ggt5a (ggt5a,LOC107703163,LOC107753105,LOC107712462,LOC107550924,LOC107580168)


Basic Information

Item Value
gene id ggt5a
gene name ggt5a,LOC107703163,LOC107753105,LOC107712462,LOC107550924,LOC107580168
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 18233930 ~ 18241230 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043247139.1
CGGAGGGTGAACGTCTCTGTAGGTTCTGTAGCTAGTGAACTTTGCCTAATAGCATTGGAGGGTGCGAAAACACCtcttacaaaaacactttacacAATCCAATTTAGTCTCGACCTCTACACCTTGACAATGCGCTTAATTAGGCGTCGGCACTGAAAGGGGAGGGCAAGCGGCGCACTTCTGCTCTATACTCCACGAGTTGAACGATACGGCGAAGCCTCACCGGGTCGGGAAACAATGGCGAGGCGAAAAGAGAAAGTCTGCTTGTGCTTAAGCATTTTTGTCATATGCATCGTTTTAATCATTATCATTTGCGCGACTCACTTTAACGAGCTGTGCGCCGACGGACTTTACAAAAACGCAGCGGTGGCGGCGGACTCGGAAACCTGCTCAAAGATCGGGCGAGATATACTGCAATTGGGAGGCTCAGCGGTAGATGGAGCCATTGCTACTTTACTGTGCACGTCAATCATAAATCCTCAGAGTATGGGCATTGGTGGAGGATCTATATTCACAATACGGGAAAAAAGTGGTACAGTGAGGGTAATCAATGCCAGAGAGACTGTCCCAAAAGCTTTTAAAACGGACCTTCTTGCCATGTGTCCGACCACAATACAACCAATGGAAGgTGCTCACTGGATTGGTGTACCTGGTGATATCCGTGGCTATGAACTAGCTCATAAACTGTACGGCCGTTTGCCTTGGGCCAGTTTATTTGAGCCCACTATCAAGATGGCTAGAGAGGGCGTCCCTATACACTATGTCCTCTCTCGATTTTTGCCACTTCTCTTAAAGGAGAAGCCAGAATCACCATTACGccagTTATTCCAGAACGAACAAGGCGAGCTACTCAAAAAAGGGGAAATAGTGAGATTCGAAAAACTGGCAGACACGCTTGAGATCGTCGCAGAACAAGGAGCAGACGCTTTGTATATCGGAGACATCGCCAAAGACCTTGTCAGTGATATACAAAGTGCAGGTGGAACAGTTTCTCTGGAGGACTTGAGGTCGTTCAGGGCATCTGAATTAGGTTCCTGGGATGTAGCCGTAGGAGAGTATGTAATGTACTTTCCTCCACCGCCAGCGGGAGGAGCTACACTTAGCCTCATACTCAATACTATGCTAGGTTTCAACCTAAACCCTGCATCTCTGGAGGGAGACGAGAAGGTTTTAACATTTCAGCGTTACGTGGAAACCTGCAAATTCGCCAACGGTCTTAAGAAGTTCATGAAAGATCCCAAATTTGCCTCTCAAACGGAGGCAGTTGAGATCAGTCAGAAGCATTTTGCGGATAAAGTGAGAGCAAAAATCAGCCCTGACCGCACTTATGACGCTAGCTACTACAACGTCACTCCATACCTGGACTCTCATGGCACCACTCACGTGTCCGTGCTCGCTGAGGACGGTATGGCAGTATCCGTGACCAGCACCATCAACCACATATTCGGATCCAGAATTTTCTCCCCCAAGACGGGCATCCTCCTCAACAATGAGCTTGCAGACTTCTGTGGAAAAACAGAGCAGATTCATGCTGGCGAGCAGCCCCCTTCCTCCATGGCTCCAGTGATCCTTTACTCCCCGTCTCAGAAGCACATTGTGGTTATAGGAGCCTCAGGTGGCAGTATGATCACCACCGGGGTGGCTCTGACTCTCATGAACTTCCTGTGGTTCGGCAAGAATCTGCAAGATTCCATCGACGCCCCTGTAGTGTTCGTGGACTCCAAAAACGTCCTCAGCTTTGAGCCCTTGTTTGACAAGGTTGTTCTGGAGTCACTTAACAAGACTGGGCACAAAGTCAAAGTCCCGCAGATGTTTTATAACGTGGTAAATGCCGTGTCAAAGGAAAACAACTGCATAGAGGCAGTATCTGACTCGCGGAAACATGGAAAAGCTGCAGGGTATTGACCCGGAGCGCAGCTGGAGACTGCTTGGTGCGTCTGTGCCATGTTTGGGTGAAGTAAAATGACCAGATGACAAACTGACAAGTAATAACAAACACTGTCAAAATGTGAGattttgatgttttactgtgaaaaaacatgcaaatatatattttctggtttttattgtgaataagGTGTGTTGTAAATACATATGTTGGTATATACACAGTATTTGAATGTTATATTATAGTTTTCAACACGGCTTTAagtttaaagtgcccctgttgCGGGTGATAAAAGTCCCCTACAAAGGCTGACATGCAGGCacctttattgttttataatatgcagttatgtttactttattttctcaACGActctaaaatgatttgtttaacgATTCGTTTTTCCAAACCCGTCCTTTGCCTGACTGCACTGTGCTGATTGGTCCGatctctttttcatttcattatgcCTGTAGTAATGTCTGTAGTGAataagcagtgtttgtgagcgcagtttcattcattcattcaaaccgCCATTTTTACcgctccaaaagcggcacctagtggcaaaaaaggcatttacattttcattaagaccAATGAGAAAGACCTACAAGTGGGCGGGGCTAATGTTTCCATTTGTAGTaaacatgaaatggcttgggattcgtttttaaaaacgactcagTGATTCGGAGTCGACTCTTTTTACGTGGTGCACTTTCAGCACTTTGCAAGACGTTTTCATTCAACtgcataaaaagtaattttcaaaaatctgtaataggggcatttaaaaaaaactgtaaactgcCCAACCTGCTTGtataatgttttgatttatgCACATAGCCGTCAAAGAGTGTTACAgaagaataacattttaaataaaggccattattttgaa

Function

symbol description
ggt5a Predicted to enable glutathione hydrolase activity and peptidyltransferase activity. Predicted to be involved in several processes, including peptide metabolic process; response to estradiol; and response to tumor necrosis factor. Predicted to be active in plasma membrane. Orthologous to human GGT5 (gamma-glutamyltransferase 5).

