pym1 (LOC107701384)


Basic Information

Item Value
gene id pym1
gene name LOC107701384
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 1250060 ~ 1252516 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043247080.1
GATAGCGGCACTGAGCGGAAACGGAAGTTAGTCTTTGTTAAAGATGGCAACCCCCTATGTGACAGATGAATCTGgtaaATACATCGCCGCCACGCAGCGTCCGGACGGCACGTGGAGGAAGCCTCGGCGGGTGAAGGACGGATATGTTCCTCAGGAGGAGGTACCGGTCTATGAGAACAAGTACGTCAAGTTCTTCAAGAGCAAACCCGAGCTGCCCCCCGGCATGAGCCCCGAGGACGCCAGCTCCGGAGAGAAACAGAGCGACGCCGCCGGACTCTCCAGAACCGCCAAACGCAACATGAAGCGCAAAGAAAAGCGCAAGCAGCAGAGCCAGAGCCAGCCGGAGGACGTGAAGACCCTGAGCGCAGAACTGGAGCACATCGACCTCGCCGCCGAGGAGAAGACCGCCAGCGACCCGAACGAGAAGGCCAAGAAGTTGAAGAACCTGCGCAAGAAGCTGAGGCAGGTGGAGGAGCTCCAGCAGAAGGTGGACTCTGGAGAGCTGAAGAACCCCAGCAAAGAGCAGCTGGACAAACTGGGCCGGGGCCAGGCCTTACGAGACGAGCTGAGGCTGCTGGAGGCCGATCTGTGACCACGTCCGGCCTGCTcttgtgttttatatacatCATGAAGAAACACGCGGCGTCTAGTGCTCAGGACTCTAGATGCGGGTCGTCCAGAACTCGCAGGAGCGCAGACGCCACGCCACTCTCTGTGATAGATTAGAGACTGATGGACCGTGGcctcattgtgttttttttaccacCGTAGAGCGTAACGGCATGAGATTATTACGTGTAGACTTGTGTTATATTAAACATAGCATAACGATGTCCCAGTGTTTTACTGCTCCGTTCATATCATCTAGAGTATTACAGTAActgatgttttaatgaaatgatcaaccgtgttaaaaaaaaccaaacacatgcagccttgatgaagaCCAGTAGAGTTCTGTGCCCTTGTATGAGTTAGTGTCTTATTTCTATTCAACGATTAAGCGCAGCCAagaataaagtttttgtttaca
>XM_043247081.1
GATAGCGGCACTGAGCGGAAACGGAAGTTAGTCTTTGTTAAAGATGGCAACCCCCTATGTGACAGATGAATCTGgtaaATACATCGCCGCCACGCAGCGTCCGGACGGCACGTGGAGGAAGCCTCGGCGGGTGAAGGACGGATATGTTCCTCAGGAGGAGCTATGAGAACAAGTACGTCAAGTTCTTCAAGAGCAAACCCGAGCTGCCCCCCGGCATGAGCCCCGAGGACGCCAGCTCCGGAGAGAAACAGAGCGACGCCGCCGGACTCTCCAGAACCGCCAAACGCAACATGAAGCGCAAAGAAAAGCGCAAGCAGCAGAGCCAGAGCCAGCCGGAGGACGTGAAGACCCTGAGCGCAGAACTGGAGCACATCGACCTCGCCGCCGAGGAGAAGACCGCCAGCGACCCGAACGAGAAGGCCAAGAAGTTGAAGAACCTGCGCAAGAAGCTGAGGCAGGTGGAGGAGCTCCAGCAGAAGGTGGACTCTGGAGAGCTGAAGAACCCCAGCAAAGAGCAGCTGGACAAACTGGGCCGGGGCCAGGCCTTACGAGACGAGCTGAGGCTGCTGGAGGCCGATCTGTGACCACGTCCGGCCTGCTcttgtgttttatatacatCATGAAGAAACACGCGGCGTCTAGTGCTCAGGACTCTAGATGCGGGTCGTCCAGAACTCGCAGGAGCGCAGACGCCACGCCACTCTCTGTGATAGATTAGAGACTGATGGACCGTGGcctcattgtgttttttttaccacCGTAGAGCGTAACGGCATGAGATTATTACGTGTAGACTTGTGTTATATTAAACATAGCATAACGATGTCCCAGTGTTTTACTGCTCCGTTCATATCATCTAGAGTATTACAGTAActgatgttttaatgaaatgatcaaccgtgttaaaaaaaaccaaacacatgcagccttgatgaagaCCAGTAGAGTTCTGTGCCCTTGTATGAGTTAGTGTCTTATTTCTATTCAACGATTAAGCGCAGCCAagaataaagtttttgtttaca

