LOC122350675 (cox5b1,LOC107698109,LOC107556219,LOC107747804,LOC108426657,LOC107602047,LOC107718706)


Basic Information

Item Value
gene id LOC122350675
gene name cox5b1,LOC107698109,LOC107556219,LOC107747804,LOC108426657,LOC107602047,LOC107718706
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 20917028 ~ 20919100 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043247354.1
CACTTAAAGCGCGCGGCAGCTGCAGCGCATGCGCAGTTCTTCTGGAAAAATGGCGGCCAGGCTCCTCTTGAGATCGGCGACCCGTGCTTCTGCTGCTGTTTACAGCCGTCAGCCTCTGCCAGCTCAAGCTGTAGTGAGGAGACTGGCGTCCGGAGGCATTCCTACAGACGAGGAGCAGGCCACCGGTCTGGAGAAGGTTGTGATGGAGGCCTCCAAGAAAGGAACCGATCCATATAGCATCTTGAAACCCAAGGAGTATGCAGGCTCCAAACAAGACCCTCATATCGTCCCCTCCATAACCAACAAGAGGATCGTCGGCTGTGTTTGTGAAGAGGACAATACTGCGGTGGTTTGGTTTTGGTTGCATCAGGGTGAGGCCCAGCGCTGCCCATCCTGTGGTGCTTACTACAAGCTTGTTCCACACGAGTTACCCCACTGAAACAAACACTCCCATACTGACTCAGTCACCACTGATAGTCAGACTTAGGCACATCTGTTCCGATGAATAGAGTTGCACTTTATAGGGGCCTGGTTAGTTCTTTCTCATTGGTTGCTTTACATAAGCATTGGCGGTACTTTCCTCATTGTgaattagttaatttttttggaCGAATAGTTAGCATGcgttatttttttgctgtgcaATATCAGCTGCTTACACATTCCAAACTTTCCTTAGAAATGCAAAGCATTCCTTGCCCTGTTACAAAAAGAGCTgttgcttaaaatgtaaaagcattaCACATTCTTGCAAAAGAGATAATGTCTACAgattctgtctttgttttttttccaaggtTTAGACAAAGATGGTACGTTCCCAATTCTGCGGGACTctaaatatatttccttttgaatgttttgagaTTGGATGCTTTCCTTGTTGaacaatactttaaaataaatgtggcGTTTCAACACA

Function

NR:

description
PREDICTED: cytochrome c oxidase subunit 5B, mitochondrial-like

GO:

id name namespace
GO:1902600 proton transmembrane transport biological_process
GO:0055114 oxidation-reduction process biological_process
GO:0005740 mitochondrial envelope cellular_component
GO:0004129 cytochrome-c oxidase activity molecular_function

KEGG:

id description
K02265 COX5B; cytochrome c oxidase subunit 5b

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043247354.1 True 922 mRNA 0.46 4 20917028 20919100

Neighbor

gene id symbol gene type direction distance location
tcf7l1b tcf7l1,tcf7l1b,LOC107721095,LOC107556226,LOC107747791,LOC107563849,LOC107698102,LOC108265410,LOC106585616 coding downstream 94976 20771693 ~ 20822052 (-)
tgoln2 NA coding downstream 154541 20757808 ~ 20762487 (-)
stambpb stambpb,LOC107714511,LOC107721092,LOC107678409,LOC107563848,LOC103470718 coding downstream 160181 20748439 ~ 20756847 (-)
ccn1l2 LOC107698087,LOC107556215,LOC107563854,LOC107678465,LOC107714581,LOC107721104 coding downstream 209832 20700023 ~ 20707196 (-)
si:dkey-90l8.3 si:dkey-90l8.3,LOC107714563,LOC107698086,LOC107556214,LOC107563853,LOC103024553,LOC108426648,LOC108264996 coding downstream 220338 20690830 ~ 20696690 (-)
LOC122350417 phyhip,LOC107747796,LOC107721105,LOC107698112,LOC107556234,LOC107678475,LOC108426626 coding upstream 12850 20931950 ~ 20943305 (-)
klhl22 klhl22,LOC107747800,LOC107563177,LOC107698116,LOC107678468,LOC107556236 coding upstream 187760 21106860 ~ 21129774 (-)
LOC122349897 NA coding upstream 263624 21182724 ~ 21183689 (-)
LOC122349890 NA coding upstream 311654 21230754 ~ 21232347 (-)
nkx3-1 LOC107710828,LOC107665190 coding upstream 468591 21387691 ~ 21389140 (-)
G65728 dbnl non-coding downstream 24399 20886224 ~ 20892629 (-)
G65732 NA non-coding downstream 35595 20881022 ~ 20881433 (-)
G65717 NA non-coding downstream 191574 20723266 ~ 20725454 (-)
G65704 NA non-coding downstream 306105 20610562 ~ 20610923 (-)
G65697 NA non-coding downstream 346735 20567158 ~ 20570293 (-)
G65750 NA non-coding upstream 7511 20926611 ~ 20926980 (-)
G65752 NA non-coding upstream 9162 20928262 ~ 20928477 (-)
G65759 NA non-coding upstream 30098 20949198 ~ 20951698 (-)
G65764 NA non-coding upstream 37834 20956934 ~ 20957958 (-)
G65792 NA non-coding upstream 89875 21008975 ~ 21012134 (-)
LOC122350336 LOC107714596,LOC107556216,LOC107698089 other downstream 193873 20718940 ~ 20723155 (-)
LOC122350560 ppia,LOC107566959,LOC107756826,LOC107722982,LOC107591936,LOC107691583 other downstream 495732 20415065 ~ 20421296 (-)
zgc:154046 adamts13,zgc:154046,LOC107702807,LOC107548275,LOC107722731,LOC107702859,LOC108426726,LOC108265337,LOC107740996,LOC107565124,LOC107691587 other downstream 782683 20118007 ~ 20134345 (-)
si:ch211-218o21.4 si:ch211-218o21.4,LOC107550930,LOC107702847,LOC107727198,LOC107747209,LOC107683911 other downstream 1483737 19428738 ~ 19433291 (-)
LOC122351133 NA other downstream 1714651 19202277 ~ 19202377 (-)
gna14a gna14a,gna14,LOC107698092,LOC107678467,LOC107556222,LOC107721075,LOC108426707,LOC108265545 other upstream 95893 21014993 ~ 21025831 (-)
G66086 si:dkey-32e23.4,LOC107678420,LOC107562650,LOC107728358,LOC107710834 other upstream 852368 21771468 ~ 21776620 (-)
G66090 NA other upstream 865604 21784704 ~ 22254189 (-)
G66119 gfpt1,LOC107710818,LOC107752562,LOC107678434,LOC102792631 other upstream 1094873 22013973 ~ 22025791 (-)
G66116 gfpt1,LOC107710818,LOC107678434,LOC107562636,LOC107553119,LOC107752562,LOC108426669,LOC103362312,LOC101170101 other upstream 1109632 22028732 ~ 22031993 (-)

Expression


Co-expression Network