ikbkb (ikbkb,LOC107671012,LOC107722850,LOC107754415)


Basic Information

Item Value
gene id ikbkb
gene name ikbkb,LOC107671012,LOC107722850,LOC107754415
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 1966583 ~ 1995859 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043247683.1
GACCCCGAGGATTTCGTAGATGTGGGGTTTGTATGTGAGAGGTTTGAAGGGCCCGCTATGAGCCGTCCACCCTCCATGCAGCCGCAGATGTGCGGCCCCTGGGAACTGAAGGAGCGACTGGGAACCGGAGGCTTTGGGAATGTCACGCTCTGGCAAAATAAGgaaaGTGCTGATCAGATCGCTATCAAACAATGCCGGCAGGAGCTCAGCGCCAAGAATAAGGGCAGATGGAGTTTAGAGATTCAGATCATGAAGAGGTTGAATCACATGAACGTGGTGGCGGCGAGAGACGTCCCAGAAGAGCTCCAGAAACTGGCCACAAATGACCTGCCATTGCTGGCCATGGAGTACTGCCAGGGAGGAGACCTACGCAAGtatCTGAACCTGCTCGAGAACTGCTGTGGCATGAGAGAAGCTGCTGTACTGACACTGATTCAGGATATATccTCAGCGCTGACGTACCTCCACGGGATGAGGATCATTCACAGAGACCTCAAGCCAGAAAACATCGTCCTTCAACAGGGAGAAAAAAGGTTGGTTCATAAGATCATCGATCTGGGTTACGCTAAAGAGCTGGACCAGAGCAGCCTGTGCACATCGTTTGTCGGGACGCTGCAGTATTTGGCCCCCGAGCTGTTAGAACAGCAGAAGTACACGGTGGCGGTGGATTACTGGAGTTTTGGGACGCTGGTGTTTGAGTGCATCACTGGATTCAGGCCTTTTCTACCAACCTGGCAACCCGTGCAATGGCACAGCAAGCTGCTGCAGAAACAGGTGGATGATATTGTGGTTTACGAGGATCTGATGGGAGAAGTTCGCTTCTCCAAACACCTCCCGAACCCTCACAACCTCAACAAACTGTTAGCTGGTGAACTGGAGAGCTGGCTGCAGATGATGCTGAGATGGTCCCCTAAAGAGCGAGGTAAAGATTTAAGAAAGCGGAGCCAAGACCAAGAGCCGAGAAGTCAGGACGGGGTCAAAGACTCGGAGGAGGACACTAAAGAAAGCAGCTCCGAGGGAAGCAAAGACTCTCCGAAAGCTTCCTGTTTCTGCTTCGATGAGTTGAGCCGCATCCTGAACCTGAAGCTGGTCCGCGTCCTCAACATGAGCTCTGCTGAAATATTCACCTACTCGGTGCAGCCGCGGGAGGACGTGGCAACCCTGCAGGAGCGAATCGCGCGGGACGCCCGCATTCCTCCGGCCAATCAGGAGCTGCTGCTGGAGGCGGGGCTTGCGCTGGAGCCGCACAACAGCGTCATGCAGTGTGCCATCGATTATAGCATGATGGACGCCCGGCGGGCGGATGAGCCGCTGGTCTTCCTGTTTGACCGCTCCTGCTACAGCTACGAGCCTCAGTTCACGCCGCGCGTCCTTCCAGAGAACATCCGATTCGTCCAGAACGAGCCCAAGCGCCTGCTGCCCTACAGCTCCCAGAGACGCACGTGGGGTCAAGCGTGGCACACCATCCGTGCCCTGAAGGAGGACTGGCAGAGACTGCAGCAAGGACAGAAAGTGGCCATcatGAGTCTCCTCAGACACAACGGCACGCTGTCCAAGCAGAAGAACGAGATGATGTCCATGCACCAGAGGTTAAAGGCCACGCTGGAGTTCTTCAGCACCAGCCTGCACATCGACATCGACAAATACCAGGAGCAGAGAACGACGGGCATCGcCTCTGAAAAATTACTGAGTGTCTGGAGAGAAATGGAGCAAACCGCCCTGGACTGTGGGCAGACAGAAGACGTGAATAAGCTGGAGGAGGAGATGATGACCCTTCAGACTGATATCGTGGACCTGCAGAGACAGCCGTGGAGGAGTGGAGAGGCTTTAGAGACGCTCGAGGTGAAGGCCATGGAGCTCTTCCGTAAACTGAGAGAGAAGCCCAGAGAGCAGCGCAGTATGGGCGACTGTCAGGAAGTGATCAAGCTGGTGGTTCAGGCCGTGCAGTTCTACGAGAGGAAGCTGCGGGACTTTTACACGCACCTGAGtaAGACGATGGTGTGCCGTCAGAGAGTTCTGGAGCTGCTGCCGCGTGTGGAGGGGATGGTGAGTGCGATGGCCCGCAGCGAGAAACAACTGCTGCACCTGCAggagaagagacagaaggagCTGTGGAACCTGCTCAAAGTGGCCTGTAGTAAGGTTCGTAGTCCAGTGAGCGGCAGTCCAGATGGAGGACGAACTCCACCGGCCCCTGCACACCCGCTCATGTCCCACAGACCGTCGGACGCACCGCAGCCagacGAGTCTCAGCTTGTGATTGAGCAGAGCAAGATGTTTGAGAACCGCATGCAGAGTTTAGTGCAGAACGCCATTCAGGAAACAGAGACCAGCTTGCAGATGCTGAGAGAGTGGAAGTGGTTGAACGGAGGACAGGATTTGGCTTGATCCCGAAGATCCGCGTTTGTCAGGAAATCAAGACTGTTGGCGGAAACGTGAACAAACATGATGCTATACCGCCACCAACTGGAGGAAACGCGATACTGCAGGCAGTGTGTGCCGACGTTCCTGTGAAACCACACTCGAGTCGTTTTATAAATTCGTGTCTGACTTTTAAGAGGTATAAACCCTTAAAtatagcttttaaaatgtttcatcagAATACTTGAccattttcagcttttatgatgctttttcgCCATTTGTGCGCATGTACTTCTGCAGCCTAAGCGTtgttgtaagtcgctttggataaaaacacGCGCTTAttgaattaatgaaaatataaatcagtCCTAGCTCATTACCTGGCTGTGACTAGACGGTAGGTGTCATCGTATAAATGTGGCCATTTCTTATCGTTTTCATCCTTTATGATGCTATGAAGATTTTATGACAcaaagtaacacacacacacacacaggaacttATGAAATATGTAAAGTACCGTTTCATTaagagaaattatttttatatgctgaCAAAAATAGCATCTTTTCTCTGGTACACAGAAAGGTTTTTTTAacggtttttaaataaaaattaaaatgtatccaAA
>XM_043247684.1
CTTACGGTAAAAAAGTTCAGGAAGTAGAGAAACTCAACTCTCTTCTGCTTTCAAAACACTCtcacaaaacatacatttactgaaaaaatccGCGTGTGTGTAGAGATCGCGGCAGTAATCTGTCCTGAGGCGGGGAAAGGTGTTTTGCAGACTGCGTTTTCGTGTAGATCAGATCAAATCTGAAAGGGGTTTGTATGTGAGAGGTTTGAAGGGCCCGCTATGAGCCGTCCACCCTCCATGCAGCCGCAGATGTGCGGCCCCTGGGAACTGAAGGAGCGACTGGGAACCGGAGGCTTTGGGAATGTCACGCTCTGGCAAAATAAGgaaaGTGCTGATCAGATCGCTATCAAACAATGCCGGCAGGAGCTCAGCGCCAAGAATAAGGGCAGATGGAGTTTAGAGATTCAGATCATGAAGAGGTTGAATCACATGAACGTGGTGGCGGCGAGAGACGTCCCAGAAGAGCTCCAGAAACTGGCCACAAATGACCTGCCATTGCTGGCCATGGAGTACTGCCAGGGAGGAGACCTACGCAAGtatCTGAACCTGCTCGAGAACTGCTGTGGCATGAGAGAAGCTGCTGTACTGACACTGATTCAGGATATATccTCAGCGCTGACGTACCTCCACGGGATGAGGATCATTCACAGAGACCTCAAGCCAGAAAACATCGTCCTTCAACAGGGAGAAAAAAGGTTGGTTCATAAGATCATCGATCTGGGTTACGCTAAAGAGCTGGACCAGAGCAGCCTGTGCACATCGTTTGTCGGGACGCTGCAGTATTTGGCCCCCGAGCTGTTAGAACAGCAGAAGTACACGGTGGCGGTGGATTACTGGAGTTTTGGGACGCTGGTGTTTGAGTGCATCACTGGATTCAGGCCTTTTCTACCAACCTGGCAACCCGTGCAATGGCACAGCAAGCTGCTGCAGAAACAGGTGGATGATATTGTGGTTTACGAGGATCTGATGGGAGAAGTTCGCTTCTCCAAACACCTCCCGAACCCTCACAACCTCAACAAACTGTTAGCTGGTGAACTGGAGAGCTGGCTGCAGATGATGCTGAGATGGTCCCCTAAAGAGCGAGGTAAAGATTTAAGAAAGCGGAGCCAAGACCAAGAGCCGAGAAGTCAGGACGGGGTCAAAGACTCGGAGGAGGACACTAAAGAAAGCAGCTCCGAGGGAAGCAAAGACTCTCCGAAAGCTTCCTGTTTCTGCTTCGATGAGTTGAGCCGCATCCTGAACCTGAAGCTGGTCCGCGTCCTCAACATGAGCTCTGCTGAAATATTCACCTACTCGGTGCAGCCGCGGGAGGACGTGGCAACCCTGCAGGAGCGAATCGCGCGGGACGCCCGCATTCCTCCGGCCAATCAGGAGCTGCTGCTGGAGGCGGGGCTTGCGCTGGAGCCGCACAACAGCGTCATGCAGTGTGCCATCGATTATAGCATGATGGACGCCCGGCGGGCGGATGAGCCGCTGGTCTTCCTGTTTGACCGCTCCTGCTACAGCTACGAGCCTCAGTTCACGCCGCGCGTCCTTCCAGAGAACATCCGATTCGTCCAGAACGAGCCCAAGCGCCTGCTGCCCTACAGCTCCCAGAGACGCACGTGGGGTCAAGCGTGGCACACCATCCGTGCCCTGAAGGAGGACTGGCAGAGACTGCAGCAAGGACAGAAAGTGGCCATcatGAGTCTCCTCAGACACAACGGCACGCTGTCCAAGCAGAAGAACGAGATGATGTCCATGCACCAGAGGTTAAAGGCCACGCTGGAGTTCTTCAGCACCAGCCTGCACATCGACATCGACAAATACCAGGAGCAGAGAACGACGGGCATCGcCTCTGAAAAATTACTGAGTGTCTGGAGAGAAATGGAGCAAACCGCCCTGGACTGTGGGCAGACAGAAGACGTGAATAAGCTGGAGGAGGAGATGATGACCCTTCAGACTGATATCGTGGACCTGCAGAGACAGCCGTGGAGGAGTGGAGAGGCTTTAGAGACGCTCGAGGTGAAGGCCATGGAGCTCTTCCGTAAACTGAGAGAGAAGCCCAGAGAGCAGCGCAGTATGGGCGACTGTCAGGAAGTGATCAAGCTGGTGGTTCAGGCCGTGCAGTTCTACGAGAGGAAGCTGCGGGACTTTTACACGCACCTGAGtaAGACGATGGTGTGCCGTCAGAGAGTTCTGGAGCTGCTGCCGCGTGTGGAGGGGATGGTGAGTGCGATGGCCCGCAGCGAGAAACAACTGCTGCACCTGCAggagaagagacagaaggagCTGTGGAACCTGCTCAAAGTGGCCTGTAGTAAGGTTCGTAGTCCAGTGAGCGGCAGTCCAGATGGAGGACGAACTCCACCGGCCCCTGCACACCCGCTCATGTCCCACAGACCGTCGGACGCACCGCAGCCagacGAGTCTCAGCTTGTGATTGAGCAGAGCAAGATGTTTGAGAACCGCATGCAGAGTTTAGTGCAGAACGCCATTCAGGAAACAGAGACCAGCTTGCAGATGCTGAGAGAGTGGAAGTGGTTGAACGGAGGACAGGATTTGGCTTGATCCCGAAGATCCGCGTTTGTCAGGAAATCAAGACTGTTGGCGGAAACGTGAACAAACATGATGCTATACCGCCACCAACTGGAGGAAACGCGATACTGCAGGCAGTGTGTGCCGACGTTCCTGTGAAACCACACTCGAGTCGTTTTATAAATTCGTGTCTGACTTTTAAGAGGTATAAACCCTTAAAtatagcttttaaaatgtttcatcagAATACTTGAccattttcagcttttatgatgctttttcgCCATTTGTGCGCATGTACTTCTGCAGCCTAAGCGTtgttgtaagtcgctttggataaaaacacGCGCTTAttgaattaatgaaaatataaatcagtCCTAGCTCATTACCTGGCTGTGACTAGACGGTAGGTGTCATCGTATAAATGTGGCCATTTCTTATCGTTTTCATCCTTTATGATGCTATGAAGATTTTATGACAcaaagtaacacacacacacacacaggaacttATGAAATATGTAAAGTACCGTTTCATTaagagaaattatttttatatgctgaCAAAAATAGCATCTTTTCTCTGGTACACAGAAAGGTTTTTTTAacggtttttaaataaaaattaaaatgtatccaAA

