lipg (LOC107738997,LOC107565987,LOC107711901,LOC107686385,LOC107599989,LOC107667539)


Basic Information

Item Value
gene id lipg
gene name LOC107738997,LOC107565987,LOC107711901,LOC107686385,LOC107599989,LOC107667539
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 15160154 ~ 15165061 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043247326.1
ctatttaaaactcTAATGAGCAACCTGATACAGGTTCATACACTTGCCTGGTACCTTTTAGCGAAGGAGTAACACGTACAACCTCACCAGTTACTCCAGTTTGTCAGAAGAACGAGGAAACCATTTTAAAGCCCTGAACATTATGGTAGAGAAATCGATAAGACTTGCACTTTGCTTGTTATGTTTTATCCTGTGCCATTCATTCAGTGCTTTGGCCGCTGCACCCGACGAGAACGCGCAACTGAAAGATGATGCCGAGGACAACTTCTCAATGGATCCAGAGCTGCTTCATGACCGAATCAAGTACAACGTGCGAAAGTCTTTCGATCTTGATGACGACGGCTGTTACCTCCAACCTGGGAAAAAGGAAAGCATTGAGGAGTGTGGCTTTAACGCCACAGTCAAGACCATTCTGATCATCCACGGCTGGACGATGAGTGGGATGTTTGAGAGCTGGATGCACAAGCTGGTGGCTGCTGTTCAGAGGCGGGAGTCGGAGGCTAACGTGGTAGTGGTCGACTGGCTGGGCCTGGCCCACCAGCTTTACCCTGATGCCGTTAACCATACCCGCCGGGTCGGGCAGAGCATTGCAACCCTTTTGGACTGGCTCCAGGAAGAAGTGCAGCTACAACTTGAGGACGTGCATATGATTGGATACAGTCTTGGTGCTCATGTTGCTGGATATGCTGGAACTTTTGTAAAAGGAATTGGACGTATAACAGgtttaGACCCAGCTGGCCCCATGTTTGAGGGGGCAGAGTCCCACAAGAGGCTTTCTCCTGATGACGCAGACTTCGTCGACGtcctgcacacatacacacgggGAGCTTTGGGCGTCAGTATTGGGATCCAGGAACCTATTGGACACATCGATATTTATCCCAATGGGGGAGATGTACAGCCAGGCTGTTCCTTAGGAGATGTGCTGTCCACCGCTGCTGCAGGAAACTTTGTGGAAGTCATGAAGTGTGAACATGAGCGGGCAGTGCATCTCTTCGTGGACTCCCTCATGAGCAAAGACCACGTGAGCTACGCTTTTCAATGTACCGGCCCTGATCGCTTCAAGAAGGGCATCTGCTTGAGCTGCAGGAAGAACCGCTGCAACAGCATCGGTTACAATGCCAAGAAAATGCGTAAGAGGAGAAACAGCAAAATGTACCTGAAGACTCGCGCAGACACACCTTTTGGTGGTTACCACTATCAGATGAAGATGCATGTGTTCGACAGAAAGAACGCCGATGATGCAGATCCTACTTTCTACGTCAAACTACACGGATCCCATAATGATACCACTGACCTCAGTGTAGACATTGCCGACGGAGTTGGTCTGAATCTCACGAACACATTTCTCGTCTTCACTGAAGAGGACATCGGTGATCTGCTGAAGATTTCTCTTCGCTGGGAAGGCCCTTCTGATTCCTGGACGTCTGTGTTAAAACACCTTAAGTCGTCGTTCTGGTCATGGTCGggttcacaaaacaaaaaagttctGGAGGTTCGAAGGATCAGAGTCAAAGCAGGAGAAACGCAGAAAAAGTTCACCTTCTGTGCTGAAGCGACAGAGATATCGCCTGGGCAAGAAGTTACATTTCTTAAATGTCGTGATGGCTGGGAAGTGAAACCTAGAAAACGATTGCACTACTGAGAGGAAGCGCTGTTACCTAGGGACCCAAGGCGATGAGGGGCCTGagcacttttgtttgttttggtacaCATTTGGTGGGATAAAGCACCATATTTCTTTGGGTGGGTAGAACACAGCTTGTGCTGCTTAAATGGCCAGCTCGAATGGGTGATGACTGGTTACTGGACTTGCTcagggcatttttttttttctaccgtTGGGAAGTTCTGAATTGTGAGATTCTTTTGATACTATTGTATGTTTTCTACTGTTGTGTTCAGAATGTCCGTTTTGTGGATCTCCGACTGTTCCTTAACAACGCAGTacatgttgttatatttttgtacgtttttaatttatgaaggagaaaaaaaagcactgtaaaACCAAGCTTATTTATCAACCTAATGCACACCTTGTACCAAGGCATAAATGAATTCTCTCCCAAGTTTCCTGGTGACCACTTTTACGTCTGTAGGTGTCTGTGGATTTCAACAGGAAGGATTTTATGTGAGTTCACAGTATTATTTAAGGTCAGAAGAATGGAGAGAACCGCTCTTTGTCTTCATAAATATGTTGCACATTTTGTGCCTTGTTCTGTACATGgtttatgtatataatgtgaataaaacgtaataatttgtaataaaattactttGGATTCAAA

