prkg1l (LOC107553164,LOC107710842,LOC107678373,LOC107562631,LOC107665193,LOC107716608,LOC107728357)


Basic Information

Item Value
gene id prkg1l
gene name LOC107553164,LOC107710842,LOC107678373,LOC107562631,LOC107665193,LOC107716608,LOC107728357
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 21730654 ~ 21751680 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043247486.1
CTGACGGTTGGTGGCGACCTGTAGTATTAAGAAGCGGCTTTTTAACGGCGCGCTTCACATTTCGGGTGcgtagttgttgttgttgttttttttttgcattgttagatataaaaaggaaagaaaaagatagtCTACGAAAAGAACAGAGAATCTAGTGTTTGTTTTCGTATTAAGAAAACAAGCAATTGGTAAACGATCAAAAACATTGATCTAAAACATTAAGGAAACTGTCAGATCTGTACAGCACTACGTTTCCCATAAGGACTCTTCCTCCTCACTTTGAAGAGCTTATATTTCAGAGATTATCATTTTTAAGCTGTCCAGAGATTTGTTCACTATAAAGAAGCTCTGCATCGTTCATCTCCACCCAGCCGTGACAAAAAAGATAGCCGAATAACAAGGGTGCATTGACATTTTCTTAAAAGTATCcttcgattctgattggttgactgCAATGTTCCACCTGAGATGGTCTTCACTGCAGAGCACGAGATCCAGGGGTGAGGACACTTTGCAAAGAAACTAAAGAAAACATCCTGCAccgttttaaatctgaaagagcACCGTTTAAAAAGCTGAAgcgtctttaaaaagaaagagtcgactctgaatcgtTCAAAAGAGTTTCTTAAATGAGTCCCAAGAGGTTTCACGTTGACGTCAAAATGacacattagcatattgcccgcccccTTGTTGCTCCAAAATTCATTAAATGCCGCTAGACGCTGCATTTGTTTCGCTGCTTTAAAGATCGAGATTGgtggggtttggaaaaattaatttggcagtcgttgaacaaatagtgtaaaaataaatgagctcGAATGCAATGAAAACGGGTTATTTTGTTGCAGAGTTTCATGCAACTCATAGGCTATAGTTGTGTTTAATTCTCTGTGAATGTAGCCCTGcccacatctctctctctctctctctctctctctctctctctctctctctctctctctctctctcgaggtGGAGATATGATTCAAACACTCACACTCGGGTTTTCTTCAGTATTCTTAAAGCTGACCAGCTCCATCATTCTAGACGGGAAATCGCCTTCGGTCTGTTTGCATTCCCCATGTTTCTTGTTCAGGTCCATCGCTCCTGATGGGGACTCTCAGAGACCTCCAGTTCGCACTTCAGCTGAAGATCGAGGAGTTGCGGCAGAGAGATGCTCTCATCGACGAGCTGGAGCTGGAGCTGGACGCTAAAGATGATCTGATCCGCCGCCTGCAGGGGGAGCTCGACCGTCTGCGGCTCTCCGCCCCGGGCGCCTCGGCAGCCGgTCAACAACGTGCTTCTTCCCTGAGAGTGAGGAGAAAAGCGCTGCTGACAGAACCAGTTACCTTGGAGCCCAAACTAGTCTTGCAAAACCCACCAATCAGCCACAGCAAGAGTCAAGAgtCACAGCGGCTGATAGAAGCGGCTCTGGCAGAAAATGAGTGTATGAAATATCTAGACGGGGATCAGATGCGGTGTTTGGTGGATTCTGCCTGTCCCCTGACGCTCAAACAGGGTGTGAGTGTTGTCCAGGAAGGGGATGATGGGACCCAGGCATATATAGTTGAAGaggGAAAGCTGGAGGCATCCAGGGCTGGCCAGAGGCTGCACATCATTGAGCCGGGGATGATGTTTGAAGAACTGGCCCTCGTTTATAACCACACCTGCTCCGCTACTGTCACAGctctGGTGAACAGCAGGTTGTGGGTGATGGAGGGTCAGGTGTTTCAGAGGATCATGCAGAGGAACGGCCTCATCGCTATCACACAGTCTCTGCACTTCCTGCGCAGTGTGCCACTGCTCTGTGTGTTTCCAGAGGATGTTCTTGCGAAAGTGTCTGATTCACTGGAGGAGTCTCACTACAATGATGGTGATTATATCATTCGAAATGGAAATCCAGGAGATAAACTGTACATTCTGAGTCAAGGCCAGGTGAAAGTATTAGAGAAGCACTCGGCCAGTGAGGAAAGCATGACGGTGTCTGTCCTCACCAGAGGGGATTGTTTTGGAGAGAGAGGAGACGACGCGAGGTCGATGAGCGCTCTTGCCGCAGGCGATGTGACATGTCTGGTCGTAGACAGAGAGGTTTTCAAAAAAGTAACTGGAGGTTCGGATGATGCCAGGAAAAATCCTAGCAACAAGGCCAGATCGAAGGCAGACGAAGATGGTTCTGTGTTTGGAGAAACGTCTCTCGGCAGTTTTCAGATGCTGTTTAATCTTGGAGAAGGACAGTACGGTCACACTCAGCTCGTCCATTTGAAGAGCGACTCCAACTGTAAGTTTGCATTGAAGACCATTAGAAAGCAGGCCCTACAGAGCCCAGGCCAAAGAGAGAGGATCCTTGCAGAGAAACACATCCTGATGGATCTCCAGAGTCCATTTATAGTGAGGTTGCATTGTACGTATAAAGATGCTCGGTGCCTATATATGCTGATGGAGGCTTGTGAAGGTGGAGATCTGTGGAATTTACTGAGAGAGAGGGGGTCGCTGGAAGAAGATGCCGTTTGCTTCTACGCAGCGTGTGTGCTGGAAGCTCTAAGTGTACTACACGCCAAAGACATTGTTCACAGAGACCTGAAACCTGAAAATGTGCTCCTGGACCAGCGAGGATACGCTAAACTGACGGGGTTTGGTTGTGCTAAGAAGCTGGGCTCTTTGCGCAGAGCCTGGTCGTTCTGCGGGTCTGTGGGTTATCAGCCTCCAGAGGTCATTCTGCATCAAGGTCACGGCCTGTCCACAGATCTCTGGGCTCTAGGGATGCTGCTGTATGAATTGCTCAATGGCAGTCCCCTGTTCTCCGGCTCGGAGCAGCTGAAGGTTTATACGGCATCTCTGAAGGGAATAGATGAGCTAGAGCTCCCAAAAACCATCAGCAGGACTGCAGCACATCTCATCAAGAGCCTCTGCAGGCTAAACTCCTCAGAGAGACTGGGTCTGAGGAACGGGGTCAAGGACGTCCGCAAACACATGTGGTTTGAAAGCTTCGACTGGGAAGGACTTCAGAAGGGCACACTGACTCCACCAGTGATACCAAACCTTCCCTGTGTCTCTGATCACGGAGGACCAGCGCTCCCGCCGGAAACACACAGCGAAGCAGCACCACTGGAGGATTCGGACTGGGACGCAGACTTCTGATCCGTACAGCGGGGATACTGACCAAGTAAACTGGGCAAAGAAATAATGGACCCTGGTGTTGATCTTGCATTGACTTTGCAGTCTTTTCATTTGTTACTTTTGAGTTGCATTGCACTTCAAATGTCGCtctaaaaaatgcaaatgtacatCATTTCTATTACattccttttttaaatgaaagcttATTTGtgtcagaataaaaatatacaaatagca
>XM_043247487.1
CTGACGGTTGGTGGCGACCTGTAGTATTAAGAAGCGGCTTTTTAACGGCGCGCTTCACATTTCGGGTGcgtagttgttgttgttgttttttttttgcattgttagatataaaaaggaaagaaaaagatagtCTACGAAAAGAACAGAGAATCTAGTGTTTGTTTTCGTATTAAGAAAACAAGCAATTGGTAAACGATCAAAAACATTGATCTAAAACATTAAGGAAACTGTCAGATCTGTACAGCACTACGTTTCCCATAAGGACTCTTCCTCCTCACTTTGAAGAGCTTATATTTCAGAGATTATCATTTTTAAGCTGTCCAGAGATTTGTTCACTATAAAGAAGCTCTGCATCGTTCATCTCCACCCAGCCGTGACAAAAAAGATAGCCGAATAACAAGGGTGCATTGACATTTTCTTAAAAGTATCcttcgattctgattggttgactgCAATGTTCCACCTGAGATGGTCTTCACTGCAGAGCACGAGATCCAGGGgtGGAGATATGATTCAAACACTCACACTCGGGTTTTCTTCAGTATTCTTAAAGCTGACCAGCTCCATCATTCTAGACGGGAAATCGCCTTCGGTCTGTTTGCATTCCCCATGTTTCTTGTTCAGGTCCATCGCTCCTGATGGGGACTCTCAGAGACCTCCAGTTCGCACTTCAGCTGAAGATCGAGGAGTTGCGGCAGAGAGATGCTCTCATCGACGAGCTGGAGCTGGAGCTGGACGCTAAAGATGATCTGATCCGCCGCCTGCAGGGGGAGCTCGACCGTCTGCGGCTCTCCGCCCCGGGCGCCTCGGCAGCCGgTCAACAACGTGCTTCTTCCCTGAGAGTGAGGAGAAAAGCGCTGCTGACAGAACCAGTTACCTTGGAGCCCAAACTAGTCTTGCAAAACCCACCAATCAGCCACAGCAAGAGTCAAGAgtCACAGCGGCTGATAGAAGCGGCTCTGGCAGAAAATGAGTGTATGAAATATCTAGACGGGGATCAGATGCGGTGTTTGGTGGATTCTGCCTGTCCCCTGACGCTCAAACAGGGTGTGAGTGTTGTCCAGGAAGGGGATGATGGGACCCAGGCATATATAGTTGAAGaggGAAAGCTGGAGGCATCCAGGGCTGGCCAGAGGCTGCACATCATTGAGCCGGGGATGATGTTTGAAGAACTGGCCCTCGTTTATAACCACACCTGCTCCGCTACTGTCACAGctctGGTGAACAGCAGGTTGTGGGTGATGGAGGGTCAGGTGTTTCAGAGGATCATGCAGAGGAACGGCCTCATCGCTATCACACAGTCTCTGCACTTCCTGCGCAGTGTGCCACTGCTCTGTGTGTTTCCAGAGGATGTTCTTGCGAAAGTGTCTGATTCACTGGAGGAGTCTCACTACAATGATGGTGATTATATCATTCGAAATGGAAATCCAGGAGATAAACTGTACATTCTGAGTCAAGGCCAGGTGAAAGTATTAGAGAAGCACTCGGCCAGTGAGGAAAGCATGACGGTGTCTGTCCTCACCAGAGGGGATTGTTTTGGAGAGAGAGGAGACGACGCGAGGTCGATGAGCGCTCTTGCCGCAGGCGATGTGACATGTCTGGTCGTAGACAGAGAGGTTTTCAAAAAAGTAACTGGAGGTTCGGATGATGCCAGGAAAAATCCTAGCAACAAGGCCAGATCGAAGGCAGACGAAGATGGTTCTGTGTTTGGAGAAACGTCTCTCGGCAGTTTTCAGATGCTGTTTAATCTTGGAGAAGGACAGTACGGTCACACTCAGCTCGTCCATTTGAAGAGCGACTCCAACTGTAAGTTTGCATTGAAGACCATTAGAAAGCAGGCCCTACAGAGCCCAGGCCAAAGAGAGAGGATCCTTGCAGAGAAACACATCCTGATGGATCTCCAGAGTCCATTTATAGTGAGGTTGCATTGTACGTATAAAGATGCTCGGTGCCTATATATGCTGATGGAGGCTTGTGAAGGTGGAGATCTGTGGAATTTACTGAGAGAGAGGGGGTCGCTGGAAGAAGATGCCGTTTGCTTCTACGCAGCGTGTGTGCTGGAAGCTCTAAGTGTACTACACGCCAAAGACATTGTTCACAGAGACCTGAAACCTGAAAATGTGCTCCTGGACCAGCGAGGATACGCTAAACTGACGGGGTTTGGTTGTGCTAAGAAGCTGGGCTCTTTGCGCAGAGCCTGGTCGTTCTGCGGGTCTGTGGGTTATCAGCCTCCAGAGGTCATTCTGCATCAAGGTCACGGCCTGTCCACAGATCTCTGGGCTCTAGGGATGCTGCTGTATGAATTGCTCAATGGCAGTCCCCTGTTCTCCGGCTCGGAGCAGCTGAAGGTTTATACGGCATCTCTGAAGGGAATAGATGAGCTAGAGCTCCCAAAAACCATCAGCAGGACTGCAGCACATCTCATCAAGAGCCTCTGCAGGCTAAACTCCTCAGAGAGACTGGGTCTGAGGAACGGGGTCAAGGACGTCCGCAAACACATGTGGTTTGAAAGCTTCGACTGGGAAGGACTTCAGAAGGGCACACTGACTCCACCAGTGATACCAAACCTTCCCTGTGTCTCTGATCACGGAGGACCAGCGCTCCCGCCGGAAACACACAGCGAAGCAGCACCACTGGAGGATTCGGACTGGGACGCAGACTTCTGATCCGTACAGCGGGGATACTGACCAAGTAAACTGGGCAAAGAAATAATGGACCCTGGTGTTGATCTTGCATTGACTTTGCAGTCTTTTCATTTGTTACTTTTGAGTTGCATTGCACTTCAAATGTCGCtctaaaaaatgcaaatgtacatCATTTCTATTACattccttttttaaatgaaagcttATTTGtgtcagaataaaaatatacaaatagca
