orai1a (orai1a,orai1,LOC107550979,LOC107687980,LOC107703171,LOC107753099,LOC106585507)


Basic Information

Item Value
gene id orai1a
gene name orai1a,orai1,LOC107550979,LOC107687980,LOC107703171,LOC107753099,LOC106585507
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 18349093 ~ 18354266 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043247609.1
TTTCTTGTGGATCAGATGGTAGTGCCGAGCAAGTTACTGGGGTTAGTCATTTTACAATTTGAGTATGTCACAGCGAGTTGAAGGGCTTCGGCAAACATAAGAAGGGTAATCAAGAAGATACGAAGGCGATCTCGGCGTTAAGGCATAAAGCTTCAAACGTTCAAACCTTCTGAACGTACACCGAAACAAGCGCAATGAGTTTAAACGAACACTCGCTTCAAGCTTTGTCATGGAGAAAACTTTACTTGAGTCGAGCTAAACTTAAAGCGACCAGCAGAACCTCTGCTCTGCTCTCCGGCTTTGCCATGGTGGCGATGGTGGAGGTCCAGCTGGAGGACGATCACGAATACCCTCCCGGTCTATTGATCGCTTTCAGCGCCTGCACAACGGTGCTGGTGGCCGTCCATCTCTTTGCCTTGATGATCAGCACGTGCATCCTGCCCAACCTGGAGGCCGTGAGCAACGTCCACAACCTCAACTCCATAAAGGAGTCTCCGCACGAGCGGATGCACCGCCACATCGAGCTGGCCTGGGCCTTCTCCACCGTCATAGGcaccctcctcttcctcgcAGAGGTGGTTCTTCTCTGCTGGGTGAAGTTCCTGCCTCTGAAGAACAGAGGTAAAGATTCTGGCCCGTCGGAGAACGCGACCGAATCTTCAGGGATAAGCCCGGGCGAAGCTGCAGCCATCGCCTCCACCTCCATCATGGTGCCCTTCGGCTTGGTGTTTATCGTTTTCGCCGTGCATTTCTACCGTTCTCTGGTCAGCCACAAAACGGAGCGGCAGCACCAGGAGCTGGAGGTCCTGGCCAAAATCACACAGATGCAAAACCAACTGGATCACAGGGGAGACGCGTCCTCAGCACATTTCGCCTAGTTGATGCAAAACACGGACCGTTGTCTTTAACAGACAACGGATGACGGGAATCAGGGATTCTGAGATATAGCAATAGAATCACCGTATCGTGATGCCTGTGATGTTTTTTCTCGGTTCgtttgtttttgtatacatGCAAACATTTATAAAGATGGGAAATCTTTGCCGTTACGCTCTTTCAACCGGCTTTTCGAATCTTCTGTTTTTGCACAAatcggagaaaaaaaaataggtgttttttttttattacggtTTTGTAAATTTGGCACGTATTAAAATAGCCTGTTCTTCGCTGTTGGGAGTTTCTCGAATAAGAAAAAACATCGGACGAGACTCGATTTTGTCAAACGGGACATCGTCGGATAGTTTAAGAGCGGAGGGAAGATATTTCGATGGCGCATGATTTTTAGAAAacgaaaaaatatattttgttataaatagtgtaatataatatattccaTTACAAATAAGGATTGTCGCTGAAGTTAATAAATTCAAggataaaataacattaaagcatAACATtactatgaaaataaaaatacacggTTTTGAATCCCTCATTACTCGTCTTGCTCAATTTCAACGTTTTTTTCAGTGGTTTGGATGCTTCCGGCTTGGAAAATGTATATAGCTGCACGATTAAAAAGCGAAATAATACAGACttaggtgtttttttaacatgttattGACTGGTCGATTGAATAGGGACACCAGCATGTTTGCCAGAGCTGCTTGTCGTTGTTCCAGTTCAGTATTTCCATACACTGTTAGGCCAAATCATTAAACCCCAAACGCTTAGAAAGTTTCCCAGTGTTTATGACAACCCATCCGTTTTcctttttgttcagtttaactGCATCACGTCCGTACTTTTTCTACAGTGTGGACTTTTACCTCGTGAGCGACAGTGTCATAACGGCGTGCATGAAACATGTACGTTCGgaataacattttcttaaaaccCGCTTCTTGAGAAttgctggaattttttttttattttatgatattctGTGATTCAGTCAAACGGTATGTTGCGGGTCGCTTCGTTTCAATCCTTGATGTGCTCAGGCCGTGTGAAAACATGTCGGCATCGCCGTCGTTTAAGCCATTAAGACCAGAAACCATCCTTTTCTGGAAGCTTTATCTTGCTTCGAGGTTACAAGCAGCTcagatgtatatataaatattgtatattttctttttctctgtttgttcAGCATGCCTTTGGTTGTGTGAACACAACATGTGGacttttaaaatagatatttcaAAACGCCTTTGCCGTGAAGAGGCTATTATACTCTTATAATGTGTTTACAGATGTAGTCTTGTATTTTGAGGAGgattttgagcatttttatttggaagatattttttcaaattcgTCAGGCCACTTTTATCTTCTGCCATCACAACAGACGCTGATCGACATGTTTCGAGTACTTCTTTGAAAGTCCTTGACTCACAATTTCTagatacattttatgttttgctgtttgaattgtattcatattttatatacagattACCTTTACCCTATTTTTGTAAACCTATTAATATCCCCGCTTAATGAGGGTGAAATGAAACCTTATTTTCGTATTTCTTGATTTTTAGATGATACTAGAGTTgtgagatgttttattttaaggcaCTTTTATGTCAAATAGAAAATGTGCGTTcgccaaataaaaatgtctaagCGGAAAAA

