LOC122350623 (LOC107725301,LOC107664996,LOC107674340,LOC107598970,LOC107734523)


Basic Information

Item Value
gene id LOC122350623
gene name LOC107725301,LOC107664996,LOC107674340,LOC107598970,LOC107734523
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 5458354 ~ 5464723 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043247276.1
CAACTTCCCTTTAAATTACCGAATCGACGTTCAGAGAAAAATCGTATAATTCGACACGAACGGCGTCGTTTCGGCACGCCTGCTCTGCGACCGCTAGCGGCGCCAAACGCAACTGCACGCAGGACGCAAGATGGACGCGAACTTCTgactttctgtttctatttcGTTTCGCTTTTGCTCGCGCGAGCTGCTCTCAGATACCGCGGCGTCCCACGGGCAGACGGCGGGGCGCGCTGTCGAATGAATTCGAATCCCGGTCGGAATTCGAATTCCGTTAAAAACAGTCCTCCGAACCGATTCGCTGGCAGCCGTTCGTTCCCACAGCCCCAATCAACCTACGTTGTCTTTTTGTGCATTCGCTTCCTGGTTGCAACACACAGTACAATTCTAGTCCTTCAAAACGCAGTTTAGCTCGAGGGACTGGTCGTCGAGCGTAATATTCGTCCTTAccgctttaaataaacatttcatgtGTGTTTTACGGAAAAGGCGGCATCTTTCTATTCGTTAAAGTGGAATGTCGTGAGCCGTCGAGGGTTAGAAATATCTAATATAGCGAGTGCAAAGCGAAAACCTGGGATCTATGCCTCGTCTTCATGGAGAATGAGACTACTCGATCAACAGAAGGTCTTCTGGAGCCTGTGCATGCAGGCTCAGTAACCTTTAATGAGAGTATTTTAGCCCCACTTCATAAGAACTATTTGTATGAGGAATCAAAAGAATGTTTCACGTACAGCTCTGCCCAGTTGATCAAAAATGGCACTTTACAAAAGCGGTATGCTGCATTTCATTCCGAAAAACGGGAAAAGGGATATTCCGAACAGGAACTTGAAGAGTCGTTTGGCTTCCTGTTGCTTGATGATGCAAACAAGGCAAGGAAAATTGGCGAAACAGGCTTGTTGGTTGGACAGGCAAAGTGCACCACTCTTGGAGACTCCTCAAAAGGTGTCTATATCTCAAAATACTCTGACTGCCTTGACCTGAAGCGCTGGTATGATGGCAAGACAGGCTACATAGTCCTTTTGAAGCTAACCAAGgGAAGAGTGAAAGAGGTTACAGACAACTACACCCAGAATTTCACTCCTCCGACAGCTGGCTACGACTGCCACATATCAGATCAACTTGGTGCTGTGTCTTCAACTACTAGTTCTTTCTTGGCCTATGAGCGAACACAGTACTATATGTACGAACTCTGTGATGGAAGCAATGAAATAGAAACATGCCCAAGACATGCTTGTCCGTTTGCCATTGTGGCATTTTCATATGGGAAGATGAGCACCACGACAGAGTTGGAGCAAAAAAGCCAAGACAAAACAGTGTTTCATTACCAACCGTGGATTGGGCAGTTCAAGATTGAATCTACTGTCTATGATGTTGGTCTTCAGTCTTCAAGCGGAGCGTGGTTCCCAGCCAAActGCCAAAGACAGTTCAAATTGACCATGCAATTTGTGTTTCTGAACTGAAGAGAACCTTGCCACGCGAAATCTTTGAAACTTGCATTGTGGGTGAAGTTTGCATAGATGGCAGATGTTTCAACTTGTATGACGTTGTCTCCTCTAAGGCAAAAAATGACCTGGCTCAGATAGCCCATGagctgaaagaaaaagacatgGCTCTTGTTATCCCTCTGGAAGATTCTGGGTTTCTTATACTGTTACACTCTTCACACCTCTTTTCTTATGAAGatgCAAAGTTGGGTAAGGCAGCAGCACTCCAAGGCATGTTTATTTTCCCAGACTCAAGAACTGTGCCAAGAGatGCCAAGTCTGACCTGCAAAATTGTAAGGTGTCAACAGAAATAATGCAAGTAATCCCAGCGCTCAACTATGCAGAAACAGAGATGGAAAAATGTCCTCCAAACCAGCTGGGGTGCTCTCAAATGTCTTTAGAGAAGCATTTGCAAGACTATGGCACACTTTTTAACCCAGGACTATTGGATGTTCCCACCAGGGAAGCTAGTATGTTTCCAGATCAATATGATGTGCCTGGTGGTTTTACCCTAATATCGCCTAAATGGTCACAGGAGACTGGCACTAGATTAAAATCCTATTTTGATGAGCCATGTGGCTTTACTATTCCAGTAGGAAGGGCATTGGAGTTACTCACTGTTGGTCGACAACAGCGTGGTGATGATCACGACGATGATGTCTATTACTGTATATCATCACCTGAAGATGTACCGCAGACTGATGGCCATATTGAAATGGAGGTGACAAAGCAATCGGAGGCCATCAGTGATGCCTCTGAAAAAGTAGATGAAATCgttaagaaacaaaaagatGAGCAAAAGTATTTGCAGAGCAGTCTCAACCTGCTTTGCCAGAGGAGCTTGGAAAACTGGGAACAGCTGTAG

