LOC122350539 (sult1st3,LOC107727992,LOC107687125,LOC107687124,LOC107594958,LOC107738928,LOC107727989)


Basic Information

Item Value
gene id LOC122350539
gene name sult1st3,LOC107727992,LOC107687125,LOC107687124,LOC107594958,LOC107738928,LOC107727989
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 23956048 ~ 23963140 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043247101.1
CCTTTTGTATTACTTTTACTGTCAGAACTTACATAACCAGTTTGAGGTTGCGTACAAAGTACAttgtgagagacagacagagagaagtagagagGAATAGGCACGGTTAGAGGgaagaagaataaaataagCTACAAGCTACAAGAAACAtttgaagagagaaaaaacaaggAGCAACATAAGtgaaaaaagataaagaaaacaacGGCATAATGGAAAACCTTGACTCTTTGCTAATGAAACCACTTAATCGGCCTGAACTGTTTGATTTTGAGGGTGTTTCTATGGTTCACTACTTCACTGACAACTGGGAAAAGGTAAAAAACTTTCAAGCAAGACCTGATGACATTCTAATTGCCACTTATCCCAAAGCAGGTACCACCTGGGTGTCATATATTCTAGACCTTCTGTACTTTGGTAACGATGCTCCAGACCGCCAGACATCCGAACCTATCTATATGAGAGTGCCGTTCTTGgagtcatgttttaaaatgatacctTCAGGAACAGAACTGGCTGATAATCTGCTCACTTCTCCTCGCATCATTAAAACTCATTTACCTGTTCAGTTTGTGCCAAAGTCTTTCTGGGATCAAAACTCAAAGATTGTGTATGTAGCTCGGAATGCAAAAGACAATGCAGTTTCTTATTATCATTTTGACCGAATGAACCTGGTACAGCCTGACCCAGGAGACTGGAATACCTTCTTACAGAAATTTATGGAAGGAAAGAATGTGTTTGGCTCTTGGTATGACCATGTCAGTGGATGGTGGGAGAAAAAGCAGACTTTTTCAAACCTAATATACTTGTTCTATGAGGATTTGGTGGAAGACACAGGACGTGAGTTGGAACATTTGTGTTCCTTCTTGGGTTTGTCAACTTCAGttgaagagagggagaaaattACAAAAGGGGTTCATTTTGATGCcatgaaacagaacaaaatgacCAACTATTCCACTCTCCCAGTCATGGACTTCAAAATCTCACCCTTCATGAGGAAAGGTAAAGTTGGAGACTGGAAAAATCATTTCACTGTGATGCAAAATGAGCAGTTTGACGAGGTCTACAAACAGAAGATGAAGAACTCCACTGTCAAGTTCCGCACTGAGATCTAATACTAGGGAATTCTGAAGtactaactaaaaaaatttacttttaaaattaatgtcccaatgaaatcaaaattgtttaaaatcaaaattgagtataatgttttttcccccttttagTAGGAATATTTTAGCCATAAGGATATCTTTAAGCTGGTGTGCTCTGAAATACTTATTATAGTTATGACTATAAATGATAATTTACCACTCATTTATGTTATGTATGGTCAATAGCACATTGTAACATTGCAGCATTGCAGCAACGTATGCATATCCTATGCATTATAAACAACAGTGATGAGGAGAATCATCTGTAAGTGTGAGTGGAATGTATGTTAGTCTGAATATGAACTGGTCAATCATCcagtctgtttatttgtttgtttttaaattctgttaatTGGTGATCTGTATGCCCAGTGCATCTCATATTAACAGAaaactttaatacatttatcgGGGGAATAACATTAGTTCAGTGTACCTTTTCTAATGAAACTGTGAAACATGCTCATTAACCGATAAAA
>XM_043247103.1
ATGAAACCACTTAATCGGCCTGAACTGTTTGATTTTGAGGGTGTTTCTATGGTTCACTACTTCACTGACAACTGGGAAAAGGTAAAAAACTTTCAAGCAAGACCTGATGACATTCTAATTGCCACTTATCCCAAAGCAGgtaaaattttaatatagttttttgtgACTTCGGATTTCCATATTCCATATTTCCTCTGAGGTACAACCTATGTGATTCGCTTAGATCagatttaattgaataatttgACAGTTAGCCTTAAGTGTAAATTGTTGTATTATGCTGATACTCACAAATATAATGCtcagttaactgaaataatagAATGAAGTATGCAGCCTACAAATGTGTCCTCCGGAGAATGCAGCCTTCTGTTTGAGAAATTACCATACACCCAATGGCTAAACAATTCCCATAATGCACTTTGAGAGCCATGGTCCGAATGAATTCCCGCGTCTCTCCAGAAGATGGCGCCTGCAGCTGAATAATTTTacaacatacaaatataatattacaatatacaaatataatattaataatgttatctttgaataatattactGTTGAAGGCAGACGGCAAgacgtctttcatactttcTTGCACCTTGACAGTGGCAATTGTTTGgctattttcttcaaaaatatcatCGAAAATAAGACTTTTActggtttagaatgacatgggAGTAATGGATTatgagtaaccctttaatactGAACATCACTTTATGTATTTGTACCACCTGGGTGTCATATATTCTAGACCTTCTGTACTTTGGTAACGATGCTCCAGACCGCCAGACATCCGAACCTATCTATATGAGAGTGCCGTTCTTGgagtcatgttttaaaatgatacctTCAGGAACAGAACTGGCTGATAATCTGCTCACTTCTCCTCGCATCATTAAAACTCATTTACCTGTTCAGTTTGTGCCAAAGTCTTTCTGGGATCAAAACTCAAAGATTGTGTATGTAGCTCGGAATGCAAAAGACAATGCAGTTTCTTATTATCATTTTGACCGAATGAACCTGGTACAGCCTGACCCAGGAGACTGGAATACCTTCTTACAGAAATTTATGGAAGGAAAGAATGTGTTTGGCTCTTGGTATGACCATGTCAGTGGATGGTGGGAGAAAAAGCAGACTTTTTCAAACCTAATATACTTGTTCTATGAGGATTTGGTGGAAGACACAGGACGTGAGTTGGAACATTTGTGTTCCTTCTTGGGTTTGTCAACTTCAGttgaagagagggagaaaattACAAAAGGGGTTCATTTTGATGCcatgaaacagaacaaaatgacCAACTATTCCACTCTCCCAGTCATGGACTTCAAAATCTCACCCTTCATGAGGAAAGGTAAAGTTGGAGACTGGAAAAATCATTTCACTGTGATGCAAAATGAGCAGTTTGACGAGGTCTACAAACAGAAGATGAAGAACTCCACTGTCAAGTTCCGCACTGAGATCTAATACTAGGGAATTCTGAAGtactaactaaaaaaatttacttttaaaattaatgtcccaatgaaatcaaaattgtttaaaatcaaaattgagtataatgttttttcccccttttagTAGGAATATTTTAGCCATAAGGATATCTTTAAGCTGGTGTGCTCTGAAATACTTATTATAGTTATGACTATAAATGATAATTTACCACTCATTTATGTTATGTATGGTCAATAGCACATTGTAACATTGCAGCATTGCAGCAACGTATGCATATCCTATGCATTATAAACAACAGTGATGAGGAGAATCATCTGTAAGTGTGAGTGGAATGTATGTTAGTCTGAATATGAACTGGTCAATCATCcagtctgtttatttgtttgtttttaaattctgttaatTGGTGATCTGTATGCCCAGTGCATCTCATATTAACAGAaaactttaatacatttatcgGGGGAATAACATTAGTTCAGTGTACCTTTTCTAATGAAACTGTGAAACATGCTCATTAACCGATAAAA

Function

symbol description
sult1st3 Enables sulfotransferase activity. Involved in xenobiotic metabolic process. Predicted to be active in cytoplasm. Human ortholog(s) of this gene implicated in several diseases, including breast cancer; gastrointestinal system cancer (multiple); lung cancer (multiple); reproductive organ cancer (multiple); and urinary bladder cancer. Orthologous to human SULT1A1 (sulfotransferase family 1A member 1).

NR:

description
PREDICTED: cytosolic sulfotransferase 3 isoform X1

GO:

id name namespace
GO:0008210 estrogen metabolic process biological_process
GO:0006805 xenobiotic metabolic process biological_process
GO:0006584 catecholamine metabolic process biological_process
GO:0005737 cytoplasm cellular_component
GO:0004304 estrone sulfotransferase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043247101.1 False 1639 mRNA 0.37 8 23956048 23963140
XM_043247103.1 True 1998 mRNA 0.36 8 23957910 23963140

Neighbor

gene id symbol gene type direction distance location
LOC122351094 sult1st3,LOC107727994,LOC107594958,LOC107727992,LOC107687124,LOC107687147,LOC107687125 coding upstream 2458 23942761 ~ 23953590 (+)
LOC122350978 gpr153,LOC107687122,LOC107693426 coding upstream 55973 23871236 ~ 23900075 (+)
LOC122350042 acot7 coding upstream 91133 23828666 ~ 23864915 (+)
hes2.2 LOC107595804,LOC107748990,LOC107687144,LOC107734829 coding upstream 203617 23750246 ~ 23752431 (+)
hes2.1 hes2.1,LOC107748974,LOC107687139,LOC107577158 coding upstream 214817 23740350 ~ 23741231 (+)
LOC122350362 LOC107687124,LOC107727989,LOC107594958,LOC107727992,LOC107687125 coding downstream 4385 23967525 ~ 23972075 (+)
qars1 qars,LOC107727984,LOC107738933 coding downstream 31797 23994937 ~ 24007734 (+)
mtor mtor,LOC107564227,LOC107727986,LOC107594963 coding downstream 51007 24014147 ~ 24113382 (+)
LOC122350145 NA non-coding upstream 274216 23676434 ~ 23681832 (+)
G66418 LOC107748960,LOC107687117,LOC107691060,LOC107595771,LOC107602461,LOC107755278 non-coding upstream 332577 23620927 ~ 23623471 (+)
G66416 NA non-coding upstream 339366 23615216 ~ 23616682 (+)
G66351 NA non-coding upstream 521015 23434118 ~ 23435033 (+)
G66350 NA non-coding upstream 522303 23432809 ~ 23433745 (+)
acot7 acot7,LOC107754737,LOC107687121,LOC107693425 other upstream 151999 23752568 ~ 23804049 (+)
ndufa7 ndufa7,LOC107748992,LOC107755274 other upstream 321983 23632350 ~ 23634065 (+)
LOC122350936 LOC107710771,LOC106926566,LOC107691064 other upstream 545487 23403713 ~ 23410561 (+)
prdm16 prdm16,si:ch211-263k4.2 other upstream 554486 23054616 ~ 23401562 (+)
mfn2 mfn2,LOC107748965,LOC107602467,LOC107710790,LOC107678429,LOC107698839,LOC107595787 other upstream 968886 22973995 ~ 22987162 (+)

Expression


Co-expression Network