Function

symbol description
orai1a Predicted to enable store-operated calcium channel activity. Predicted to be involved in store-operated calcium entry. Predicted to be integral component of membrane. Predicted to be active in membrane. Is expressed in several structures, including brain; head; liver; pleuroperitoneal region; and skeletal muscle. Human ortholog(s) of this gene implicated in immunodeficiency 9 and tubular aggregate myopathy 2. Orthologous to human ORAI1 (ORAI calcium release-activated calcium modulator 1).
orai1 Enables identical protein binding activity and store-operated calcium channel activity. Involved in calcium ion transport; positive regulation of adenylate cyclase activity; and positive regulation of calcium ion transport. Located in cytosol and plasma membrane raft. Is integral component of plasma membrane. Implicated in immunodeficiency 9 and tubular aggregate myopathy 2.

NR:

description
PREDICTED: calcium release-activated calcium channel protein 1

GO: NA

KEGG:

id description
K16056 ORAI1; calcium release-activated calcium channel protein 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043247609.1 True 2589 mRNA 0.42 2 18349093 18354266

Neighbor

gene id symbol gene type direction distance location
rnf34a rnf34a,rnf34,LOC107687978,LOC107712480,LOC107703169 coding upstream 15380 18326458 ~ 18333713 (+)
ggt5a ggt5a,LOC107703163,LOC107753105,LOC107712462,LOC107550924,LOC107580168 coding upstream 107863 18233930 ~ 18241230 (+)
hnf1a hnf1a,LOC107712475,LOC107687971,LOC107550982 coding upstream 242286 18098897 ~ 18106807 (+)
si:ch211-170d8.2 LOC107550939,LOC107753111,LOC107703157,LOC107554433,LOC107687993,LOC107712458 coding upstream 250790 18095035 ~ 18098303 (+)
hps4 LOC107712456,LOC107753110,LOC107687970,LOC107703156,LOC107554431,LOC107550983 coding upstream 254453 18086790 ~ 18094640 (+)
gck gck,LOC107657322,LOC107550933,LOC107712466,LOC107753094,LOC107703174 coding downstream 53820 18408086 ~ 18417020 (+)
LOC122350731 LOC107703135,LOC107753145,LOC107550932,LOC107712468,LOC107657321 coding downstream 88809 18443075 ~ 18447061 (+)
dusp2 dusp2,LOC107657330,LOC107712482,LOC107550972,LOC107554416,LOC107703175 coding downstream 99310 18453576 ~ 18456539 (+)
zgc:152830 zgc:152830,LOC107550967,LOC107657328,LOC107703177,LOC107554415,LOC107712486 coding downstream 254449 18608715 ~ 18614892 (+)
olfml2a olfml2a,LOC107657324,LOC107550966,LOC107554414,LOC107703179 coding downstream 280030 18634296 ~ 18651554 (+)
G64855 NA non-coding upstream 310 18347437 ~ 18348783 (+)
G64841 NA non-coding upstream 61552 18287296 ~ 18287541 (+)
G64835 NA non-coding upstream 124392 18224397 ~ 18224701 (+)
LOC122351024 NA non-coding upstream 190503 18153643 ~ 18158590 (+)
G64665 NA non-coding upstream 689775 17359434 ~ 17659318 (+)
G64858 NA non-coding downstream 12304 18366570 ~ 18367110 (+)
G64862 NA non-coding downstream 36408 18390674 ~ 18391211 (+)
G64878 NA non-coding downstream 96776 18451042 ~ 18451364 (+)
G64889 NA non-coding downstream 262712 18616978 ~ 18618184 (+)
G64910 NA non-coding downstream 319701 18673967 ~ 18674344 (+)
lrrc75ba lrrc75ba,LOC107712478,LOC107753104,LOC107703167,LOC107554425,LOC107687975,LOC105891565,LOC108414797 other upstream 64132 18258220 ~ 18284961 (+)
LOC122350298 pla2g1b,LOC107703141,LOC107753147,LOC107554411,LOC107554412,LOC107550943 other upstream 268524 18071485 ~ 18080569 (+)
LOC122350299 LOC107550944,LOC107687988,LOC107753148,LOC107703140 other upstream 278165 18068716 ~ 18070928 (+)
LOC122350300 LOC107687986,LOC107554413,LOC107703155,LOC101885033,LOC108412050 other upstream 286745 18056972 ~ 18062348 (+)
LOC122350649 si:ch73-138n13.1,LOC107687963,LOC107748143,LOC107553839,LOC107565328,LOC107684508,LOC107753120 other upstream 652687 17683305 ~ 17696406 (+)
sb:cb288 NA other downstream 64682 18418948 ~ 18423805 (+)
adra2b adra2b,LOC107712484,LOC107657329,LOC107554404,LOC107753091,LOC107550971,LOC107703147 other downstream 105785 18460051 ~ 18464547 (+)
gpat2 gpat2,LOC107712449,LOC107550920,LOC107657318 other downstream 211433 18565699 ~ 18600484 (+)
si:ch211-158d24.2 si:ch211-158d24.2,LOC107550960,LOC107703181,LOC107676623,LOC107728434,LOC107571139,LOC107753137 other downstream 341188 18695454 ~ 18722246 (+)
G65100 sf3a1,LOC107564451,LOC107550953 other downstream 740681 19094947 ~ 19096071 (+)

Expression


Co-expression Network