Function

NR:

description
PREDICTED: protein FAM208B-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043247276.1 True 2354 mRNA 0.45 14 5458354 5464723

Neighbor

gene id symbol gene type direction distance location
tasor2 LOC107664996,LOC107725301,LOC107598970,LOC107566806 coding downstream 174 5446068 ~ 5458180 (-)
plekha2 si:ch211-204d2.4,LOC107599050,LOC107725306,LOC107734508,LOC107566813,LOC107683853 coding downstream 14774 5437353 ~ 5443580 (-)
asb13b asb13b,asb13,LOC107725307,LOC107599049,LOC107664994,LOC107734516,LOC106561665 coding downstream 21524 5431949 ~ 5436830 (-)
nras nras,LOC107598969,LOC107725308 coding downstream 26621 5423591 ~ 5431733 (-)
ampd1 ampd1,LOC107664993 coding downstream 34953 5410951 ~ 5423401 (-)
unc45b unc45b coding upstream 1844 5466567 ~ 5474794 (-)
fnbp1a fnbp1a,fnbp1,LOC107757295 coding upstream 153826 5618549 ~ 5638757 (-)
anapc7 anapc7,LOC107674331,LOC107664992 coding upstream 222547 5687270 ~ 5692999 (-)
rapgef1a rapgef1a,LOC107598978,LOC107725290,LOC107757300,LOC107664972,LOC107674295 coding upstream 229209 5693932 ~ 5717191 (-)
med27 med27,LOC107557205,LOC107665006,LOC107757301,LOC107725311 coding upstream 270798 5735521 ~ 5782271 (-)
G61476 NA non-coding downstream 92006 5323112 ~ 5366348 (-)
G61478 NA non-coding downstream 105897 5336987 ~ 5352457 (-)
G61459 NA non-coding downstream 192316 5143199 ~ 5266038 (-)
G61216 NA non-coding downstream 452788 4961583 ~ 5005566 (-)
G61215 pim1,LOC107584899,LOC107598956,LOC107734527,LOC107674355,LOC107653400,LOC107725309,LOC107391354 non-coding downstream 455471 5001567 ~ 5002883 (-)
G61502 NA non-coding upstream 105681 5570404 ~ 5573893 (-)
G61507 NA non-coding upstream 118192 5582915 ~ 5584720 (-)
G61525 atp2a2,atp2a2a,LOC107674294,LOC107757297,LOC107557188 non-coding upstream 208918 5673641 ~ 5675178 (-)
G61526 atp2a2,LOC105014188,LOC108444117,LOC107397196,LOC107725304,LOC106585469,LOC106514585 non-coding upstream 211267 5675990 ~ 5676748 (-)
G61519 NA non-coding upstream 220437 5685160 ~ 5687209 (-)
nr1h5 nr1h5,LOC107653410,LOC107598964,LOC107725330,LOC107674374,LOC107734534,LOC107570978 other downstream 107075 5341394 ~ 5351279 (-)
LOC122349940 fnbp1,fnbp1a,LOC107720911,LOC107675683,LOC107661630,LOC107757295,LOC107674371 other downstream 250832 5195752 ~ 5207522 (-)
LOC122350811 NA other downstream 270433 5187254 ~ 5187921 (-)
G61071 LOC107601747,LOC107653424,LOC107734537,LOC107674377,LOC107578221 other downstream 1061280 4393213 ~ 4397074 (-)
G61023 NA other downstream 1150855 4300992 ~ 4307499 (-)
pip5k1bb pip5k1bb,LOC107664977,LOC105901155,LOC107566804,LOC108412809,LOC108265367,LOC108234418 other upstream 11490 5476213 ~ 5510943 (-)
c8h9orf116 LOC107757294 other upstream 140449 5605172 ~ 5609572 (-)
G61513 NA other upstream 149606 5614329 ~ 5617664 (-)
LOC122350596 LOC107557202,LOC107757303,LOC107725315,LOC107674335 other upstream 455238 5919961 ~ 5961106 (-)
LOC122350671 fibcd1,LOC107739453,LOC108428067,LOC102776889,LOC107596897,LOC107700935,LOC105015243,LOC106936583 other upstream 959019 6423742 ~ 6442982 (-)

Expression


Co-expression Network