NR:

description
gamma-glutamyltransferase 5-like

GO:

id name namespace
GO:0006749 glutathione metabolic process biological_process
GO:0003840 obsolete gamma-glutamyltransferase activity molecular_function

KEGG:

id description
K00681 ggt; gamma-glutamyltranspeptidase / glutathione hydrolase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043247139.1 True 2798 mRNA 0.45 12 18233930 18241230

Neighbor

gene id symbol gene type direction distance location
hnf1a hnf1a,LOC107712475,LOC107687971,LOC107550982 coding upstream 127123 18098897 ~ 18106807 (+)
si:ch211-170d8.2 LOC107550939,LOC107753111,LOC107703157,LOC107554433,LOC107687993,LOC107712458 coding upstream 135627 18095035 ~ 18098303 (+)
hps4 LOC107712456,LOC107753110,LOC107687970,LOC107703156,LOC107554431,LOC107550983 coding upstream 139290 18086790 ~ 18094640 (+)
LOC122350291 cox6a1,LOC107687992,LOC107712455,LOC107550940,LOC107753112,LOC107703158,LOC107554435 coding upstream 147287 18084432 ~ 18086643 (+)
prkab1b prkab1b,LOC107687987,LOC107753114,LOC107554438,LOC107703154,LOC108412051 coding upstream 166644 18062682 ~ 18067286 (+)
rnf34a rnf34a,rnf34,LOC107687978,LOC107712480,LOC107703169 coding downstream 85228 18326458 ~ 18333713 (+)
orai1a orai1a,orai1,LOC107550979,LOC107687980,LOC107703171,LOC107753099,LOC106585507 coding downstream 107863 18349093 ~ 18354266 (+)
gck gck,LOC107657322,LOC107550933,LOC107712466,LOC107753094,LOC107703174 coding downstream 166856 18408086 ~ 18417020 (+)
LOC122350731 LOC107703135,LOC107753145,LOC107550932,LOC107712468,LOC107657321 coding downstream 201845 18443075 ~ 18447061 (+)
dusp2 dusp2,LOC107657330,LOC107712482,LOC107550972,LOC107554416,LOC107703175 coding downstream 212346 18453576 ~ 18456539 (+)
G64835 NA non-coding upstream 9229 18224397 ~ 18224701 (+)
LOC122351024 NA non-coding upstream 75340 18153643 ~ 18158590 (+)
G64665 NA non-coding upstream 574612 17359434 ~ 17659318 (+)
LOC122350066 LOC107748143,LOC107687963,LOC107553839,LOC107684508,LOC107753120,LOC107565328 non-coding upstream 860604 17365621 ~ 17373326 (+)
G64654 NA non-coding upstream 924654 17308945 ~ 17309276 (+)
G64841 NA non-coding downstream 46066 18287296 ~ 18287541 (+)
G64855 NA non-coding downstream 106207 18347437 ~ 18348783 (+)
G64858 NA non-coding downstream 125340 18366570 ~ 18367110 (+)
G64862 NA non-coding downstream 149444 18390674 ~ 18391211 (+)
G64878 NA non-coding downstream 209812 18451042 ~ 18451364 (+)
LOC122350298 pla2g1b,LOC107703141,LOC107753147,LOC107554411,LOC107554412,LOC107550943 other upstream 153361 18071485 ~ 18080569 (+)
LOC122350299 LOC107550944,LOC107687988,LOC107753148,LOC107703140 other upstream 163002 18068716 ~ 18070928 (+)
LOC122350300 LOC107687986,LOC107554413,LOC107703155,LOC101885033,LOC108412050 other upstream 171582 18056972 ~ 18062348 (+)
LOC122350649 si:ch73-138n13.1,LOC107687963,LOC107748143,LOC107553839,LOC107565328,LOC107684508,LOC107753120 other upstream 537524 17683305 ~ 17696406 (+)
G64683 LOC107684500,LOC107753151,LOC107553834,LOC107566021,LOC107687959,LOC107742747 other upstream 677582 17555696 ~ 17556348 (+)
lrrc75ba lrrc75ba,LOC107712478,LOC107753104,LOC107703167,LOC107554425,LOC107687975,LOC105891565,LOC108414797 other downstream 16990 18258220 ~ 18284961 (+)
sb:cb288 NA other downstream 177718 18418948 ~ 18423805 (+)
adra2b adra2b,LOC107712484,LOC107657329,LOC107554404,LOC107753091,LOC107550971,LOC107703147 other downstream 218821 18460051 ~ 18464547 (+)
gpat2 gpat2,LOC107712449,LOC107550920,LOC107657318 other downstream 324469 18565699 ~ 18600484 (+)
si:ch211-158d24.2 si:ch211-158d24.2,LOC107550960,LOC107703181,LOC107676623,LOC107728434,LOC107571139,LOC107753137 other downstream 454224 18695454 ~ 18722246 (+)

Expression


Co-expression Network