mak16 (mak16,LOC107591933,LOC107756848,LOC107566970,LOC107702820,LOC107722986,LOC107691589)


Basic Information

Item Value
gene id mak16
gene name mak16,LOC107591933,LOC107756848,LOC107566970,LOC107702820,LOC107722986,LOC107691589
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 20439262 ~ 20441908 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043247209.1
CTCGCGAGACGCAGTTTGGACGCTCATGTTGTTAATATGGCCGCCGCCTGAAACTTCCATGtggtatttatttgatcacaaaaataGTTGGTAGTAAATCACATTGTATCGGTGTAGCGGCggaattcatatatttattgaGGACCGCCCGAAGAAGCTGCCAGAATGCAACACGACGACGTTATATGGGACCTTATCGGTAATAAGAGATTTTGTTCCTACAAAGTAAAAACGAAAACCCAGCAGTTCTGTCGAAATGAATACAACAGCACAGGCCTTTGCAATCGCAGCTCGTGTCCTCTCGCCAACAGCCAGTACGCTACTGTAAGAGAAGAGAAAGGCCTGTGTTACCTCTACATGAAAGTTATCGAGAGGGCAGCATTCCCGGCTCGCATGTGGGAGAAGGTGAAACTGGATAGAAACTACGCGAAGGCTTTGGAACAGATTGACGAGAACCTGATCTACTGGCCGAGGTTCATCCGACACAAGTGCAAACAGCGCTTGACCAAGATCACTCAGTATCTCATTCGGATCCGAAAACTCACACTCAAGCGACAGAGGAAGTTGGTTCCGCTCAGTAGAAAAGTAGAGACGCgagaaaagaggagagagGAAAAAGCTCTTATTGCTGCTCAGCTGGAAAATGCCATAGAAAAAGAACTCCTAGACCGTCTAAAACAAGGAACGTATGGAGATATATACAACTTCCCCATCCATGCTTTTGATAAAGCTATGGAGAAACAGGAAGAGGAGACCGAatcagaggaagaggaagatgaaggGGAAGAAGAGGAGTCTGGAACGAGAGAATATGTTGCTGATGATGACTTTGAAGAGAGTGATCTCAGTGATTTTGAGGATATGAACAACCTGAAGGACAGCAGTGACGAAgaagaggatgatgaggaggaaTGCAGCGAGGAAGAGGAGTCTGAAGAAGAGTTAGAGGAAGAGAAGACCAAGGCCAAATCGAAAGGAAAGGCTCCGCTCAAAGGCCCAATCAGGAAGAAACGGGCCTATGTAGAGATAGAATATGAGCAAGAGACAGAACCAGCTCAGAAAAGCAAGGCCACATAAAGACTGGACTGCAGAGTAACTCTCTGCGTGGAACATTTTCAATCCATGAAACCTGATCGTTGATATAACACCTCTATTCAGTATCAGTGTAcgccggtgtgtgtgtgtatttgtacgCTCCTCTCCAAATCTCTAATGTGGGATTGTTTGTACATTGAGATCTCATCCGTACTTATGCTGCTGCAAGCgtaagtgttttataaaaaaaaatgttccattgtgtaataaactttatttgaaatggca

Function

symbol description
mak16 Predicted to be involved in maturation of 5.8S rRNA and maturation of LSU-rRNA. Predicted to be located in nucleus. Predicted to be part of preribosome, large subunit precursor. Predicted to be active in nucleolus. Orthologous to human MAK16 (MAK16 homolog).

