mapkapk2b (mapkapk2b,LOC107683909,LOC107550950,LOC107726784,LOC107747217,LOC107576554)


Basic Information

Item Value
gene id mapkapk2b
gene name mapkapk2b,LOC107683909,LOC107550950,LOC107726784,LOC107747217,LOC107576554
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 19567279 ~ 19571233 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043247422.1
ATGTTAGAtgagacagaaaataaaaatgattcagtgCTTTCCAATGAGCATCAAGAAAGTCAGCATCAGATTAACATTTTGCCTCCAGAGTCGATGCTGAAATCCACACTGAAGATAAAGAAGAAAGTAATAACAGAGGAGTATAAGCTTGCAGGACAAGTTCTTGGGATAGGAATCAACGGCAAGGTCTGGGAAATATTCCAGAAGAAAAGTGGCAAAAACTACGCACTAAagATGTTGCGGGACACTCCTAAGGCTCGAAGGGAAGTGGAGCTTCACTGCAGGGCGTCCATCTGCCCCCTTATTGTAGGAATTGAAGATGTCTTTGAGAATTACTACCAAGGCAAAAAGTGCTTGCTTCTCATCATGGAGTGTATGGAGGGGGGAGAACTCTTTCGACACATTAAGGAACATGGTGATCAAGCTTTCACTGAAAGAGAAGCCTCAGAAATTATGAGAAATATAGGAGAAGCCGTGGAGTTTCTGCATGGTATTAACATTGCTCACAGAGACCTCaagCCAGAGAATCTACTGTACTCTTCAAAGCAACCGGATGCCCAGCTCAAGCTTACAGACTTCGGATTCGCCAAAGAGACCACATCCAACAAATGCTTGGCCACCCCGTGCTATACACCTTATTATGTGGCCCCCGAGGTGTTCGGTCCAGAGAAATACGATAAGTCATGTGACATGTGGTCATTAGGAGTCATCATGTACATCCTGTTATGCGGGTATCCACCATTTTACTCAAACCACGGCTTACCGCTCTCACCGGGAATGAAAAAACGCATTCGAAACGGCCAGTATGAATTTCCCAACCCCGAATGGTCACAGGTGTCGGAGGAAGCAAAGCAGCTCATTTGCCAGCTACTGAAAACAGACCCTACGGAGAGAATGACCATCACACAGTTCATGAACCATTCTTGGATCAATATGTCGATGAATGTTCCTCCAACACATCTACACACAAGTCGAGTTCTTAAGGAAGAGAGTCACGTCTGGGATAAAGTCAAGGAAGAGATGACTAACGCCTTAGCAACATTAAGAGTGGACTATGAACAAATAAAGATCAAACCGATCAAGGATGCGTCCAATCCTCTTCTtctgaaaagaagaaagaaaatggcCGCTGCAATGGAAGAAGCACAAGGACCGTGA

Function

symbol description
mapkapk2b Predicted to enable calmodulin binding activity; mitogen-activated protein kinase binding activity; and protein serine/threonine kinase activity. Predicted to be involved in several processes, including cellular response to vascular endothelial growth factor stimulus; protein phosphorylation; and vascular endothelial growth factor receptor signaling pathway. Predicted to act upstream of or within protein phosphorylation. Predicted to be active in cytoplasm and nucleus. Orthologous to human MAPKAPK2 (MAPK activated protein kinase 2).

