qars1 (qars,LOC107727984,LOC107738933)


Basic Information

Item Value
gene id qars1
gene name qars,LOC107727984,LOC107738933
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 23994937 ~ 24007734 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043247135.1
GCTCATTCGGGGCTGGCGGAAGCGTAAACCAGCGTGTGTGCGGCACAGAAATGGCGGACGCGGTGTCTATCTTTATGTCAATTGGCCTTAGTGAGCAGAAAGCTAAAGAAACATTGAAAAATGAAGCACTATCATCAACACTCAAAAAGGCTATCGAACAGgCTCAGGGGCTGCTGGGGTCCGCTAGCATTGATAAGACTGCGGGCACTCTGCTGTATAACATGGTGACACGACTCAAAGACTCCAATCGACTGTCTTTTCTCACAGAATACATCATTTCACAGAAAATAATCTCAGAACTACAGCTGTCAGcGGCATTGGACTTTATAAAAAGCCACCCTCAGGAGAATCTGGATCGACCAAAGTTTGAGGCTGCCTGTGGCGTGGGAGTGGTGGTCACACCTGAGCAGATAGAGGATGCGGTTGAAATGATCGTCAGGAAGCACAAAGAGCAGCTGCTGGCAGAGAGATATCGCTTTAACATGGGAATACTCATGGGTGAGGCCAGGACTGCTCTCAAATGGGCTAATGGGAAGATTGTAAAAAATGAAGTGGACATGCAGgTGCTTCACCTTCTGGGTCCAAAAACTGAGGCAGATCTGGAGAAAAAGCCCAAGGCCGCCAAACCCAAAGTTGCAGAGAAAGTTGTAAACACTGAAGAAGTTGCAAATGGTGAAGTAAACACAGAAGGAAAATCATTGATGGAACAGCTGAGAGGAGAGGCACTCAAGTTCCATAAGCCAGGGGAGAATTACAAGACTGAGGGTTATGTTGTAACGCCCAACACCATGAATTTGCTGAAGAAGCACTTGGAAGAAACTGGAGGACAGGTCCGCACCCGTTTTCCCCCTGAGCCTAATGGGATTCTGCATATTGGTCATGCCAAAGcaatcaattttaattttggttatGCCAAGGCCAATAATGGCATCTGTTTCCTGCGGTATGATGACACAAACCctgagaaagaggaagaaaagtACTTTACTGCCATCAAAGATATGGTGGAGTGGCTTGGGTACAAACCTTATGCTGTCACACATGCCTCTGACAACTTCCAGCTTCTCTACGATCTTGCTGTTGATCTCATTCGCAGGGGTGATGCGTACGTGTGCCACCAGCGTGGAGAGGAACTCAAGGGTCACAATGTCCCTCCTTCTCCCTGGAGAGAGCGACCAGTGGAAGAatctttgcttttgtttgacaGGATGAGAAAAGGCATGTTTGCAGAGGGAGAAGTCACTCTCAGAATGAAGATGGTGATGGAAGATGGAAAAATGGACCCTGTGGCATACCGGATCAAATTCACACCACATCACAGGACAGGAGACACTTGGTGCATATATCCAACATATGATTACACACACTGTCTTTGTGACTCTATTGAGAACATCACACACTCACTGTGCACCAAAGAGTTTCAGTCCAGACGATCATCATATTTCTGGTTGTGTAATGCTTTGGATTTGTACTGCCCAGTGCAGTGGGAATATGGACGACTCAATCTTACTTACACTGTTGTTTCCAAGAGGAAGATCATTAAACTGGTGGAAACAGGAATTGTTAGagATTGGGATGATCCACGACTTTTTACTCTCACAGCTCTCAGGAGACGTGGGTTCCCTCCACAAGCTGTGAACAATTTCTGTGCCCGgGTGGGTGTGACTGTTGCCCAGACCACCATGGAGCCACACCTGCTGGAGGCATGTGTTAGAGAGGTGCTCAATGACACAGCTCCTCGTGCCATGGCCATACTTGAGCCTCTCAAAGTCACCATCACCAACCTGCCAACCAATGCACAGAAGGAGGTACGAGTACCAGACTTCCCAGCCAATGAAGCCAAGGGTAGCCATGTGATTCCCTTTTCAAAGACCATCTTTATTGAGCAGAGTGACTTCAGAgagGTGATGGAGAAGGGCTACAAGCGCCTGACTTCAGATCAGCCAGTAGGCTTAAGACATGCAGGATATGTCATCTCTGTACAGCGTGTTATCAAGGATGGCTGTGGTAAAGTGTGTGAGCTAGAGGTGACGTGCACCAGCTCAGACTCTGTAGAAAAGCCCAAAGCATTCATTCACTGGGTGAGCGATCCACTGCGTTGTGAAGTACGCCTGTACGAAAGATTGTTTGTCCATAAAAACCCAGAGGACCCAGCTGAAGTTCCTGCTGGATTCCTGAGTGACATTAATCCTAATTCCTTGACGGTGATTAAAAGTGCCTTGGTAGATCGTTCTGTGGGCAAGGCCAAAGTGTTTGATAAGTTTCAGTTTGAGAGAGTTGGTTATTTCTCACTCGACCCTGATAGCACATCTGAAAAGTTGGTTTTTAACAGAACTGTTACGCTCAAGGAAGACCCAGGAAAGATATGACTGGACTGCAAGAAAGAAGCCTCATAGCCATTATGCATCACAACacagcttttaataaaaatcgAATAAACCAGGGAATTCAACATATTCTATACACACTATGTGAAGCCTTTTTTAACTGTACAAGTTGTGGGCTGTTTTGTATAACCTTTTCCATCTGCTGTGGTTTGGcatctataaaataaacaaactaaagatTT
