCTGCATTTTCAGCAGCACTAGCGCACCTCCTCCGATCACCTCCACTGCAGCTCCACCAAAAGTAGTCACTGTTCTGGAGGTGAAGGTGAAGATGATGTTACCTGAAGAAGATCATCAGGCCGCTCTGCTTAAGgttGGCGCTGTGCTGGAGAGTCTCTTAAAAGGGAATAATACTGAAATCTACTCCTTTAAAGTCATGCAAATCAAACAGGTATCGCCATAGGACTGAGTCAGAAACCAGCTGAGAGGAACAGATGTGAATAAATGCTCATCACCGctcaatgtttattatattcaaccaaaaaatgtgtgtctgtgtttatgtgGGGGAATCCACTGCTGTTTTGACGTTGTCTTTATTTCTCTGATTTTGACATTTGTGTGTGATTATAATGCTGTATTTATAGGAAGAACACTTGTGAAGTAAGAAAATTTCGTGCTGCTGCTCCGTGACTTGGTTCGTTAGATGTTGCATGAATACTGAGCAACGTTTTTCTAGGAAATATGGAAAACAATGAGCAGGTTTTGACAGCTGGGGATGTTGGCCTCCAGTGTCAAGCAATGAGAAGAAAGTCTTATTTTATACCAGACTGCTTCATCAGAACCAGACACCATCGTGAGACagctttataaaataatgttctcATTGCGCCATTTTTAATTAGTTCTGACTTTTTAGGACATTTTCCCAGACTTAGAGAGCATGCTTTTATAGAAGCCCATTACTGCCACTGCAACTTTAAATGCACAGAGATCAGCTATAAAGGCAGTTGCAAGGAAAAAATGTCAGAACTCCAAGATAAACACTCTTGCAATTGCAGGGTTTaacttttaaacctttaaattaatatacaattgactttatttatttaaataccaaCTTTATAACTTCATGCTTATATCGcgaatttgattttatattccaGAATTGCTATGAACTGACagtcacaattctgagaaaagtcagaattgcaagatatattttaaatgtatatctcccaaatatgcatttatttctcataattgcaagttcatctcagtttttttgtttgttcttgcaattgtg
>XM_043247050.1
ATAGAGAGTAGATGACTAAACGTAAATGTAATGCTACTTTAGGTAAAATAATACTACAGAATAATAAGGACTTTTATCCGAGACAGCCAAAAATTGTGTTCCTTAAGAAATAAGGAGACCtatcaaaacaaacatcatGTTGGCTCAAAGTCAGAAATAGATTTAAATGCTCTGAAGGTTTCAAATGTCAAGTTATTAGTTCCAAGAATCAGTAGAGGAAGTAGTAGTTTTACGTGGTCATGCAGTTTATCAAACATTAATCTCTGCCCAGCGCTAGaatgtaaaaggtttttttctggAGAGTAGACAGACACATGATGGATTAAAAGCAAACGGCTAACACTGGAAGAGGTCTGGCGTACCTGAACATGTAGGATGGCTCCTGCAGTTATTATCTGCTGTCTGCTCACCATTAGCTGCTGCTTAACAACGGCGATTGTGGCCGGTGGAAGTTGCGCGAATCCAGACCTGTGCTGTTCTGGATTGAATGACGGCTGTCACCGCTGGGATTGTTATTGCGACGTGGCTTGTCTGAGATATAAGGACTGCTGCCCTGATTTCAGATCCACCTGCCTCACAGTCAATAACAGCACCAGTGACTCTAAACCAAGCAGCACTTTGCCACTGACAGGTTCGTGTTCACACCCGGCTCTATGCTGCACCGGCTTCAACTACAGCTGTTTCAGCGGCTGTTTCTGTGACGAGGCCTGCGTAGAGCATAGTGACTGCTGTCCCGACTACAACAGTACCTGCATTTTCAGCAGCACTAGCGCACCTCCTCCGATCACCTCCACTGCAGCTCCACCAAAAGTAGTCACTGTTCTGGAGGTGAAGGTGAAGATGATGTTACCTGAAGAAGATCATCAGGCCGCTCTGCTTAAGgttGGCGCTGTGCTGGAGAGTCTCTTAAAAGGGAATAATACTGAAATCTACTCCTTTAAAGTCATGCAAATCAAACAGGTATCGCCATAGGACTGAGTCAGAAACCAGCTGAGAGGAACAGATGTGAATAAATGCTCATCACCGctcaatgtttattatattcaaccaaaaaatgtgtgtctgtgtttatgtgGGGGAATCCACTGCTGTTTTGACGTTGTCTTTATTTCTCTGATTTTGACATTTGTGTGTGATTATAATGCTGTATTTATAGGAAGAACACTTGTGAAGTAAGAAAATTTCGTGCTGCTGCTCCGTGACTTGGTTCGTTAGATGTTGCATGAATACTGAGCAACGTTTTTCTAGGAAATATGGAAAACAATGAGCAGGTTTTGACAGCTGGGGATGTTGGCCTCCAGTGTCAAGCAATGAGAAGAAAGTCTTATTTTATACCAGACTGCTTCATCAGAACCAGACACCATCGTGAGACagctttataaaataatgttctcATTGCGCCATTTTTAATTAGTTCTGACTTTTTAGGACATTTTCCCAGACTTAGAGAGCATGCTTTTATAGAAGCCCATTACTGCCACTGCAACTTTAAATGCACAGAGATCAGCTATAAAGGCAGTTGCAAGGAAAAAATGTCAGAACTCCAAGATAAACACTCTTGCAATTGCAGGGTTTaacttttaaacctttaaattaatatacaattgactttatttatttaaataccaaCTTTATAACTTCATGCTTATATCGcgaatttgattttatattccaGAATTGCTATGAACTGACagtcacaattctgagaaaagtcagaattgcaagatatattttaaatgtatatctcccaaatatgcatttatttctcataattgcaagttcatctcagtttttttgtttgttcttgcaattgtg
>XM_043247051.1
TCATCAGGAAGCTCTTCGCTGTGAGGTTTGGATGCAAATACCCCAGAACTTTGAATGCGAGTCCAAGGCATCTGACCACAGACGGCGAggtgaaagaaagaagaagtgTTATTGAGCCTTTCAGAGGAACAGAGTTTGATGACACAGACACAACATCACAGTCTGTGAAGGTCTCCAAACCCTGGTGATCAGTTCCTGAGCTCAACCAGTGACTAGCCAACCCGGCGATGCAACCTCCAGCCCTGCGTCCACTCGACCTGCAGTGACCAAGCGCAACCACCACAACCACTCCAGCTTCCCTTTCATGTCGATTGTGGCCGGTGGAAGTTGCGCGAATCCAGACCTGTGCTGTTCTGGATTGAATGACGGCTGTCACCGCTGGGATTGTTATTGCGACGTGGCTTGTCTGAGATATAAGGACTGCTGCCCTGATTTCAGATCCACCTGCCTCACAGTCAATAACAGCACCAGTGACTCTAAACCAAGCAGCACTTTGCCACTGACAGGTTCGTGTTCACACCCGGCTCTATGCTGCACCGGCTTCAACTACAGCTGTTTCAGCGGCTGTTTCTGTGACGAGGCCTGCGTAGAGCATAGTGACTGCTGTCCCGACTACAACAGTACCTGCATTTTCAGCAGCACTAGCGCACCTCCTCCGATCACCTCCACTGCAGCTCCACCAAAAGTAGTCACTGTTCTGGAGGTGAAGGTGAAGATGATGTTACCTGAAGAAGATCATCAGGCCGCTCTGCTTAAGgttGGCGCTGTGCTGGAGAGTCTCTTAAAAGGGAATAATACTGAAATCTACTCCTTTAAAGTCATGCAAATCAAACAGGTATCGCCATAGGACTGAGTCAGAAACCAGCTGAGAGGAACAGATGTGAATAAATGCTCATCACCGctcaatgtttattatattcaaccaaaaaatgtgtgtctgtgtttatgtgGGGGAATCCACTGCTGTTTTGACGTTGTCTTTATTTCTCTGATTTTGACATTTGTGTGTGATTATAATGCTGTATTTATAGGAAGAACACTTGTGAAGTAAGAAAATTTCGTGCTGCTGCTCCGTGACTTGGTTCGTTAGATGTTGCATGAATACTGAGCAACGTTTTTCTAGGAAATATGGAAAACAATGAGCAGGTTTTGACAGCTGGGGATGTTGGCCTCCAGTGTCAAGCAATGAGAAGAAAGTCTTATTTTATACCAGACTGCTTCATCAGAACCAGACACCATCGTGAGACagctttataaaataatgttctcATTGCGCCATTTTTAATTAGTTCTGACTTTTTAGGACATTTTCCCAGACTTAGAGAGCATGCTTTTATAGAAGCCCATTACTGCCACTGCAACTTTAAATGCACAGAGATCAGCTATAAAGGCAGTTGCAAGGAAAAAATGTCAGAACTCCAAGATAAACACTCTTGCAATTGCAGGGTTTaacttttaaacctttaaattaatatacaattgactttatttatttaaataccaaCTTTATAACTTCATGCTTATATCGcgaatttgattttatattccaGAATTGCTATGAACTGACagtcacaattctgagaaaagtcagaattgcaagatatattttaaatgtatatctcccaaatatgcatttatttctcataattgcaagttcatctcagtttttttgtttgttcttgcaattgtg
>XM_043247052.1
AGTCTGCGGGAAAAAAACCCTTTGCGGTTGACTTGAAGCCTTGACTGAAATCAATGTGACTAGCCAACCCGGCGATGCAACCTCCAGCCCTGCGTCCACTCGACCTGCAGTGACCAAGCGCAACCACCACAACCACTCCAGCTTCCCTTTCATGTCGATTGTGGCCGGTGGAAGTTGCGCGAATCCAGACCTGTGCTGTTCTGGATTGAATGACGGCTGTCACCGCTGGGATTGTTATTGCGACGTGGCTTGTCTGAGATATAAGGACTGCTGCCCTGATTTCAGATCCACCTGCCTCACAGTCAATAACAGCACCAGTGACTCTAAACCAAGCAGCACTTTGCCACTGACAGGTTCGTGTTCACACCCGGCTCTATGCTGCACCGGCTTCAACTACAGCTGTTTCAGCGGCTGTTTCTGTGACGAGGCCTGCGTAGAGCATAGTGACTGCTGTCCCGACTACAACAGTACCTGCATTTTCAGCAGCACTAGCGCACCTCCTCCGATCACCTCCACTGCAGCTCCACCAAAAGTAGTCACTGTTCTGGAGGTGAAGGTGAAGATGATGTTACCTGAAGAAGATCATCAGGCCGCTCTGCTTAAGgttGGCGCTGTGCTGGAGAGTCTCTTAAAAGGGAATAATACTGAAATCTACTCCTTTAAAGTCATGCAAATCAAACAGGTATCGCCATAGGACTGAGTCAGAAACCAGCTGAGAGGAACAGATGTGAATAAATGCTCATCACCGctcaatgtttattatattcaaccaaaaaatgtgtgtctgtgtttatgtgGGGGAATCCACTGCTGTTTTGACGTTGTCTTTATTTCTCTGATTTTGACATTTGTGTGTGATTATAATGCTGTATTTATAGGAAGAACACTTGTGAAGTAAGAAAATTTCGTGCTGCTGCTCCGTGACTTGGTTCGTTAGATGTTGCATGAATACTGAGCAACGTTTTTCTAGGAAATATGGAAAACAATGAGCAGGTTTTGACAGCTGGGGATGTTGGCCTCCAGTGTCAAGCAATGAGAAGAAAGTCTTATTTTATACCAGACTGCTTCATCAGAACCAGACACCATCGTGAGACagctttataaaataatgttctcATTGCGCCATTTTTAATTAGTTCTGACTTTTTAGGACATTTTCCCAGACTTAGAGAGCATGCTTTTATAGAAGCCCATTACTGCCACTGCAACTTTAAATGCACAGAGATCAGCTATAAAGGCAGTTGCAAGGAAAAAATGTCAGAACTCCAAGATAAACACTCTTGCAATTGCAGGGTTTaacttttaaacctttaaattaatatacaattgactttatttatttaaataccaaCTTTATAACTTCATGCTTATATCGcgaatttgattttatattccaGAATTGCTATGAACTGACagtcacaattctgagaaaagtcagaattgcaagatatattttaaatgtatatctcccaaatatgcatttatttctcataattgcaagttcatctcagtttttttgtttgttcttgcaattgtg

