tmed7 (LOC107729055,LOC107728255,LOC107661170,LOC108265697,LOC107663596,LOC107572957,LOC107573769)


Basic Information

Item Value
gene id tmed7
gene name LOC107729055,LOC107728255,LOC107661170,LOC108265697,LOC107663596,LOC107572957,LOC107573769
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 1185769 ~ 1187485 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043247331.1
atgaatgtcatttttatcagtttCATAATAGACATTTCCTTTACCTGGTCTTATAatgttctgtgtgtctgtggtcAGGTGGTCACCGGCGGTCACTATGACGTGGACTGTCGTCTGGAGGACCCGGACGGGACGGTTCTTTATAAAGAGATGAAGAAGCAGTACGACAGCTTCACCTTCACCGCCTCCAGGAACGGCACGTACAAGTTCTGCTTCAGCAACGAGTTCTCCACCTTCACGCACAAGACCGTCTACTTCGACTTCCAGGTCGGAGACGACCCTCCGCTGTTCCCCAACGAGAACCGAGTGACGGCTTTAACACAGATGGAGTCGGCCTGCGTCTCTATTCACGAGGCGCTGAAGTCCGTGATCGACTACCAGACACACTTCCGCCTGCGAGAGGCTCAGGGCCGCAGCCGAGCCGAGGATCTGAACACCAGAGTGGCCTTCTGGTCCATCGGGGAGGCCTTCATCCTGCTGGTGGTCAGCATCAGTCAGGTGGTGCTCCTCAGGAGCTTCTTCTCAGACAAGAAAACCACTACGACCCGCGTGGGATCATAACTCCTCTGACACTGTCCAAGggtttttatatgaatatgagttatttaaagaaaagcCTTGAGCTCGTTTTCTCTAGTCCTGTGTGCGATCCTCAGCTCATATCCAGCAGAGTATTTCAGCGCTGAAAATtaaactgctttatttattttgtggctGTGTTGACTCTCTACATGTATGTGAATGTTAAAGGATGTACAGACACTGTAGACCTGCTTGACACACCGGTGCAGTTTATacccatcatcatcatcatcatcatcatcactcaAGATGTAGTTCAGTCGTCATGTTTGAATGCGAGAGAGCTTTATTTGCTTTATGTTGTACAAAACAAGCATCCTTGCTCGTGTTTCCTAGTCgtaattttcttttcatgacattggtgtaattgtttttttttattaggtgtttatttttattagcggTGCATTGATTCTTGTTTGAATTGGTTAATAAATGTCTGGAGGAACGTC

Function

NR:

description
PREDICTED: transmembrane emp24 domain-containing protein 7-like

GO:

id name namespace
GO:0006810 transport biological_process
GO:0016021 integral component of membrane cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043247331.1 True 1034 mRNA 0.46 3 1185769 1187485

Neighbor

gene id symbol gene type direction distance location
cdo1 cdo1,LOC107729053,LOC107573765,LOC103396961 coding upstream 7098 1170649 ~ 1178671 (+)
sema6a LOC107661172,LOC107663594 coding upstream 56267 1069841 ~ 1129502 (+)
hsd17b4 hsd17b4 coding upstream 169204 1005559 ~ 1016565 (+)
LOC122351116 ppic,LOC107704600,LOC107713556,LOC107726227,LOC107566397,LOC100333141,LOC107703627 coding upstream 262561 918543 ~ 923208 (+)
LOC122351049 cep120,zgc:163014,LOC107726217,LOC107712640,LOC107694735 coding upstream 308822 853071 ~ 876947 (+)
LOC122350615 fem1c,LOC107728259,LOC107572967,LOC106580179 coding downstream 863 1188348 ~ 1199937 (+)
LOC122350068 ccdc112,LOC107573794,LOC107578772 coding downstream 16756 1204241 ~ 1209643 (+)
trim36 trim36 coding downstream 32239 1219724 ~ 1235577 (+)
LOC122350095 NA coding downstream 49447 1236932 ~ 1243158 (+)
spats2 LOC107749411,LOC107701385,LOC107573793,LOC107661167,LOC107572966,LOC107728257 coding downstream 66146 1253631 ~ 1266234 (+)
G59877 NA non-coding upstream 20993 1162420 ~ 1164776 (+)
G59876 NA non-coding upstream 24609 1156922 ~ 1161160 (+)
G59845 LOC107698412,LOC107571775,LOC107726226,LOC100537613 non-coding upstream 162855 1021192 ~ 1022914 (+)
G59814 NA non-coding upstream 209063 973486 ~ 976706 (+)
G59824 NA non-coding upstream 225598 958679 ~ 960171 (+)
G59898 NA non-coding downstream 80699 1268184 ~ 1268392 (+)
G59899 NA non-coding downstream 80953 1268438 ~ 1268674 (+)
G59914 NA non-coding downstream 204658 1392143 ~ 1393428 (+)
G59903 NA non-coding downstream 208562 1396047 ~ 1491642 (+)
G59902 dtx1,LOC107692206,LOC107572068,LOC107671029,LOC101885597 non-coding downstream 214274 1401759 ~ 1494731 (+)
znf608 znf608,LOC107574328,LOC107697597,LOC107712568,LOC107704598,LOC107573349,LOC107726216 other upstream 333765 842077 ~ 852004 (+)
G59807 NA other upstream 380930 803653 ~ 804839 (+)
cdc14b cdc14b,LOC107661524,LOC107704583,LOC107568104,LOC107726879,LOC107570987 other upstream 635082 537775 ~ 550687 (+)
pggt1b pggt1b other downstream 23330 1210815 ~ 1218804 (+)
G60259 LOC107560031,LOC107559593,LOC108412499,LOC107754396 other downstream 727975 1915460 ~ 1918371 (+)
polb polb,LOC107670984,LOC107722860 other downstream 827374 2014859 ~ 2020034 (+)
LOC122350053 NA other downstream 843339 2030824 ~ 2035980 (+)
LOC122350758 dynll1,dynll2a,LOC103397138,LOC100698873,LOC107559583 other downstream 850214 2037699 ~ 2039836 (+)

Expression


Co-expression Network