ipo11 (ipo11)


Basic Information

Item Value
gene id ipo11
gene name ipo11
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 15026090 ~ 15146427 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043247120.1
GTCATTTCAGTGCGACAGGAGGCACTGTGGATGGCGCCATCCTCACAACGTGCGCGCTGTGTTTAGAGCCGACTGCGAACTGTTTTGATCTCACCCGGCATTGACATATTTGCGGAAGCTTTACCTAATGGACATCCAGAGCGCCAGCTCAGTGGTGCTGCAGGCTTTGACCCAGGCCACCAGTCAGGACACAGCTGTGCTGAAGCCTGCGGAGGAGCAGCTTCGCCAATGGGAGACCCAGCCTGGCTTCTACTCGGTGCTGCTGAGCATCTTCAATAATCACATGCTGGACGTCAATGTGAGGTGGCTAGCTGTCCTTTATTTCAAGAATGGTATTGATCGCTACTGGAGAAGAGTTGCACCCCATGCTCTCTCAGAAGAAGAGAAGTCATCTCTCCGTGCTGGACTCATCACTAATTTTAACGAGCCGGTCAACCAGATCGCCACACAGATAGCAGTGCTGATCGCTAAGGTGGCGCGTCTGGACTGTCCTCGGCAGTGGCCCGAGCTCATCCCTATTCTGCTGGAGTCTGTGAAAGTTCAGGACAGCCTTCAGCAGCACCGAGCCCTGCTCACCTTCTACCACGTCACCAAGACTCTGGCCTCCAAACGCCTCGCCACTGATCGGAGACTCTTTCAGGATctggcGTCAAGCATCTATAGTTTCGCTTGCTCTCTGTGGAATCATCACACGGACACATTCCTACAGCAGATCTACGCAGGAGACCAACAGGCTGCTCTTAGCTCCCTGGAGCGTACTCTGCTCTCTTTgaaagTTCTTCGGAAGCTTACTGTGCATGGATTCATTGAGCCGCATAACAACATGGAAGTCATGGGCTTCCTCAATGCTGTCTTTGAGCGGCTAAAGCAGTTTCTAGAATGCTGTCGACAAGTTGGACCAGGCAGTCCTTGCAGAGAAAAGCTTGAGAAGACCATCATTTTGTTCACCAAAGTTCTCCTGGACTTCCTGGAATATCACCCGTGGCCTTTCATCCCTCTCATTCAACGTTCGCTGGAGTTTGCGGTCAGCTACGTTTTCACCGAGGTTGGCGAGGGAGTTGTTTTCGAGCGTTTTATTGTACAGTGCATGAACCTCATCAAGATGATCGTGAAAAACGATGCCTACAAACCTGCCAAGAACATTGAAGACAGTAAGCCAGAGAGTCTGGAGGCACATAAAATTAAGACTGCTTTCTTTACACACCAAACGCTGACGGAGATTGGCAGGAGACTGGTGTCCAAATACTTTCTGCTGACAGAAGAAGAGCTAACCATGTGGGAAGAAGACCCAGAGAGTTTTGctGTGGAAGAGACAGGCGGTGACTCCTGGAAGTATAGTTTGCGGCCGTGTACAGAAGTGCTTTTCTTGGACATTTTCCACAACTACAGTCAAACGTTGACACCAGTGCTTCTAGAGATGGTGCAGAATCTTCAAGgcCCCAGTAATGTGGAGGACCCAGTGCAGATGCTCATGAAGGATGCAGtatacAATGCTGTGGGTTTAGCTGCTTATGAATTATTTGACAATGTAGACTTTGATCAGTGGTTCAAGAACCAACTCCTCGGGGAGCTACAAGTCAGCCATAACAGatacaAGTTGATCAGAAGGCGGGTGATCTGGCTGATTGGACAGTGGATCTCAGTGAAGTTCAAGCCAGATCTGCGGCCCCTGCTATATGAAGTCATCCTCAGTCTCATGCAGGACCCTGACCTTGTGGTTCGCATTGAAACAGCCACAACTCTAAAGCTGGCCGTGGATGACTTCGAGTTCAGAACCGAGCAGTTCTTACCGtACTTGGAGTCCATATTCGGCCTGTTGTTCCAGCTGTTGCAACAGGTCAACGAATGCGACACCAAAATGCAAGTTCTCCACGTTATTTCCTGCGTCATCGAGAGAGTCAGCATCCAGATTCGACCGTACGTGGGCTGCTTGGTTCAGTACCTTCCTCTTCTTTGGAAGCAGTCTGAAGAACACAACATGCTCCGCTGTGCCATCCTCACCACCCTCATCCATCTCGTACAGGGCCTGGGAGCGGACAGCAAGAATCTGTATCCCTTCCTCCTACCTGTTATCCAGCTCAGCACAGATGTTTCTCAGCCCCCTCATGTTTACCTGCTGGAAGACGGTCTGGAGCTGTGGTTGGTGACTTTAGAGAACAGCCCTGCCATCACACCTGAGCTTCTGAGGATCTTCCAGAATATGTCTGCCCTACTTGAACTGAGCTCGGAGAACGTGCGCACGTGCTTTCAGATCATCAATGCCTACATTTATCTCTCGGCTACAGATTTCTTACAGAACTATGCTGAAGCCCTTTGCAGATCTTTCTGTGAACTGCTGAGAGACATCACCACAGAAGGCCAAGTCCAGGTTCTGAAGGTTGTTGAAATTGCCGTAAAAGTCAGTCCTATATTGGGCTCCCACATGTTTCAGCCTCTTCTGCCAGCTGTGTTACGGGGGATAGTCGAAGGCGAAAGGTATCCTGTGGTTATGTCGACATACCTGGGTGTGACGGGTCGGATTCTCCTGCAGAATTCAGGCTTCTTCACATCGCTTCTCACTCAAATGGCTCCGGAATTCAACCAGGAGGCAGACCAGCTCTTGGGGAATATGATTGAGATGTGGGTGGACCGCATGGACAACATCACCCAGCCTGAGAGGAGAAAGCTCTCTGCCCTGGCGCTCATGTCGCTTTTACCGTCTGACAACAGCGTGATCCAAGACAAGTTCTGTGGGATCATTAACATCAGCGTGGAAGCGCTGCACGATGTTATGACGGAAGACCCTGAGACGGCTACCTTCAAGGACTGCATGCTGATGAGCCACTTTGAAGAGCCAAAGCTGACAGATGATGAGGAACCCCCAACAGAACAGGACAAGAGGAGGAAACTGCTGGCTCTTGAAGACCCTGTGCACAGCATCTCTCTTCAGCAGTTTGTCTACGAGAAGCTGAAGGCTCAGCAGATGTTGATGGGGGACCAGAGCTTTCAGGCTCTCATGGAGACTGTGGACACGGAGATCGTGCGCCAGCTGCAAGAGTTCATCCACGGCATGTGAGGAGGAGACGACAGCAGACCGTTCGATCCTCTGAGGCCAGAGATGTCATTTTAATGATAACCCAGAGATAATATCTTccatattttttaaacacacactttcatttGCTTCCTCAAACATACCTTTTTCGAAGTTTGAGACGGGGCAGAGAGGAAATCTACTTAGACCGAAATAAGAGACACTGTTAGAAAGTATACTGTGCTGCCAAGTTTTTGTAACGGAAAAAGAGTTTTGAAAGCCAATTAAAGGGCCCAAGCAGTGTTTACACTGAGTCTTCATATAAAAAgttgtaatttttgtatttatgtaaaatacacTGCATGACAAcattatagtaatttttttttttccctcttcggGTGGCTTTTTCCAATTATGTTTGCGCTTCGATCAGTATATCAGGAACTACTGAAGTCATTAACATTTTCGATTGAAAGTATTTTCATATCAGATACACAAAGttaaaaaatgaatggatgTAAATGTTTACCTTCCCGTAACTATTGCTGCTAATGCTCCAACACTGTACCTCTCCCATGAGGTTCACAGGAGATCGTAAGAACCAAATACATCCGAATCAAATGTCTACTTTAACCACAAGTTAGTGCAAATGTATGAGTGAATAATCTTACTGCCGTAGCaagctttcttcttctttttttttttttttaaagttcatgcaataataaatgcatatacatttatagaaatgtttttggttgaaaatgaGATGTTAAAAAGCACAGTCATGCAGTAGAGCAGCCGTCACTGTGAAATTAATTTAGATTCTGAATAAAAGCCTTATGCTTTAAGCCTTA

