wdr13 (wdr13,LOC107584863,LOC107552201)


Basic Information

Item Value
gene id wdr13
gene name wdr13,LOC107584863,LOC107552201
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 3669693 ~ 3676628 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043247092.1
TCAGCTGTTGGAAGGGCGGGCCGGTCACGTGATCGCGCCAGTCCCTTCAGACAGAATGAACCGGTGAGAGTCTCGCACGCCCTTGTGTTTCCTGCATCTCTTTGTGTCTGTGGATCTCATGGCTGCTGTTTGGCAGCAGGTGCTGGCAGTGGACGCAAGGTACAATGCTTACCGCACACCTACGTTCCCCCAGTTCCGCACGCAGTACATCCGCCGGCGCAGCCAGCTGCTCCGTGAGAATGCCAAGTGTGGCTTTGAGCCGGGGCTGCGCAGGCAGTATCTGCGTCTGCGCAGTCAGTTGCTCGCCCTGCGTTACGGGCCTCTGTCAGAGCAGAGCAGCTTCAGAGCCAGCAGTGTGCGCAGTTCCCGCACTACACTGGATCGCATGGAGGACTTCGAGGAGGATCCCAGGGCTCAGGGCGCCAGAGGCCACAGGAGATCAGTAAGTCGCGGGTCATACCAGCTGCAAGCCCAGATGAACAGGGCGGTCTATGATGAAAGGCCTCCAGGTAGCCTGGTGCCCACGTCGGTGGCAGAAGCCAGTCGGGCCATGGCGGGTGACACCACCCTCAGTGAGAACTACGCCTTTGCCGGCATGCACCACATCTTTGACCAGCATGTCGACTCAGCTGTTCCTCGATTACAGTTTGCCAATGACGATAAACACCTCCTTGCCTGCTGCTCGCTGGACGGGACGTTGTCAATCATGACGCTGTCCCCGCCTCCACCAACTGTAAAGGTGACACTAAAGGGCCATGCCGGTCCGGTGACTGACTTCGCCTGGTCGCTCAGCAACGACATCATTGTGTCCACCTCAAAAGACGGCACTCTGCGCATCTGGAACACAGAGGATGGACGCTGCATCCGAGAGGTGGCCGACCCAGAGGGCAGCGAGCTGCTGTGCTGCACTTTTCAGCCCATGAACAACAACCTGACTGTGGTTGGCAACAGTAAACACCACCTGCAGGTGGTGAACATCTCCACTGGGAAGAAAGTGAAAGGAGGCTCCAGTAAACTCACCGGCCGAGTGCTTTCTCTCTCGTTTGATGCTCCTGGGAGAATCCTGTGGGCTGGTGATGACAGGGGAAGCATTTTCTCCTTCCTTTTTGACATGGCCACGGGAAAACTGACCAAAGCTAAGAGACTGGTGGTGAATGAGGGCAGCCCTATCTCCAGCATCTCAGCCCGCTCGTGGATCAGTCGAGAGGCACGGGATCCGTCTCTGCTCGTCAACGCCTGTGTCAACAAACTACTGCTCTACAGGGTCGTAGATAATGAAGGGACTCTACAGCTGAAGAGGAGTTTCCCCATTCAACACGGATCCCAACCTCTGCACAGCATCTTCTGTCCTCTCATGTCCTTCAGACAGGGAGCCTGTGTTGTCACTGGCAGTGAGGATGCGTGTGTCTACTTTTTCGATGTTGAACGCAACACTAAGGCCATCGTTAACAAGCTGCAGGGCCACAGCGGGCCTGTCCTGGATGTGAGCTTCAATTGCGACGAAAGCCTGCTGGCCTCCTCTGATGCCACAGGAATGGTGATCATCTGGAGACGAGAGCAGAAGTAACCACGGCAACTCCAAGCTTTCGCTACCTTGGCAACAGCATCTTCCATGCAGGCTGGCTCGAATCACGTGCAATGAAACTCCTACTGTAAATGTCAAGATGactgttgtgttttgagtgagTCTGAACCAAATCATGTTGACCATGAATGAAATTTGTGTCTTATCTTTGATTTAGGgctgatgtttctgtttttgttggttTCGTGGGACGTGGCGCTTGTTTGTGAAGAAATTATTAGTGCTTTGTGGTCATAAATGTGCAACTTAAAGAGAGGAGATGttaatataatactttattCACCTTTGTGCATTGTGTGTCTTAGTGAAAGAGTGTGAGAATGAGAATGTTGAGTCTGCGTGTCACTGAAGTTGCGTTCGCTTGCACAATAACACTACTGTATTTATGCCTTGTTGAACTCAATAAATTTAATCACACTAGCTGAATTAAGCTA

Function

symbol description
wdr13 Orthologous to human WDR13 (WD repeat domain 13).

