si:ch211-51h9.7


Basic Information

Item Value
gene id si:ch211-51h9.7
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 2069818 ~ 2071669 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043247302.1
caaaaaccCAGGAAAATTACATACTCTGACTAAAATCTACATGAAcgcatgaaatatttttgtaagcTGTAATAGTATATTAGATAACATGCCTGCGTAAAAAGAAAAGACCCAAAAATCTCACATGTGACCTTGAACCCGGAAGCAGTCATAAGCAGCAGGTATATTTGTACCAATAAACAACGACGCGCTGTAGTGTTCATCATTAGGATGTTTAGAGAAGATAGGTTCATAAAGGTATTGTATAAATGTCCTACCGTAAAtgtatcaaaacttaatttttgtttagtaatatgAATTGctaaaaactcatttaaaggcaattttcttaatatatCCTCAGATTCCGTATTTCATAATCGTTGCATCTCGGTCAAATATTATCATATCTTGTCAAGCcatgcatcaatggaaagcttatttattgatttagaaATCTGACCGGTTTTGTGGTCCGGGATCGCTCGTGCATTAAACAAACACTTCCCGCCTTTAGGGGGCGCTGTCGCACGCGCGGCGCACAGAGTTTGTGTTGCGTTTCAGCTGTAGGCGCTTAGAAACATAGTTTGCTTTTCGCGTCGAACTCGACTTTAAGCGGCGGTTTCGAGCCAGAAACGCTCGTTCGTTTCCCGCGGCTTCAGCTGTCGTCGGCGGGAAGGCTCGTTCTCCCTCGGGATGCTTCCGGGGAAGTTTCCCGCTGCGCTTTACGTCGCGGCGCTGTGCTGCGACTGGGTCCGGCTCGCCCTGGGCTGTCCCGGGCTGCTGCTGTGCCGCTCCTGCGGGCACGAGGTGGCGGAGGACGCGGACCTGAGGTTCGTTCCCAGCCGCCTCGCGCTGTCGCACCGGAACCACACGGCGGTCGGAGGGAAGCGCGTCTCCGTCCAGCTCTTCGAGAACCCGCGGGGCTTCCGCTTCGAAGTCGTGACTTTCGCGCGCGCGGACGTGCTGAAGCACTGGCCGGCGGACCCTCACTTCACCTGGTATCCGGGTCACGCGTGGACCGTCGCCACCTGCCCGCGGTGCAAAACACACCTAGGTTGGGCGTTTCAGCCCAGCGCCTGGCCCAGGACGGTGACCCGGGAAGAGTTCGAAGGGTCGGACCGGACCTTCGTGGCGCTCGTGATCGACAGACTCCTTCAGGAACGCTTCGCCTCGGCGCTGCTGATGACGCCCAAGTCGTTCAGAAGCTGACGATCAGCCCGAAACCGTACTTCACGCCCTTCAATAAAGCTATTTTTCACGGGGGAACGTTTAACCGCGACGGCCCTGGCTTTGTTTCTCGACCCCGAGGGTAAAATACGGCTTCCCACCAACCAAAAAAACTCATCGTAACCTTTATTGCGTTTAACCGGACGAACGCCAGCGTTGGCGAAGCACGAGCCGactcctttttttaatattttattttatcaaaaatgtaatccATTTCAAATCTGGTGGATGTCTGTAAAACAAGACAAGATAAAAATCAAAGACTTAA

Function

NR:

description
PREDICTED: protein SET

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043247302.1 True 1480 mRNA 0.51 2 2069818 2071669

Neighbor

gene id symbol gene type direction distance location
gle1 gle1,LOC107671035,LOC107699671,LOC107754403 coding upstream 530 2061541 ~ 2069288 (+)
mrpl40 LOC107753002,LOC107559600,LOC107699643,LOC107560058,LOC107754402,LOC107671004 coding upstream 11093 2055331 ~ 2058725 (+)
enkd1 si:ch211-220d9.3,enkd1,LOC107754420,LOC107699630,LOC107657207,LOC107670972 coding upstream 55134 2006084 ~ 2014684 (+)
ikbkb ikbkb,LOC107671012,LOC107722850,LOC107754415 coding upstream 73959 1966583 ~ 1995859 (+)
LOC122350512 NA coding upstream 122869 1936761 ~ 1946949 (+)
naif1 naif1,LOC107559603,LOC107753004 coding downstream 24490 2096159 ~ 2103906 (+)
fam102aa fam102aa,LOC107671017,LOC107699668,LOC107752986,LOC107754406,LOC105891604,LOC108430372 coding downstream 34721 2106390 ~ 2133931 (+)
sh3glb2a sh3glb2a,LOC107671032,LOC107754407 coding downstream 67561 2139230 ~ 2152391 (+)
crb2b LOC107754408,LOC107699666,LOC107560064,LOC107568009 coding downstream 98842 2170511 ~ 2203097 (+)
lhx2b lhx2b,lhx2 coding downstream 251930 2323599 ~ 2331771 (+)
LOC122350140 NA non-coding upstream 42490 2024562 ~ 2027328 (+)
G60288 NA non-coding upstream 66815 2000761 ~ 2003003 (+)
G60281 vdac3,LOC107671013,LOC107559564 non-coding upstream 70350 1967120 ~ 1999468 (+)
G60269 NA non-coding upstream 116692 1952793 ~ 1953126 (+)
G60265 NA non-coding upstream 119522 1947148 ~ 1950296 (+)
G60296 NA non-coding downstream 81802 2153471 ~ 2156394 (+)
G60297 LOC107568007,LOC107754426,LOC107670998,LOC107699638,LOC107560048 non-coding downstream 87645 2159314 ~ 2162044 (+)
G60323 NA non-coding downstream 91638 2163307 ~ 2165242 (+)
G60328 NA non-coding downstream 121288 2192957 ~ 2204310 (+)
G60335 NA non-coding downstream 272267 2343936 ~ 2344169 (+)
LOC122350758 dynll1,dynll2a,LOC103397138,LOC100698873,LOC107559583 other upstream 29982 2037699 ~ 2039836 (+)
LOC122350053 NA other upstream 33838 2030824 ~ 2035980 (+)
polb polb,LOC107670984,LOC107722860 other upstream 49784 2014859 ~ 2020034 (+)
G60259 LOC107560031,LOC107559593,LOC108412499,LOC107754396 other upstream 151447 1915460 ~ 1918371 (+)
pggt1b pggt1b other upstream 851014 1210815 ~ 1218804 (+)
G60788 lhfpl4b,LOC107584928,LOC107674308,LOC107743140,LOC107727430,LOC107701811,LOC103032126,LOC105898894 other downstream 1776945 3848614 ~ 3850557 (+)
LOC122350109 LOC107743114,LOC107552217,LOC107674346 other downstream 1853192 3924861 ~ 3931488 (+)
ccdc120a LOC107701815,LOC107674368,LOC107584880,LOC107727423,LOC107552222 other downstream 1957634 4029303 ~ 4073897 (+)
LOC122350082 si:ch211-240g9.1,LOC107598959,LOC107653411,LOC108438565,LOC108264952,LOC105013926,LOC100700110,LOC105889737 other downstream 3032901 5104570 ~ 5264366 (+)
LOC122350084 atp2a2,LOC107757297,LOC107674294,LOC107566800,LOC107599024,LOC108444117 other downstream 3155283 5226952 ~ 5229608 (+)

Expression


Co-expression Network