prr16 (LOC107713553)


Basic Information

Item Value
gene id prr16
gene name LOC107713553
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 998648 ~ 1004413 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043247206.1
aaaagagtaaTTAGGAAGAAGCAATGAATTATGACCGAATCGTTGCTgttgtgtaaataatgtaattcatAAAAAGTGAAGGCAGATGCCGTGTGTCTCGTCTCCGGCAGCATCAGAGTCTGTGTAGGCAGTGCGCATGCGCGTGTGGACGCGTCGCGCAGCTCGAGATTCTTCTGCGTCTGATGAAGAAAACATGCGAGCGTCAACATGCGTGATCTTCACGAGCGGACGCGCCGCACAGCCGTGACGCGCGCCGCTCCGGAGGATGTCCGTTagcgcggcggcggcggcggcggaggaCGGAGGCGTCAATAAAGTGCGGGTCAAACGACAGATCAGGTGCATCGTGGAGGATCTCGAGAACATCCTGGGAGACCTGAAGGATGTGGCGAAGGAACTCAAAGAGgtggtggaggagatcGACtgcctgacctctgacctccgtCTGGAGGAGGACCTGACGGACAGCTCGAAGACGGACACGCTCAACAGCAGCTCCAGcagcaccaccaccaccaccacggCCTCCAGCGTGAAGATCTACCCCGAGGAGACGCTCTTCAGACCCGCGGCCGTCCTCACCGTCCTGAAGAGACCCGGAGCCCCGGAGCCCATGCAGAACGGAGGAGAGGCCCTGTGTCGCCGGGAGAGCCGCTGTCCTCAGACCACCAGAGAACGAGTGCGCTTCAGCGAGAAGGTGCAGTATCACGGCTACTGTCCGGACTGTGACTCCAACAGCTCCGATCTGCACTTACACACCGAGCCGATCGACGGCAAACACAGCCCCGTCCATCAGAGTCCGGCGGAGAACGGCTGCCTCGCTCAGAAACCACACAAGACCATTCTACGCAAGTCCACCAGCACCACTGTCTGACGCAGACCGAGACTCCTTCTCCTTACAGGCTCCTCGGGTTCGGAGAGAAGACAGAAGAGGGGTGTTGAACGGTCATCTTCATCTCATCACGAGCGGTTCTGATGGAAATCAACGAGCCAGAGCATCCGATCACATCACCACCCTTTAAACCAGACAAACCAAAAACTACTAACAGTCCACCGCAACGGAGAAGTTCAGTCCAACGCTGCCAGAGACGTTTATAAAGGACCTTCtatgtttttgtaaagaaaacctTCAAATACAAGAAgcatatttttgatattttctaaGAAGATTTTAAAGATGTCACACAGTATATGATGGAAGATGTATTTATGTactgattaaaaacatgaagTCATCTGCACATGTCTTTATTCTGAAT

Function

NR:

description
PREDICTED: proline-rich protein 16

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043247206.1 True 1259 mRNA 0.54 3 998648 1004413

Neighbor

gene id symbol gene type direction distance location
LOC122350790 lox,LOC107726222,LOC107704580 coding downstream 10088 981634 ~ 988560 (-)
LOC122350969 sncaip,LOC107577394 coding downstream 18615 966169 ~ 980033 (-)
snx2 snx2,LOC107566389,LOC107713555,LOC107704573 coding downstream 37274 947899 ~ 961374 (-)
prdm6 prdm6,LOC107713557,LOC107726219 coding downstream 84273 885192 ~ 914375 (-)
nudt12 nudt12 coding downstream 189497 803023 ~ 809151 (-)
dmxl1 dmxl1,LOC107571775,LOC107663590,LOC107704574 coding upstream 12477 1016890 ~ 1057927 (-)
ap3s1 ap3s1,LOC107661175,LOC107566394,LOC107729057 coding upstream 155987 1160400 ~ 1168457 (-)
LOC122350094 NA coding upstream 240421 1244834 ~ 1248364 (-)
pym1 LOC107701384 coding upstream 245647 1250060 ~ 1252516 (-)
LOC122350264 dgcr6,LOC107572069,LOC107721026,LOC105899531 coding upstream 442587 1447000 ~ 1454530 (-)
LOC122351117 NA non-coding downstream 52309 924448 ~ 946339 (-)
G60112 NA non-coding downstream 121779 875959 ~ 876869 (-)
G60080 znf608,LOC107574328,LOC107697597,LOC107712568,LOC107726216,LOC107704598,LOC107573349 non-coding downstream 146489 845419 ~ 852159 (-)
G60085 NA non-coding downstream 163517 832727 ~ 835131 (-)
G60079 NA non-coding downstream 177880 816461 ~ 820768 (-)
G60118 hsd17b4 non-coding upstream 6954 1011367 ~ 1011818 (-)
G60131 NA non-coding upstream 56680 1061093 ~ 1062238 (-)
G60133 NA non-coding upstream 59984 1064397 ~ 1065200 (-)
G60153 NA non-coding upstream 116515 1120928 ~ 1122233 (-)
G60154 NA non-coding upstream 179895 1184308 ~ 1184649 (-)
csgalnact1b LOC107712620 other downstream 259276 732793 ~ 739372 (-)
LOC122349987 LOC107661519,LOC107712504,LOC107726877,LOC107704593,LOC107573347,LOC794598 other downstream 266804 723145 ~ 731844 (-)
ccl27a NA other downstream 427675 565886 ~ 570973 (-)
G60098 NA other upstream 130988 1135401 ~ 1138152 (-)
commd10 commd10,LOC107728250,LOC107663591 other upstream 136285 1140698 ~ 1159286 (-)
LOC122350266 dgcr6,LOC107572069,LOC107721026,LOC105899531,LOC103029434 other upstream 344758 1349171 ~ 1356953 (-)
LOC122350657 pi4ka,pi4kab,LOC107671001,LOC108440297,LOC107698013,LOC107722847,LOC107559589 other upstream 557133 1561546 ~ 1606609 (-)
G60220 NA other upstream 572392 1576805 ~ 1580616 (-)

Expression


Co-expression Network