NR:

description
PREDICTED: MAP kinase-activated protein kinase 2-like

GO:

id name namespace
GO:0006468 protein phosphorylation biological_process
GO:0005524 ATP binding molecular_function
GO:0004674 protein serine/threonine kinase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043247422.1 True 1158 mRNA 0.44 10 19567279 19571233

Neighbor

gene id symbol gene type direction distance location
csf1b csf1b,LOC107683886,LOC107747213,LOC107702844 coding upstream 90623 19464595 ~ 19476656 (+)
ren ren,LOC107747224,LOC107727110,LOC107570508,LOC107550929 coding upstream 110523 19451487 ~ 19456756 (+)
kdm5c LOC107747206,LOC107550909,LOC107683899,LOC107570512,LOC107724909,LOC107702826 coding upstream 143467 19406564 ~ 19423812 (+)
iqsec2b iqsec2,LOC107747221,LOC107683900,LOC107702804,LOC107570507,LOC107550910,LOC107725888 coding upstream 161795 19347902 ~ 19405484 (+)
LOC122349946 LOC107747205,LOC107683889,LOC556872 coding upstream 220704 19284717 ~ 19346575 (+)
fmodb fmodb,LOC107683908,LOC107747218,LOC107726688,LOC107575999,LOC107702840 coding downstream 1078 19572311 ~ 19577890 (+)
LOC122350022 NA coding downstream 11079 19582312 ~ 19583244 (+)
LOC122350024 LOC107683897,LOC107735514 coding downstream 18351 19589584 ~ 19590513 (+)
LOC122350025 LOC107683897,LOC107735514 coding downstream 25345 19596578 ~ 19600117 (+)
adrb3a adrb3a,LOC107683881,LOC107740977,LOC107550948,LOC107569580,LOC107724439,LOC107702835 coding downstream 92895 19664128 ~ 19684051 (+)
G65268 NA non-coding upstream 8110 19558873 ~ 19559169 (+)
G65267 NA non-coding upstream 8793 19557544 ~ 19558486 (+)
G65119 NA non-coding upstream 85236 19405656 ~ 19482043 (+)
G65111 NA non-coding upstream 141557 19424019 ~ 19425722 (+)
G65108 NA non-coding upstream 220235 19183690 ~ 19347044 (+)
G65284 NA non-coding downstream 123147 19694380 ~ 19752601 (+)
G65295 rab11fip1,LOC107579780,LOC107683894,LOC107724309,LOC107565115,LOC107740979 non-coding downstream 188237 19759470 ~ 19780752 (+)
G65361 NA non-coding downstream 368874 19940107 ~ 19940869 (+)
G65403 LOC107702858,LOC107723482 non-coding downstream 468713 20039946 ~ 20040563 (+)
G65402 NA non-coding downstream 478734 20049967 ~ 20053522 (+)
pqbp1 pqbp1,LOC107702814,LOC107683912,LOC107747222 other upstream 293509 19272092 ~ 19273770 (+)
LOC122350733 LOC107702875,LOC107722994,LOC107591954,LOC107573969,LOC107722996,LOC107691581 other upstream 365592 19199988 ~ 19201687 (+)
G65105 LOC107747205,LOC107550912,LOC107683889,LOC108412149 other upstream 414974 19119944 ~ 19152305 (+)
G65100 sf3a1,LOC107564451,LOC107550953 other upstream 471208 19094947 ~ 19096071 (+)
si:ch211-158d24.2 si:ch211-158d24.2,LOC107550960,LOC107703181,LOC107676623,LOC107728434,LOC107571139,LOC107753137 other upstream 845033 18695454 ~ 18722246 (+)
rfk rfk,LOC107740987,LOC107723557 other downstream 458801 20030034 ~ 20033607 (+)
timm17b timm17b,LOC107722912 other downstream 563886 20135119 ~ 20139364 (+)
LOC122350816 slc18a1,LOC107702874,LOC107722997,LOC107591929,LOC107756821,LOC107566956 other downstream 852048 20423281 ~ 20431832 (+)
rnf122 si:ch1073-392o20.1,rnf122,LOC107747807,LOC107678386,LOC107698113,LOC108440685,LOC107563167 other downstream 1387367 20958600 ~ 20972040 (+)
ankrd39 LOC107721080,LOC107678427,LOC107559444 other downstream 1631215 21202448 ~ 21204346 (+)

Expression


Co-expression Network