G31452


Basic Information

Item Value
gene id G31452
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 10926284 ~ 10928105 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU35615
CTGCCATTATGAGGATGTAATTGTTACAGCGAGAGCCTCCAAGCAGGAGGTTTAAAAACATTCAGAAATACTGAATACTTCTCACACAAACATGCTATGAAAAGGAAAAAGGCTTAGTAAACCAGACACACGACGGTGTTTAGTGCTGGACCACTACCTTTACCTGGATTCTAGCTGACCTCAGAAAACTTTTGAGGATATCAAATCAATGGCTGATCAAACATGAAAATGGTGTCACTAGTTGCACATATAAAAATAGAACATTTGCCTTTCAGAGGAGCGCAAGCTATCAAGAAGCATACAGTATCCAGTTTCAGTGTAATAAGAAACTATAAGGTCACTTATAGAATCTCAGCGCTGATTAACACTATCTCTAAAGCCGTCTGAGACAAATTCTTCGGGAATCGTGAACCTGTAACAGACGCAGCAAATCTGAAATGGAGAAAAACATACTCGAAGAATTGAAAAGTTACATTATTTACAAATGTGTTGTTGAGGATCTCCTCCTTACCTATAGACATGTAGTGAATTCCCATACGAGTAAGGACTTAAAATTTTGGTCTAAAGGTTTCTGAACTATTGCTGCTCTTAAAAATATGCTTTTTTTAATTAAAAAATTAAGTGCAACAACCTGTCTACGTGCCAGAGTTACATCTATGAGAAAGTGTTGCTAGGCCATGCTGAGCACAAGACAGACATACAACGGTCGATATCGACTTGAACAGCAAACAAATATGCTAGCTCAACCACTGACGCAATTAGCACTCTAAACGGTCTTCTAAGCTACTCGAAAGGAATTTTCAGAGTTGAACGAAGAGCTAGCAGGCAGAGGTAGGCTTTGCGGCTCACTGTGAGCCATAAACACTACCGTCAAACTACGCTTTGTCTGCTTTTTTTCTTTTTCTTTTTCCTTTTAGGAGTGAGACATTCTTTTTAATCCACGGTTGGTTGGTTGGCTGCAGGGTTTCCCTCTTTCGCCCCATTTATGTACATGGCTCTTTCGCCCCTTTTTGCTGGCAGGGTCAGAGAGGCCAGAGGTCAGTTTTTAGAGTCTTAGTGGACGTGATGGATGTATGGACACACACATCACGAGTAAGCAGAGGGAGCAGGAGAGGAAGGTTCGTTCAGTCGTTCACGCATGCTCACACATGCTCGCTCACTGACACACACACACACACACAAAAGCGTGACTCCAAAGCAATCCCAAGCTCTTTACTCCTGCACTGAACTGCTGTGTGTGGTAGTGCTGGCCTTGCCAGCTTTGCGTTCATAGTTCACAAGTCTTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU35615 True 1286 lncRNA 0.30 3 10926284 10928105

Neighbor

gene id symbol gene type direction distance location
CI01000004_10884499_10886045 CBLN2A, CBLN2, CBLN2B coding downstream 40239 10884426 ~ 10886045 (-)
CI01000004_10847650_10847940 NA coding downstream 78289 10847557 ~ 10847995 (-)
CI01000004_10788659_10809214 JPH1B, JPH1 coding downstream 116479 10788659 ~ 10809805 (-)
CI01000004_10766385_10766860 TCEB1B, TCEB1, GM14517, TCEB1A coding downstream 159424 10766340 ~ 10766860 (-)
CI01000004_10757852_10760211 NA coding downstream 165142 10757543 ~ 10761142 (-)
CI01000004_10944147_11018487 CTNND2B, CTNND2 coding upstream 14272 10942377 ~ 11018487 (-)
CI01000004_11043026_11046108 NA coding upstream 114775 11042880 ~ 11046108 (-)
CI01000004_11052319_11059170 RP1 coding upstream 123289 11051394 ~ 11059170 (-)
CI01000004_11073846_11086948 NA coding upstream 145574 11073679 ~ 11086948 (-)
CI01000004_11172493_11174547 MYL12.2, MYL12.1, MLRN, MYL12A, MYL9 coding upstream 244110 11172215 ~ 11175867 (-)
G31454 NA non-coding downstream 4160 10921435 ~ 10922124 (-)
G31456 NA non-coding downstream 6643 10916899 ~ 10919641 (-)
G31455 NA non-coding downstream 12762 10907322 ~ 10913522 (-)
G31271 NA non-coding downstream 24898 10901129 ~ 10901386 (-)
G31265 NA non-coding downstream 36471 10889608 ~ 10889813 (-)
G31457 NA non-coding upstream 2203 10930308 ~ 10930804 (-)
G31466 NA non-coding upstream 6193 10934298 ~ 10934707 (-)
G31484 NA non-coding upstream 134565 11062670 ~ 11067886 (-)
G31486 NA non-coding upstream 141120 11069225 ~ 11069723 (-)
G31542 NA non-coding upstream 260377 11188482 ~ 11188976 (-)
G31203 NA other downstream 175643 10746437 ~ 10750641 (-)
G30316 NA other downstream 1519363 9377937 ~ 9406921 (-)
G29746 NA other downstream 2568157 8354498 ~ 8358127 (-)
G29656 NA other downstream 2960784 7964364 ~ 7965500 (-)
G29388 NA other downstream 4294377 6631293 ~ 6631907 (-)
CI01000004_11407198_11412220 ADCYAP1B, ADCYAP1 other upstream 479360 11406957 ~ 11412907 (-)
G32150 NA other upstream 848414 11776519 ~ 11780951 (-)
G32207 NA other upstream 1448063 12376168 ~ 12384780 (-)
CI01000004_14543631_14551256 NA other upstream 3622695 14541515 ~ 14551352 (-)
G33746 NA other upstream 3640688 14568793 ~ 14569264 (-)

Expression


Co-expression Network