>XM_043247136.1
GCTCATTCGGGGCTGGCGGAAGCGTAAACCAGCGTGTGTGCGGCACAGAAATGGCGGACGCGGTGTCTATCTTTATGTCAATTGGCCTTAGTGAGCAGAAAGCTAAAGAAACATTGAAAAATGAAGCACTATCATCAACACTCAAAAAGGCTATCGAACAGgCTCAGGGGCTGCTGGGGTCCGCTAGCATTGATAAGACTGCGGGCACTCTGCTGTATAACATGGTGACACGACTCAAAGACTCCAATCGACTGTCTTTTCTCACAGAATACATCATTTCACAGAAAATAATCTCAGAACTACAGCTGTCAGcGGCATTGGACTTTATAAAAAGCCACCCTCAGGAGAATCTGGATCGACCAAAGTTTGAGGCTGCCTGTGGCGTGGGAGTGGTGGTCACACCTGAGCAGATAGAGGATGCGGTTGAAATGATCGTCAGGAAGCACAAAGAGCAGCTGCTGGCAGAGAGATATCGCTTTAACATGGGAATACTCATGGGTGAGGCCAGGACTGCTCTCAAATGGGCTAATGGGAAGATTGTAAAAAATGAAGTGGACATGCAGgTGCTTCACCTTCTGGGTCCAAAAACTGAGGCAGATCTGGAGAAAAAGCCCAAGGCCGCCAAACCCAAAGTTGCAGAGAAAGTTGTAAACACTGAAGAAGTTGCAAATGGTGAAGTAAACACAGAAGGAAAATCATTGATGGAACAGCTGAGAGGAGAGGCACTCAAGTTCCATAAGCCAGGGGAGAATTACAAGACTGAGGGTTATGTTGTAACGCCCAACACCATGAATTTGCTGAAGAAGCACTTGGAAGAAACTGGAGGACAGGTCCGCACCCGTTTTCCCCCTGAGCCTAATGGGATTCTGCATATTGGTCATGCCAAAGcaatcaattttaattttggttatGCCAAGGCCAATAATGGCATCTGTTTCCTGCGGTATGATGACACAAACCctgagaaagaggaagaaaagtACTTTACTGCCATCAAAGATATGGTGGAGTGGCTTGGGTACAAACCTTATGCTGTCACACATGCCTCTGACAACTTCCAGCTTCTCTACGATCTTGCTGTTGATCTCATTCGCAGGGGTGATGCGTACGTGTGCCACCAGCGTGGAGAGGAACTCAAGGGTCACAATGTCCCTCCTTCTCCCTGGAGAGAGCGACCAGTGGAAGAatctttgcttttgtttgacaGGATGAGAAAAGGCATGTTTGCAGAGGGAGAAGTCACTCTCAGAATGAAGATGGTGATGGAAGATGGAAAAATGGACCCTGTGGCATACCGGATCAAATTCACACCACATCACAGGACAGGAGACACTTGGTGCATATATCCAACATATGATTACACACACTGTCTTTGTGACTCTATTGAGAACATCACACACTCACTGTGCACCAAAGAGTTTCAGTCCAGACGATCATCATATTTCTGGTTGTGTAATGCTTTGGATTTGTACTGCCCAGTGCAGTGGGAATATGGACGACTCAATCTTACTTACACTGTTGTTTCCAAGAGGAAGATCATTAAACTGGTGGAAACAGGAATTGTTAGagATTGGGATGATCCACGACTTTTTACTCTCACAGCTCTCAGGAGACGTGGGTTCCCTCCACAAGCTGTGAACAATTTCTGTGCCCGgGTGGGTGTGACTGTTGCCCAGACCACCATGGAGCCACACCTGCTGGAGGCATGTGTTAGAGAGGTGCTCAATGACACAGCTCCTCGTGCCATGGCCATACTTGAGCCTCTCAAAGTCACCATCACCAACCTGCCAACCAATGCACAGGAGGTACGAGTACCAGACTTCCCAGCCAATGAAGCCAAGGGTAGCCATGTGATTCCCTTTTCAAAGACCATCTTTATTGAGCAGAGTGACTTCAGAgagGTGATGGAGAAGGGCTACAAGCGCCTGACTTCAGATCAGCCAGTAGGCTTAAGACATGCAGGATATGTCATCTCTGTACAGCGTGTTATCAAGGATGGCTGTGGTAAAGTGTGTGAGCTAGAGGTGACGTGCACCAGCTCAGACTCTGTAGAAAAGCCCAAAGCATTCATTCACTGGGTGAGCGATCCACTGCGTTGTGAAGTACGCCTGTACGAAAGATTGTTTGTCCATAAAAACCCAGAGGACCCAGCTGAAGTTCCTGCTGGATTCCTGAGTGACATTAATCCTAATTCCTTGACGGTGATTAAAAGTGCCTTGGTAGATCGTTCTGTGGGCAAGGCCAAAGTGTTTGATAAGTTTCAGTTTGAGAGAGTTGGTTATTTCTCACTCGACCCTGATAGCACATCTGAAAAGTTGGTTTTTAACAGAACTGTTACGCTCAAGGAAGACCCAGGAAAGATATGACTGGACTGCAAGAAAGAAGCCTCATAGCCATTATGCATCACAACacagcttttaataaaaatcgAATAAACCAGGGAATTCAACATATTCTATACACACTATGTGAAGCCTTTTTTAACTGTACAAGTTGTGGGCTGTTTTGTATAACCTTTTCCATCTGCTGTGGTTTGGcatctataaaataaacaaactaaagatTT