Function

symbol description
ipo11 Predicted to be involved in protein import into nucleus. Predicted to act upstream of or within intracellular protein transport. Predicted to be active in cytosol and nuclear envelope. Orthologous to human IPO11 (importin 11).

NR:

description
importin-11

GO:

id name namespace
GO:0006886 intracellular protein transport biological_process
GO:0005634 nucleus cellular_component

KEGG:

id description
K25201 IPO11, RANBP11; importin-11

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043247120.1 True 3873 mRNA 0.47 30 15026090 15146427

Neighbor

gene id symbol gene type direction distance location
rnf180a rnf180,LOC107667512,LOC107599991,LOC107711845,LOC106584965 coding downstream 27484 14993384 ~ 14998606 (-)
rgs7bpa rgs7bpa,LOC107565984,LOC107686392,LOC107599992,LOC107711899,LOC107667524,LOC107724873 coding downstream 33625 14985714 ~ 14992465 (-)
c8h5orf51 si:dkey-46a10.3,LOC107667559,LOC107686395,LOC107711895,LOC107602868,LOC106580621,LOC106585203 coding downstream 106920 14914656 ~ 14919170 (-)
fbxo4 LOC107667563,LOC107686410,LOC107724879,LOC107599997,LOC107602866,LOC107711844 coding downstream 112075 14909918 ~ 14914015 (-)
ghra LOC107602865,LOC107724907,LOC107711892 coding downstream 122587 14873186 ~ 14903503 (-)
lipg LOC107738997,LOC107565987,LOC107711901,LOC107686385,LOC107599989,LOC107667539 coding upstream 13727 15160154 ~ 15165061 (-)
si:dkey-164f24.2 LOC107667555,LOC107723247,LOC107570302,LOC107711905 coding upstream 33841 15180268 ~ 15188644 (-)
LOC122350063 rfesd,LOC107711828,LOC559859,LOC107580528 coding upstream 44159 15190586 ~ 15192936 (-)
zgc:194839 LOC107659596,LOC107686408,LOC107723116,LOC107723115,LOC107575379,LOC107723246,LOC107723230,LOC107667514,LOC107570299 coding upstream 151198 15297625 ~ 15300723 (-)
ralgps1 ralgps1,LOC107727327,LOC107669254,LOC108412534,LOC107723240 coding upstream 161310 15307737 ~ 15390751 (-)
G64278 NA non-coding downstream 26089 14999731 ~ 15000001 (-)
G64229 sepp1a,LOC107576224 non-coding downstream 156403 14865798 ~ 14869687 (-)
G64238 NA non-coding downstream 185324 14840523 ~ 14840766 (-)
G64236 NA non-coding downstream 187474 14838381 ~ 14838616 (-)
G64227 NA non-coding downstream 246726 14778898 ~ 14779364 (-)
G64337 NA non-coding upstream 22251 15168678 ~ 15170180 (-)
G64338 NA non-coding upstream 25517 15171944 ~ 15172605 (-)
G64336 NA non-coding upstream 29609 15176036 ~ 15178095 (-)
G64348 NA non-coding upstream 74405 15220832 ~ 15222540 (-)
G64351 hmcn2,LOC107570300,LOC107723245,LOC107659581 non-coding upstream 113270 15259697 ~ 15259913 (-)
G64228 NA other downstream 244380 14779531 ~ 14781710 (-)
slc20a1a slc20a1a,LOC107724894,LOC107711884,LOC107686402,LOC107667554,LOC107602858,LOC108440301 other downstream 294699 14723712 ~ 14731391 (-)
LOC122350784 zgc:162939,LOC107602843,LOC107674500,LOC107724903 other downstream 570847 14385600 ~ 14455243 (-)
G63933 LOC107556304,LOC107751435,LOC107594508 other downstream 1162840 13809428 ~ 13863250 (-)
mc3r mc3r,LOC107751459,LOC107669608,LOC107711834,LOC107680356 other downstream 1305576 13716628 ~ 13720514 (-)
G64353 hmcn2,LOC107723245,LOC107659581,LOC107570300 other upstream 137434 15283861 ~ 15284130 (-)
mvb12bb mvb12b,LOC107550570,LOC107753158,LOC107723228 other upstream 502799 15649226 ~ 15700896 (-)
LOC122350093 NA other upstream 1261407 16407834 ~ 16409696 (-)
LOC122350945 drd2b,LOC107745132,LOC107705176,LOC107691748,LOC107664308,LOC107600777,LOC107556418,LOC108428674 other upstream 1900040 17046467 ~ 17096795 (-)
LOC122350953 NA other upstream 2173949 17320376 ~ 17401228 (-)

Expression


Co-expression Network