NR:

description
protein MAK16 homolog

GO:

id name namespace
GO:0007275 multicellular organism development biological_process
GO:0005730 nucleolus cellular_component

KEGG:

id description
K14831 MAK16; protein MAK16

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043247209.1 True 1323 mRNA 0.45 10 20439262 20441908

Neighbor

gene id symbol gene type direction distance location
LOC122350835 LOC107691561,LOC107756843,LOC107566957 coding downstream 79092 20356650 ~ 20360170 (-)
LOC122350834 LOC107756820,LOC107691590,LOC107591940 coding downstream 82735 20352522 ~ 20356527 (-)
lsm1 lsm1,LOC107571959,LOC107548281 coding downstream 169846 20266843 ~ 20269416 (-)
grk5l grk5l,LOC107756834,LOC107691567,LOC107548280,LOC107702864 coding downstream 173339 20222516 ~ 20265923 (-)
star star,LOC107691570,LOC107571960,LOC107548259,LOC107702817 coding downstream 218383 20216745 ~ 20220879 (-)
LOC122351134 NA coding upstream 11123 20453031 ~ 20453131 (-)
ywhabb ywhabb,LOC107702878,LOC107573968,LOC107756849,LOC107691552,LOC103023259 coding upstream 12722 20454630 ~ 20459028 (-)
LOC122350494 eif2s2,if2b,LOC107566961,LOC107756850,LOC107739644,LOC107691551,LOC107573966 coding upstream 18221 20460129 ~ 20464209 (-)
chmp4bb chmp4bb,LOC107756851,LOC107691553,LOC107702881,LOC107566963,LOC107573971 coding upstream 23990 20465898 ~ 20468905 (-)
adgrd2 LOC107721081,LOC107678382,LOC107563844,LOC107570012,LOC107714589 coding upstream 150557 20592465 ~ 20614297 (-)
LOC122350542 rsph14,LOC107756838,LOC107691565,LOC107702819,LOC107723028 non-coding downstream 154422 20281582 ~ 20284840 (-)
G65613 LOC107756819,LOC107723069,LOC107578151,LOC107571958 non-coding downstream 272890 20166056 ~ 20166372 (-)
LOC122350956 NA non-coding downstream 299062 20136603 ~ 20140200 (-)
G65596 adamts13,LOC107725310,LOC107548275,LOC107702807 non-coding downstream 335262 20103337 ~ 20104000 (-)
LOC122349935 NA non-coding downstream 694612 19708097 ~ 19744650 (-)
G65682 NA non-coding upstream 22643 20464551 ~ 20464756 (-)
LOC122349883 NA non-coding upstream 49941 20491849 ~ 20505973 (-)
G65696 nr6a1a,nr6a1,LOC107721088,LOC107698081 non-coding upstream 117723 20559631 ~ 20559971 (-)
G65697 NA non-coding upstream 125250 20567158 ~ 20570293 (-)
G65704 NA non-coding upstream 168654 20610562 ~ 20610923 (-)
LOC122350560 ppia,LOC107566959,LOC107756826,LOC107722982,LOC107591936,LOC107691583 other downstream 17966 20415065 ~ 20421296 (-)
zgc:154046 adamts13,zgc:154046,LOC107702807,LOC107548275,LOC107722731,LOC107702859,LOC108426726,LOC108265337,LOC107740996,LOC107565124,LOC107691587 other downstream 304917 20118007 ~ 20134345 (-)
si:ch211-218o21.4 si:ch211-218o21.4,LOC107550930,LOC107702847,LOC107727198,LOC107747209,LOC107683911 other downstream 1005971 19428738 ~ 19433291 (-)
LOC122351133 NA other downstream 1236885 19202277 ~ 19202377 (-)
LOC122350102 LOC107717958,LOC107676625,LOC107550916,LOC107682323,LOC107659265 other downstream 1391293 19023713 ~ 19047969 (-)
LOC122350336 LOC107714596,LOC107556216,LOC107698089 other upstream 277032 20718940 ~ 20723155 (-)
gna14a gna14a,gna14,LOC107698092,LOC107678467,LOC107556222,LOC107721075,LOC108426707,LOC108265545 other upstream 573085 21014993 ~ 21025831 (-)
G66086 si:dkey-32e23.4,LOC107678420,LOC107562650,LOC107728358,LOC107710834 other upstream 1329560 21771468 ~ 21776620 (-)
G66090 NA other upstream 1342796 21784704 ~ 22254189 (-)
G66119 gfpt1,LOC107710818,LOC107752562,LOC107678434,LOC102792631 other upstream 1572065 22013973 ~ 22025791 (-)

Expression


Co-expression Network