Function

NR:

description
PREDICTED: partner of Y14 and mago A-like

GO: NA

KEGG:

id description
K14294 WIBG, PYM; partner of Y14 and mago

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043247080.1 True 1033 mRNA 0.52 3 1250060 1252516
XM_043247081.1 False 1025 mRNA 0.52 3 1250060 1252516

Neighbor

gene id symbol gene type direction distance location
LOC122350094 NA coding downstream 1696 1244834 ~ 1248364 (-)
ap3s1 ap3s1,LOC107661175,LOC107566394,LOC107729057 coding downstream 81603 1160400 ~ 1168457 (-)
dmxl1 dmxl1,LOC107571775,LOC107663590,LOC107704574 coding downstream 192133 1016890 ~ 1057927 (-)
prr16 LOC107713553 coding downstream 245647 998648 ~ 1004413 (-)
LOC122350790 lox,LOC107726222,LOC107704580 coding downstream 261500 981634 ~ 988560 (-)
LOC122350264 dgcr6,LOC107572069,LOC107721026,LOC105899531 coding upstream 194484 1447000 ~ 1454530 (-)
dtx1 dtx1,LOC107692206,LOC107671029 coding upstream 241989 1494505 ~ 1523464 (-)
LOC122350659 NA coding upstream 375137 1627653 ~ 1646362 (-)
LOC122349997 NA coding upstream 457842 1710358 ~ 1714221 (-)
LOC122350661 NA coding upstream 519466 1771982 ~ 1777474 (-)
G60170 NA non-coding downstream 31258 1214307 ~ 1218802 (-)
G60154 NA non-coding downstream 65411 1184308 ~ 1184649 (-)
G60153 NA non-coding downstream 127827 1120928 ~ 1122233 (-)
G60133 NA non-coding downstream 184860 1064397 ~ 1065200 (-)
G60131 NA non-coding downstream 187822 1061093 ~ 1062238 (-)
G60166 LOC107701385,LOC107573793,LOC107749411,LOC107572966,LOC107728257,LOC107661167 non-coding upstream 12083 1264599 ~ 1266232 (-)
G60187 NA non-coding upstream 16282 1268798 ~ 1269384 (-)
G60188 NA non-coding upstream 26484 1279000 ~ 1279303 (-)
G60189 NA non-coding upstream 59369 1311885 ~ 1312144 (-)
G60192 NA non-coding upstream 99451 1351967 ~ 1449930 (-)
commd10 commd10,LOC107728250,LOC107663591 other downstream 90774 1140698 ~ 1159286 (-)
G60098 NA other downstream 111908 1135401 ~ 1138152 (-)
csgalnact1b LOC107712620 other downstream 510688 732793 ~ 739372 (-)
LOC122349987 LOC107661519,LOC107712504,LOC107726877,LOC107704593,LOC107573347,LOC794598 other downstream 518216 723145 ~ 731844 (-)
ccl27a NA other downstream 679087 565886 ~ 570973 (-)
LOC122350266 dgcr6,LOC107572069,LOC107721026,LOC105899531,LOC103029434 other upstream 96655 1349171 ~ 1356953 (-)
LOC122350657 pi4ka,pi4kab,LOC107671001,LOC108440297,LOC107698013,LOC107722847,LOC107559589 other upstream 309030 1561546 ~ 1606609 (-)
G60220 NA other upstream 324289 1576805 ~ 1580616 (-)
pi4kab pi4ka,LOC107574565,LOC107671001,LOC107722847,LOC108440297 other upstream 480348 1732864 ~ 1821650 (-)
LOC122349998 sh3glb2b,LOC107748508,LOC107681863 other upstream 496546 1749062 ~ 1762549 (-)

Expression


Co-expression Network