Function

NR:

description
PREDICTED: endothelial lipase

GO:

id name namespace
GO:0006629 lipid metabolic process biological_process
GO:0005576 extracellular region cellular_component
GO:0004465 lipoprotein lipase activity molecular_function

KEGG:

id description
K22284 LIPG; endothelial lipase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043247326.1 True 2291 mRNA 0.46 10 15160154 15165061

Neighbor

gene id symbol gene type direction distance location
ipo11 ipo11 coding downstream 13727 15026090 ~ 15146427 (-)
rnf180a rnf180,LOC107667512,LOC107599991,LOC107711845,LOC106584965 coding downstream 161548 14993384 ~ 14998606 (-)
rgs7bpa rgs7bpa,LOC107565984,LOC107686392,LOC107599992,LOC107711899,LOC107667524,LOC107724873 coding downstream 167689 14985714 ~ 14992465 (-)
c8h5orf51 si:dkey-46a10.3,LOC107667559,LOC107686395,LOC107711895,LOC107602868,LOC106580621,LOC106585203 coding downstream 240984 14914656 ~ 14919170 (-)
fbxo4 LOC107667563,LOC107686410,LOC107724879,LOC107599997,LOC107602866,LOC107711844 coding downstream 246139 14909918 ~ 14914015 (-)
si:dkey-164f24.2 LOC107667555,LOC107723247,LOC107570302,LOC107711905 coding upstream 15207 15180268 ~ 15188644 (-)
LOC122350063 rfesd,LOC107711828,LOC559859,LOC107580528 coding upstream 25525 15190586 ~ 15192936 (-)
zgc:194839 LOC107659596,LOC107686408,LOC107723116,LOC107723115,LOC107575379,LOC107723246,LOC107723230,LOC107667514,LOC107570299 coding upstream 132564 15297625 ~ 15300723 (-)
ralgps1 ralgps1,LOC107727327,LOC107669254,LOC108412534,LOC107723240 coding upstream 142676 15307737 ~ 15390751 (-)
LOC122350755 zbtb34,LOC107723248,LOC107550586,LOC107727329,LOC107564041,LOC107727326 coding upstream 228288 15393349 ~ 15407170 (-)
G64278 NA non-coding downstream 160153 14999731 ~ 15000001 (-)
G64229 sepp1a,LOC107576224 non-coding downstream 290467 14865798 ~ 14869687 (-)
G64238 NA non-coding downstream 319388 14840523 ~ 14840766 (-)
G64236 NA non-coding downstream 321538 14838381 ~ 14838616 (-)
G64227 NA non-coding downstream 380790 14778898 ~ 14779364 (-)
G64337 NA non-coding upstream 3617 15168678 ~ 15170180 (-)
G64338 NA non-coding upstream 6883 15171944 ~ 15172605 (-)
G64336 NA non-coding upstream 10975 15176036 ~ 15178095 (-)
G64348 NA non-coding upstream 55771 15220832 ~ 15222540 (-)
G64351 hmcn2,LOC107570300,LOC107723245,LOC107659581 non-coding upstream 94636 15259697 ~ 15259913 (-)
G64228 NA other downstream 378444 14779531 ~ 14781710 (-)
slc20a1a slc20a1a,LOC107724894,LOC107711884,LOC107686402,LOC107667554,LOC107602858,LOC108440301 other downstream 428763 14723712 ~ 14731391 (-)
LOC122350784 zgc:162939,LOC107602843,LOC107674500,LOC107724903 other downstream 704911 14385600 ~ 14455243 (-)
G63933 LOC107556304,LOC107751435,LOC107594508 other downstream 1296904 13809428 ~ 13863250 (-)
mc3r mc3r,LOC107751459,LOC107669608,LOC107711834,LOC107680356 other downstream 1439640 13716628 ~ 13720514 (-)
G64353 hmcn2,LOC107723245,LOC107659581,LOC107570300 other upstream 118800 15283861 ~ 15284130 (-)
mvb12bb mvb12b,LOC107550570,LOC107753158,LOC107723228 other upstream 484165 15649226 ~ 15700896 (-)
LOC122350093 NA other upstream 1242773 16407834 ~ 16409696 (-)
LOC122350945 drd2b,LOC107745132,LOC107705176,LOC107691748,LOC107664308,LOC107600777,LOC107556418,LOC108428674 other upstream 1881406 17046467 ~ 17096795 (-)
LOC122350953 NA other upstream 2155315 17320376 ~ 17401228 (-)

Expression


Co-expression Network