>XM_043247488.1
CTGACGGTTGGTGGCGACCTGTAGTATTAAGAAGCGGCTTTTTAACGGCGCGCTTCACATTTCGGGTGcgtagttgttgttgttgttttttttttgcattgttagatataaaaaggaaagaaaaagatagtCTACGAAAAGAACAGAGAATCTAGTGTTTGTTTTCGTATTAAGAAAACAAGCAATTGGTAAACGATCAAAAACATTGATCTAAAACATTAAGGAAACTGTCAGATCTGTACAGCACTACGTTTCCCATAAGGACTCTTCCTCCTCACTTTGAAGAGCTTATATTTCAGAGATTATCATTTTTAAGCTGTCCAGAGATTTGTTCACTATAAAGAAGCTCTGCATCGTTCATCTCCACCCAGCCGTGACAAAAAAGATAGCCGAATAACAAGGGTGCATTGACATTTTCTTAAAAGTATCcttcgattctgattggttgactgCAATGTTCCACCTGAGATGGTCTTCACTGCAGAGCACGAGATCCAGGGGTGAGGACACTTTGCAAAGAAACTAAAGAAAACATCCTGCAccgttttaaatctgaaagagcACCGTTTAAAAAGCTGAAgcgtctttaaaaagaaagagtcgactctgaatcgtTCAAAAGAGTTTCTTAAATGAGTCCCAAGAGGTTTCACGTTGACGTCAAAATGacacattagcatattgcccgcccccTTGTTGCTCCAAAATTCATTAAATGCCGCTAGACGCTGCATTTGTTTCGCTGCTTTAAAGATCGAGATTGgtggggtttggaaaaattaatttggcagtcgttgaacaaatagtgtaaaaataaatgagctcGAATGCAATGAAAACGGGTTATTTTGTTGCAGAGTTTCATGCAACTCATAGGCTATAGTTGTGTTTAATTCTCTGTGAATGTAGCCCTGcccacatctctctctctctctctctctctctctctctctctctctctctctctctctctctctcgaggtGGAGATATGATTCAAACACTCACACTCGGGTTTTCTTCAGTATTCTTAAAGCTGACCAGCTCCATCATTCTAGACGGGAAATCGCCTTCGGTCTGTTTGCATTCCCCATGTTTCTTGTTCAGGTCCATCGCTCCTGATGGGGACTCTCAGAGACCTCCAGTTCGCACTTCAGCTGAAGATCGAGGAGTTGCGGCAGAGAGATGCTCTCATCGACGAGCTGGAGCTGGAGCTGGACGCTAAAGATGATCTGATCCGCCGCCTGCAGGGGGAGCTCGACCGTCTGCGGCTCTCCGCCCCGGGCGCCTCGGCAGCCGgTCAACAACGTGCTTCTTCCCTGAGAGTGAGGAGAAAAGCGCTGCTGACAGAACCAGTTACCTTGGAGCCCAAACTAGTCTTGCAAAACCCACCAATCAGCCACAGCAAGAGTCAAGAgtCACAGCGGCTGATAGAAGCGGCTCTGGCAGAAAATGAGTGTATGAAATATCTAGACGGGGATCAGATGCGGTGTTTGGTGGATTCTGCCTGTCCCCTGACGCTCAAACAGGGTGTGAGTGTTGTCCAGGAAGGGGATGATGGGACCCAGGCATATATAGTTGAAGaggGAAAGCTGGAGGCATCCAGGGCTGGCCAGAGGCTGCACATCATTGAGCCGGGGATGATGTTTGAAGAACTGGCCCTCGTTTATAACCACACCTGCTCCGCTACTGTCACAGctctGGTGAACAGCAGGTTGTGGGTGATGGAGGGTCAGGTGTTTCAGAGGATCATGCAGAGGAACGGCCTCATCGCTATCACACAGTCTCTGCACTTCCTGCGCAGTGTGCCACTGCTCTGTGTGTTTCCAGAGGATGTTCTTGCGAAAGTGTCTGATTCACTGGAGGAGTCTCACTACAATGATGGTGATTATATCATTCGAAATGGAAATCCAGGAGATAAACTGTACATTCTGAGTCAAGGCCAGGTGAAAGTATTAGAGAAGCACTCGGCCAGTGAGGAAAGCATGACGGTGTCTGTCCTCACCAGAGGGGATTGTTTTGGAGAGAGAGGAGACGACGCGAGGTCGATGAGCGCTCTTGCCGCAGGCGATGTGACATGTCTGGTCGTAGACAGAGAGGTTTTCAAAAAAGTAACTGGAGGTTCGGATGATGCCAGGAAAAATCCTAGCAACAAGGCCAGATCGAAGGCAGACGAAGATGGTTCTGTGTTTGGAGAAACGTCTCTCGGCAGTTTTCAGATGCTGTTTAATCTTGGAGAAGGACAGTACGGTCACACTCAGCTCGTCCATTTGAAGAGCGACTCCAACTGTAAGTTTGCATTGAAGACCATTAGAAAGCAGGCCCTACAGAGCCCAGGCCAAAGAGAGAGGATCCTTGCAGAGAAACACATCCTGATGGATCTCCAGAGTCCATTTATAGTGAGGTTGCATTGTACGTATAAAGATGCTCGGTGCCTATATATGCTGATGGAGGCTTGTGAAGGTGGAGATCTGTGGAATTTACTGAGAGAGAGGGGGTCGCTGGAAGAAGATGCCGTTTGCTTCTACGCAGCGTGTGTGCTGGAAGCTCTAAGTGTACTACACGCCAAAGACATTGTTCACAGAGACCTGAAACCTGAAAATGTGCTCCTGGACCAGCGAGGATACGCTAAACTGGTGCTGAACACACGGGGTTTGGTTGTGCTAAGAAGCTGGGCTCTTTGCGCAGAGCCTGGTCGTTCTGCGGGTCTGTGGGTTATCAGCCTCCAGAGGTCATTCTGCATCAAGGTCACGGCCTGTCCACAGATCTCTGGGCTCTAGGGATGCTGCTGTATGAATTGCTCAATGGCAGTCCCCTGTTCTCCGGCTCGGAGCAGCTGAAGGTTTATACGGCATCTCTGAAGGGAATAGATGAGCTAGAGCTCCCAAAAACCATCAGCAGGACTGCAGCACATCTCATCAAGAGCCTCT

Function

NR:

description
PREDICTED: cGMP-dependent protein kinase 1-like isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043247486.1 True 3363 mRNA 0.47 20 21730654 21751680
XM_043247487.1 False 2882 mRNA 0.49 21 21730654 21751680
XM_043247488.1 False 2928 mRNA 0.48 17 21733114 21751680

Neighbor

gene id symbol gene type direction distance location
acsl2 acsl2,LOC107710839,LOC107665192,LOC107553163,LOC107716609,LOC107678403,LOC108426687 coding downstream 1437 21697808 ~ 21729217 (-)
LOC122350763 ido1,LOC107553133,LOC107665200,LOC107710826,LOC107678376,LOC107718947 coding downstream 217334 21506779 ~ 21513320 (-)
stc1 stc1,LOC107747716,LOC107665189,LOC107553168,LOC107559448,LOC107678391 coding downstream 298533 21416772 ~ 21432121 (-)
nkx2.7 nkx2.7,LOC107710827,LOC107665191,LOC107747717,LOC107553134,LOC107678399,LOC107559447 coding downstream 328107 21400577 ~ 21402547 (-)
nkx3-1 LOC107710828,LOC107665190 coding downstream 341514 21387691 ~ 21389140 (-)
rab7b LOC107678421,LOC107562649,LOC107553159,LOC107728368,LOC103037223 coding upstream 5995 21757675 ~ 21765505 (-)
bmp1a bmp1a,LOC107710833,LOC107661342,LOC107678424,LOC108426680 coding upstream 103968 21855648 ~ 21919678 (-)
kansl3 kansl3,LOC107678435,LOC107661339,LOC107710832 coding upstream 172032 21923712 ~ 21943417 (-)
LOC122350992 LOC107756834,LOC107691567,LOC107548280,LOC107702864 coding upstream 288391 22040071 ~ 22054375 (-)