Function

symbol description
qars Predicted to enable several functions, including glutamine-tRNA ligase activity; protein kinase binding activity; and protein kinase inhibitor activity. Predicted to be involved in several processes, including glutaminyl-tRNA aminoacylation; negative regulation of nitrogen compound metabolic process; and negative regulation of signal transduction. Predicted to act upstream of or within negative regulation of apoptotic process. Part of aminoacyl-tRNA synthetase multienzyme complex. Is expressed in several structures, including alimentary system; brain; genitourinary system; respiratory system; and sensory organ. Orthologous to human QARS1 (glutaminyl-tRNA synthetase 1).

NR:

description
glutamine--tRNA ligase

GO:

id name namespace
GO:0006425 glutaminyl-tRNA aminoacylation biological_process
GO:0005737 cytoplasm cellular_component
GO:0005524 ATP binding molecular_function
GO:0004819 glutamine-tRNA ligase activity molecular_function

KEGG:

id description
K01886 QARS, glnS; glutaminyl-tRNA synthetase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043247135.1 True 2569 mRNA 0.46 23 23994937 24007734
XM_043247136.1 False 2566 mRNA 0.46 23 23994937 24007734

Neighbor

gene id symbol gene type direction distance location
LOC122350362 LOC107687124,LOC107727989,LOC107594958,LOC107727992,LOC107687125 coding upstream 22862 23967525 ~ 23972075 (+)
LOC122350539 sult1st3,LOC107727992,LOC107687125,LOC107687124,LOC107594958,LOC107738928,LOC107727989 coding upstream 31797 23956048 ~ 23963140 (+)
LOC122351094 sult1st3,LOC107727994,LOC107594958,LOC107727992,LOC107687124,LOC107687147,LOC107687125 coding upstream 41347 23942761 ~ 23953590 (+)
LOC122350978 gpr153,LOC107687122,LOC107693426 coding upstream 94862 23871236 ~ 23900075 (+)
LOC122350042 acot7 coding upstream 130022 23828666 ~ 23864915 (+)
mtor mtor,LOC107564227,LOC107727986,LOC107594963 coding downstream 6413 24014147 ~ 24113382 (+)
LOC122350145 NA non-coding upstream 313105 23676434 ~ 23681832 (+)
G66418 LOC107748960,LOC107687117,LOC107691060,LOC107595771,LOC107602461,LOC107755278 non-coding upstream 371466 23620927 ~ 23623471 (+)
G66416 NA non-coding upstream 378255 23615216 ~ 23616682 (+)
G66351 NA non-coding upstream 559904 23434118 ~ 23435033 (+)
G66350 NA non-coding upstream 561192 23432809 ~ 23433745 (+)
acot7 acot7,LOC107754737,LOC107687121,LOC107693425 other upstream 190888 23752568 ~ 23804049 (+)
ndufa7 ndufa7,LOC107748992,LOC107755274 other upstream 360872 23632350 ~ 23634065 (+)
LOC122350936 LOC107710771,LOC106926566,LOC107691064 other upstream 584376 23403713 ~ 23410561 (+)
prdm16 prdm16,si:ch211-263k4.2 other upstream 593375 23054616 ~ 23401562 (+)
mfn2 mfn2,LOC107748965,LOC107602467,LOC107710790,LOC107678429,LOC107698839,LOC107595787 other upstream 1007775 22973995 ~ 22987162 (+)

Expression


Co-expression Network