NR:

description
PREDICTED: WD repeat-containing protein 13 isoform X1

GO: NA

KEGG:

id description
K24739 WDR13; WD repeat-containing protein 13

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043247092.1 True 2019 mRNA 0.53 10 3669693 3676628

Neighbor

gene id symbol gene type direction distance location
asb6 asb6,LOC107696906,LOC107674328,LOC107584902 coding downstream 355 3665914 ~ 3669338 (-)
si:ch211-255g12.8 NA coding downstream 4504 3658184 ~ 3665189 (-)
neflb neflb,LOC107696905,LOC107552169,LOC107751592,LOC107674275,LOC107714547,LOC107576924 coding downstream 11649 3654752 ~ 3658044 (-)
dock5 dock5,LOC107674342,LOC107714571,LOC107696915,LOC107713013 coding downstream 33499 3583344 ~ 3636194 (-)
LOC122351051 lrrtm4,LOC107713029,LOC107552197,LOC107671041,LOC107714573,LOC108413329,LOC107694817,LOC107560276 coding downstream 293511 3209091 ~ 3376182 (-)
si:ch73-233m11.2 LOC107674326,LOC107714544,LOC107580288 coding upstream 34989 3711617 ~ 3719423 (-)
si:dkey-222n6.2 LOC107751587,LOC107696908,LOC107552203 coding upstream 44006 3720634 ~ 3725257 (-)
grip2a grip2a,LOC107751584,LOC107696921,LOC107714565,LOC107584908,LOC107552207 coding upstream 89926 3766554 ~ 3800174 (-)
hdac6 hdac6,LOC107743106,LOC107701824,LOC107584872,LOC107552211,LOC107727426,LOC107674364 coding upstream 174866 3851494 ~ 3864352 (-)
gata1b LOC107552162,LOC107743132,LOC107701810 coding upstream 190852 3867480 ~ 3873578 (-)
G60729 NA non-coding downstream 89732 3579561 ~ 3579961 (-)
G60722 LOC107696914,LOC107713026,LOC107552198,LOC107584864,LOC107674302,LOC107714559 non-coding downstream 99883 3567816 ~ 3569810 (-)
G60721 NA non-coding downstream 104756 3563532 ~ 3564937 (-)
G60720 NA non-coding downstream 106620 3562592 ~ 3563073 (-)
G60719 NA non-coding downstream 108275 3561009 ~ 3561418 (-)
G60822 NA non-coding upstream 622 3677250 ~ 3681766 (-)
G60830 NA non-coding upstream 28104 3704732 ~ 3706306 (-)
G60839 NA non-coding upstream 56707 3733335 ~ 3734195 (-)
G60850 NA non-coding upstream 85825 3762453 ~ 3765083 (-)
G60858 NA non-coding upstream 154858 3831486 ~ 3852802 (-)
G60679 adra1aa,LOC107553034,LOC107699645,LOC107713032,LOC107671010,LOC107552152 other downstream 634601 3032467 ~ 3035092 (-)
rad9b LOC105891618,LOC107713043,LOC107671006,LOC107552191,LOC107714555 other downstream 845867 2782620 ~ 2823826 (-)
bicdl1 bicdl1,LOC107553048 other downstream 1117506 2521214 ~ 2552187 (-)
G60564 pxnb other downstream 1205322 2460931 ~ 2464371 (-)
LOC122351111 LOC107568007,LOC107754426,LOC107670998,LOC107699638,LOC107560048,LOC107753005,LOC105014160 other downstream 1507690 2131369 ~ 2162003 (-)
lhfpl4b lhfpl4b,LOC107584928,LOC107674308,LOC107727430,LOC107743140,LOC107701811,LOC107552174,LOC103032126,LOC108440531 other upstream 168825 3845453 ~ 3850590 (-)
zgc:113363 LOC107743117,LOC107701819,LOC107727412,LOC107584929 other upstream 323703 4000331 ~ 4006806 (-)
G60967 LOC107674359,LOC107701814,LOC107727428,LOC107743108,LOC107552221 other upstream 412096 4088724 ~ 4092157 (-)
G61023 NA other upstream 624364 4300992 ~ 4307499 (-)
G61071 LOC107601747,LOC107653424,LOC107734537,LOC107674377,LOC107578221 other upstream 716585 4393213 ~ 4397074 (-)

Expression


Co-expression Network