Function

symbol description
ikbkb Enables kinase activity. Acts upstream of or within regulation of cytokinesis and skin development. Predicted to be located in nucleus. Predicted to be part of IkappaB kinase complex. Predicted to be active in cytoplasm. Human ortholog(s) of this gene implicated in breast cancer; combined immunodeficiency (multiple); dermatitis; prostate cancer (multiple); and type 2 diabetes mellitus. Orthologous to human IKBKB (inhibitor of nuclear factor kappa B kinase subunit beta).

NR:

description
PREDICTED: inhibitor of nuclear factor kappa-B kinase subunit beta

GO:

id name namespace
GO:0006468 protein phosphorylation biological_process
GO:0005524 ATP binding molecular_function
GO:0004674 protein serine/threonine kinase activity molecular_function

KEGG:

id description
K07209 IKBKB, IKKB; inhibitor of nuclear factor kappa-B kinase subunit beta

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043247683.1 False 2998 mRNA 0.52 22 1966583 1995859
XM_043247684.1 True 3160 mRNA 0.51 22 1967657 1995859

Neighbor

gene id symbol gene type direction distance location
LOC122350512 NA coding upstream 19634 1936761 ~ 1946949 (+)
snap29 snap29,LOC107722859,LOC107560055,LOC107726963 coding upstream 139172 1822636 ~ 1827411 (+)
serpind1 serpind1,LOC107671000,LOC107738496,LOC107559590,LOC107722856,LOC107698014,LOC107560052 coding upstream 159181 1802695 ~ 1807402 (+)
LOC122350660 NA coding upstream 316965 1648478 ~ 1649618 (+)
LOC122351062 NA coding upstream 406216 1559120 ~ 1560367 (+)
enkd1 si:ch211-220d9.3,enkd1,LOC107754420,LOC107699630,LOC107657207,LOC107670972 coding downstream 10225 2006084 ~ 2014684 (+)
mrpl40 LOC107753002,LOC107559600,LOC107699643,LOC107560058,LOC107754402,LOC107671004 coding downstream 59472 2055331 ~ 2058725 (+)
gle1 gle1,LOC107671035,LOC107699671,LOC107754403 coding downstream 65682 2061541 ~ 2069288 (+)
si:ch211-51h9.7 NA coding downstream 73959 2069818 ~ 2071669 (+)
naif1 naif1,LOC107559603,LOC107753004 coding downstream 100300 2096159 ~ 2103906 (+)
G60269 NA non-coding upstream 13457 1952793 ~ 1953126 (+)
G60265 NA non-coding upstream 16287 1947148 ~ 1950296 (+)
G60258 NA non-coding upstream 55416 1908528 ~ 1911167 (+)
G60248 NA non-coding upstream 80144 1885248 ~ 1886439 (+)
G59974 NA non-coding upstream 140747 1755120 ~ 1825836 (+)
G60288 NA non-coding downstream 4902 2000761 ~ 2003003 (+)
LOC122350140 NA non-coding downstream 28703 2024562 ~ 2027328 (+)
G60279 rpl6 non-coding downstream 45643 2041502 ~ 2113333 (+)
G60296 NA non-coding downstream 157612 2153471 ~ 2156394 (+)
G60297 LOC107568007,LOC107754426,LOC107670998,LOC107699638,LOC107560048 non-coding downstream 163455 2159314 ~ 2162044 (+)
G60259 LOC107560031,LOC107559593,LOC108412499,LOC107754396 other upstream 48212 1915460 ~ 1918371 (+)
pggt1b pggt1b other upstream 747779 1210815 ~ 1218804 (+)
znf608 znf608,LOC107574328,LOC107697597,LOC107712568,LOC107704598,LOC107573349,LOC107726216 other upstream 1114579 842077 ~ 852004 (+)
G59807 NA other upstream 1161744 803653 ~ 804839 (+)
cdc14b cdc14b,LOC107661524,LOC107704583,LOC107568104,LOC107726879,LOC107570987 other upstream 1415896 537775 ~ 550687 (+)
polb polb,LOC107670984,LOC107722860 other downstream 19000 2014859 ~ 2020034 (+)
LOC122350053 NA other downstream 34965 2030824 ~ 2035980 (+)
LOC122350758 dynll1,dynll2a,LOC103397138,LOC100698873,LOC107559583 other downstream 41840 2037699 ~ 2039836 (+)
G60788 lhfpl4b,LOC107584928,LOC107674308,LOC107743140,LOC107727430,LOC107701811,LOC103032126,LOC105898894 other downstream 1852755 3848614 ~ 3850557 (+)
LOC122350109 LOC107743114,LOC107552217,LOC107674346 other downstream 1929002 3924861 ~ 3931488 (+)

Expression


Co-expression Network