Function

GO: NA

KEGG:

id description
ko00590 Arachidonic acid metabolism

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043247049.1 True 1913 mRNA 0.41 8 1941658 1946949
XM_043247050.1 False 1815 mRNA 0.40 7 1941657 1946949
XM_043247051.1 False 1690 mRNA 0.43 9 1936761 1946949
XM_043247052.1 False 1537 mRNA 0.42 8 1942200 1946949

Neighbor

gene id symbol gene type direction distance location
snap29 snap29,LOC107722859,LOC107560055,LOC107726963 coding upstream 109350 1822636 ~ 1827411 (+)
serpind1 serpind1,LOC107671000,LOC107738496,LOC107559590,LOC107722856,LOC107698014,LOC107560052 coding upstream 129359 1802695 ~ 1807402 (+)
LOC122350660 NA coding upstream 287143 1648478 ~ 1649618 (+)
LOC122351062 NA coding upstream 376394 1559120 ~ 1560367 (+)
LOC122350265 rasal1 coding upstream 455207 1456231 ~ 1481554 (+)
ikbkb ikbkb,LOC107671012,LOC107722850,LOC107754415 coding downstream 19634 1966583 ~ 1995859 (+)
enkd1 si:ch211-220d9.3,enkd1,LOC107754420,LOC107699630,LOC107657207,LOC107670972 coding downstream 59135 2006084 ~ 2014684 (+)
mrpl40 LOC107753002,LOC107559600,LOC107699643,LOC107560058,LOC107754402,LOC107671004 coding downstream 108382 2055331 ~ 2058725 (+)
gle1 gle1,LOC107671035,LOC107699671,LOC107754403 coding downstream 114592 2061541 ~ 2069288 (+)
si:ch211-51h9.7 NA coding downstream 122869 2069818 ~ 2071669 (+)
G60258 NA non-coding upstream 25594 1908528 ~ 1911167 (+)
G60248 NA non-coding upstream 50322 1885248 ~ 1886439 (+)
G59974 NA non-coding upstream 110925 1755120 ~ 1825836 (+)
G59982 NA non-coding upstream 134675 1800305 ~ 1802086 (+)
G59969 NA non-coding upstream 154224 1729067 ~ 1782537 (+)
G60265 NA non-coding downstream 199 1947148 ~ 1950296 (+)
G60269 NA non-coding downstream 5844 1952793 ~ 1953126 (+)
G60281 vdac3,LOC107671013,LOC107559564 non-coding downstream 20171 1967120 ~ 1999468 (+)
G60288 NA non-coding downstream 53812 2000761 ~ 2003003 (+)
LOC122350140 NA non-coding downstream 77613 2024562 ~ 2027328 (+)
G60259 LOC107560031,LOC107559593,LOC108412499,LOC107754396 other upstream 18390 1915460 ~ 1918371 (+)
pggt1b pggt1b other upstream 717957 1210815 ~ 1218804 (+)
znf608 znf608,LOC107574328,LOC107697597,LOC107712568,LOC107704598,LOC107573349,LOC107726216 other upstream 1084757 842077 ~ 852004 (+)
G59807 NA other upstream 1131922 803653 ~ 804839 (+)
cdc14b cdc14b,LOC107661524,LOC107704583,LOC107568104,LOC107726879,LOC107570987 other upstream 1386074 537775 ~ 550687 (+)
polb polb,LOC107670984,LOC107722860 other downstream 67910 2014859 ~ 2020034 (+)
LOC122350053 NA other downstream 83875 2030824 ~ 2035980 (+)
LOC122350758 dynll1,dynll2a,LOC103397138,LOC100698873,LOC107559583 other downstream 90750 2037699 ~ 2039836 (+)
G60788 lhfpl4b,LOC107584928,LOC107674308,LOC107743140,LOC107727430,LOC107701811,LOC103032126,LOC105898894 other downstream 1901665 3848614 ~ 3850557 (+)
LOC122350109 LOC107743114,LOC107552217,LOC107674346 other downstream 1977912 3924861 ~ 3931488 (+)

Expression


Co-expression Network