igf3 (LOC107755307,LOC107598996,LOC107665064)


Basic Information

Item Value
gene id igf3
gene name LOC107755307,LOC107598996,LOC107665064
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 6766966 ~ 6770484 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043247350.1
ATGCCTACCTGTCATGCCAGACGCCTTCAGATGCTTCGAGGATTCCTGAAGAAAGGAGTTATTCTGTCTGATAAGCTGCAGGTGGCTGAAAGTTTGTTTCTGGTGAAGCAGGTTCCCAGCTGGCGaagtgtgtgtgtcctctgtTCCCTGTACTGTGTCCTGATCCTGCCAGACGCTGGTGAGGCTGCCAAAGCACGCTGCGGACGAGAGCTAGTCGCTGACCTGGAGTTTGTGTGTGGAGACCGTGGCTTTTACAGAGGCAAACCTGGAGCAGCCCGTAGCGGCGGCCCCCGCTCTCGTGGGAAAGGGATCGTAGAGCAGTGTTGTGTCCGTGGATGTGACCTCCAGCATTTGGAGTCGTACTGTGCCAAACCCAAGAGGGTACGCCGTGAAGTCCCTGCATCTCTGCAGCAGACTCTGGAAGATCAGTTTTGGCTGGTGTTTCAGCAGCGATACCAGAAGCGTGCAGAGATGAACAGAGATGAGGAAGCCGCTTCGCAAAGACTCAGAGAGCGAATGCTTTACCGCTGGAACTCCAGAGATTCAGTTTTAGTAACCGACCGACCCTCCTCAACACTACAGCAACCTTCGGCTGAGAGAACTGCATCACGACCAACATTTCTCCCCCACATCAGATAGTCCTGGCTCTTTTTGGATCTTTGTGGACTTTATGAATCACCTTccttcacttaaaaaaaaaagactttgtcGTCCTGGCAGATGTATAAACTGAGCAGTATGTAAAAGAAACTAGAGGACAAGATGTTAAAGCCTCTCGTGCCATAAAAAATGAAGAGCTGTCACAGGCTGTACTGGTTTCGTTAAGCATATGCTGAATGCAAGAtgaattgtgtttttccattcagttttgttttcagcttctctctgtctctgggtaAATGagttcaaagcaaaatgaagtTGAATGTGTTTGTATGATAGCTGAGGTAAGtcattttgaatgtaaatgtgacGTTTCTTAATGTTAGCGGATATATTTTCTTATGTGTAATTTATATTCTATAAGATTAGAGTTTTCTGGtacttgtaaaatatgtatctaAAGGAGATTTgtaaagaattttaaataaaagaaa

Function

NR:

description
unnamed protein product

GO:

id name namespace
GO:0001556 oocyte maturation biological_process
GO:0005576 extracellular region cellular_component
GO:0005159 insulin-like growth factor receptor binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043247350.1 True 1097 mRNA 0.45 4 6766966 6770484

Neighbor

gene id symbol gene type direction distance location
serping1 LOC107665067 coding downstream 2361 6758204 ~ 6764605 (-)
cabp4 LOC107598993,LOC107665077,LOC107755310,LOC107603028,LOC107699144 coding downstream 57001 6704048 ~ 6709965 (-)
LOC122351102 LOC107755287,LOC107758020,LOC107665055,LOC107549659 coding downstream 76305 6679661 ~ 6690661 (-)
b3gnt3.4 b3gnt3,LOC107665060,LOC107599054,LOC107755313 coding downstream 88813 6670280 ~ 6678153 (-)
ccdc124 ccdc124,LOC107557177 coding downstream 123643 6636743 ~ 6643323 (-)
si:dkeyp-110g5.4 LOC107665063,LOC107755306,LOC107599055 coding upstream 688 6771172 ~ 6774736 (-)
atp2b3a atp2b3a,LOC107755305,LOC107758015,LOC107699155,LOC107603076,LOC107665062 coding upstream 4390 6774874 ~ 6801595 (-)
dedd dedd,LOC107755304,LOC107665071,LOC107603111,LOC107699191,LOC108411641 coding upstream 37357 6807841 ~ 6814340 (-)
bgna LOC107665058,LOC107755294,LOC107700508,LOC107550196,LOC107757994 coding upstream 46427 6816911 ~ 6824013 (-)
si:dkey-6n6.1 si:dkey-6n6.1,LOC107599056,LOC107755293,LOC107665074,LOC107699266,LOC107757992,LOC107550204 coding upstream 54854 6825338 ~ 6834435 (-)
G61663 NA non-coding downstream 108682 6657498 ~ 6658284 (-)
G61640 NA non-coding downstream 205048 6561450 ~ 6561918 (-)
G61629 NA non-coding downstream 215255 6551404 ~ 6551711 (-)
G61582 NA non-coding downstream 298550 6467953 ~ 6468416 (-)
LOC122350799 LOC107725298,LOC107598986 non-coding downstream 491756 6273884 ~ 6275210 (-)
G61782 NA non-coding upstream 91544 6862028 ~ 6862954 (-)
G61860 cacna1e,LOC107707593,LOC107657843,LOC107599003 non-coding upstream 504106 7274590 ~ 7281165 (-)
G61865 NA non-coding upstream 535628 7306112 ~ 7308340 (-)
LOC122350886 NA non-coding upstream 607271 7377755 ~ 7378459 (-)
LOC122350888 NA non-coding upstream 619804 7390288 ~ 7394209 (-)
LOC122350671 fibcd1,LOC107739453,LOC108428067,LOC102776889,LOC107596897,LOC107700935,LOC105015243,LOC106936583 other downstream 323984 6423742 ~ 6442982 (-)
LOC122350596 LOC107557202,LOC107757303,LOC107725315,LOC107674335 other downstream 805860 5919961 ~ 5961106 (-)
G61513 NA other downstream 1149302 5614329 ~ 5617664 (-)
c8h9orf116 LOC107757294 other downstream 1157394 5605172 ~ 5609572 (-)
pip5k1bb pip5k1bb,LOC107664977,LOC105901155,LOC107566804,LOC108412809,LOC108265367,LOC108234418 other downstream 1256023 5476213 ~ 5510943 (-)
LOC122350104 LOC107755295,LOC107665061,LOC107598999 other upstream 43987 6814471 ~ 6816747 (-)
xpr1a xpr1a,LOC107758009,LOC107755298,LOC107699288,LOC107665065,LOC107603171,LOC107599040 other upstream 104865 6875349 ~ 7056429 (-)
lhx4 lhx4,LOC107699337,LOC107550233,LOC107758007,LOC107599001,LOC107755297,LOC107665078 other upstream 320966 7091450 ~ 7102993 (-)
spata6 LOC107657881,LOC107699473,LOC107549716,LOC107757996,LOC107599047 other upstream 907012 7677496 ~ 7687562 (-)
LOC122350139 elavl4 other upstream 1346524 8117008 ~ 8232774 (-)

Expression


Co-expression Network