LOC122349886 NA coding upstream 393843 22145523 ~ 22146997 (-)
G66046 NA non-coding downstream 85971 21571117 ~ 21644683 (-)
G66047 NA non-coding downstream 92306 21603675 ~ 21638348 (-)
G65871 NA non-coding downstream 356063 21373243 ~ 21374591 (-)
G65897 entpd4,LOC107678413,LOC107747713,LOC107698120,LOC107553130 non-coding downstream 374938 21353762 ~ 21355716 (-)
G65896 entpd4,LOC107553130,LOC107698120,LOC107710847 non-coding downstream 377702 21349450 ~ 21352952 (-)
G66071 NA non-coding upstream 88 21751768 ~ 21753615 (-)
G66115 NA non-coding upstream 258963 22010643 ~ 22013678 (-)
LOC122350974 NA non-coding upstream 322007 22073687 ~ 22074471 (-)
G66131 NA non-coding upstream 541759 22293439 ~ 22295953 (-)
G66143 NA non-coding upstream 613221 22364901 ~ 22365113 (-)
gna14a gna14a,gna14,LOC107698092,LOC107678467,LOC107556222,LOC107721075,LOC108426707,LOC108265545 other downstream 704823 21014993 ~ 21025831 (-)
LOC122350336 LOC107714596,LOC107556216,LOC107698089 other downstream 1007499 20718940 ~ 20723155 (-)
LOC122350560 ppia,LOC107566959,LOC107756826,LOC107722982,LOC107591936,LOC107691583 other downstream 1309358 20415065 ~ 20421296 (-)
zgc:154046 adamts13,zgc:154046,LOC107702807,LOC107548275,LOC107722731,LOC107702859,LOC108426726,LOC108265337,LOC107740996,LOC107565124,LOC107691587 other downstream 1596309 20118007 ~ 20134345 (-)
si:ch211-218o21.4 si:ch211-218o21.4,LOC107550930,LOC107702847,LOC107727198,LOC107747209,LOC107683911 other downstream 2297363 19428738 ~ 19433291 (-)
G66086 si:dkey-32e23.4,LOC107678420,LOC107562650,LOC107728358,LOC107710834 other upstream 19788 21771468 ~ 21776620 (-)
G66090 NA other upstream 33024 21784704 ~ 22254189 (-)
G66119 gfpt1,LOC107710818,LOC107752562,LOC107678434,LOC102792631 other upstream 262293 22013973 ~ 22025791 (-)
G66116 gfpt1,LOC107710818,LOC107678434,LOC107562636,LOC107553119,LOC107752562,LOC108426669,LOC103362312,LOC101170101 other upstream 277052 22028732 ~ 22031993 (-)
LOC122350973 dmtn,LOC107586118,LOC107687659,LOC107720576,LOC107553712,LOC107705088,LOC107571963,LOC107702870,LOC107723027 other upstream 308335 22060015 ~ 22068757 (-)

Expression


Co-expression Network