glt1d1 (glt1d1,LOC107676618,LOC107659266)


Basic Information

Item Value
gene id glt1d1
gene name glt1d1,LOC107676618,LOC107659266
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 18996469 ~ 19023292 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043247730.1
cgcgcgcgtgtgtgtgtgtgtgtccgggTCCGGGAGGCTGGTCTCTGACGCGGCAGCATGAGATTACAGAGTCAGGTCAAGAGAGTATCTTTGTCCGTCTGCTGGCAGGCGAGGGATCATTGTTTATTAGCGTCAGCGTTTTATCGCCACGCGCTGACATGCGCGTGCTCTTTTTAGCCCCAAACAGTCCCAAAACAGGGAACCGTACCACTGCCGAAAGAATAAGgaaTCATATCGTGGCTGCAGGACACACTTGTGTACTGTGTGATACGAGAGAGTTGGGCTCAGCCTCTGATGTATCGTCCCTGATGACGCAAGAGCCGCGGTTCGAAGCTGCTCTGGCCATTCATCTTTTCAAAGGAGGCAGGCTTCTTTTAGATGCTGGAGTGCCGTTCGGGGTGGTGTTTGGAGGGACGGACGTCAACGAGGACGTCAAAGATGAGCACAAGCGAGCTGTCATGAAGGAAGTCCTGCGCAAGGCCAGGTTTGCTGTGGCGTTCACCGATAAACTGAAAGAACGTGCCGAGGAGCTCTTGGTATGTGAGAGCAAGAAGATCTATGTACAGCCTCAAGGGATTGAGACCAGAGTGGCGTCACATTTCAGCTGGAGTGACTTTTTACACAACACAGGTGTGCATACCAAGCAAGTAGAAAATCTGCGTGTGTTTCTGCTGGTATGTGGACTCAGACGAGTTAAGGATCCTCTGTATCTGCTAGAAGCTTTTGCAGAATGGCACAGACAGAACCCCCTAGTGGTCCTTATCATCATTGGTCCAAAGATAGATCCAGTGTTTACAGCTGAGGTTGAGGAGAGTGTCAAGAGaggtgTTGGAGTGTATCTGGCGGCTGATTTGAGTCAGGAGGAGCTGCATGCTGTCATGCAGAAATCATTTGCCCTGGTCAACTCGTCTCTCTCCGAGGGAATGTCCGCTGCCATCCTAGAGGCGATGGATTTAGGTTTGCCTGTTTTAGCGAGGGATGTTCCTGGAAATGCTGCCATAGTCGAGCATGAGGTCACAGGACTGCTGTACTCGAGCCCTCAGGAATTTGTACGCTTGTCCAGAAAGCTGCTGGATGACCATGAGCTCCAGCAAAGACTGGTGAGGAACGCAAAGAATTACATTATAACATGCCACAACCCAATGAAGGAGAGAATAACCTATCAGAAAGCGGTGGAGACTCTTCACTGACAGTACGATGAGATCCTCATTTCTCTCAGGTCTTTAAGAACTTGAAAAAAAGTTGAGGGCTTTGTGCTCTTTCTAGAGCTTTTAAAACTGAACTGCATATTTCGGTTGGATACGCAAGCCTCTCCCACGACTGCCAAGATAATGGTGGCCATTTGTCACTAAAGTAGGATaaacagtaaagatatttttatagGATGTTGACTTCTTAAGTTTCACCAGGTATGAAAGGGACACACATTTTGCTATACATTTACTAAGTACTTCAATGACTATTTATCAGGTCTTAACAAGGATGTGCTGTGTGCTGCATGTTTGCAAGTGTTCGTGTTGTGCTTTCGTTGTGTCGTGGTGTTTGATTGACGATTGGGTATAGAAGAGCCAGTGTTACCACCGTTGGTTGTGAGTTTTCTGAGTTAACATTATAATGCAAGCTAGAAAGGTTTCTGCTCTTAGGAGGATTTCAGCTTGAACTGAACAGacagcttgtgtttgtgtgcatgtgtgataCGACGTGGCAGGCAAGATATATACGATAAAGTAAAAAAGGCTGAAATGCACCGTACtgatttttcaaaacaaacgtAAGACATGGGGTGCAGGAATGCCAGTTTGAGAGGTGCTACATTTggcttgtttgtttaataatagtCAAAATTGGAGCTTAAAAGTGTTTCAACCGTAGCAAGGCCAAAATTTTCAGGCTTAATAAACTCATAAGCCGATTCAGCTTCCAAGCTGTTTTTTCCCTAAAGTCCAGAAGGAGAACAGTTATGTTCTCTGTAcgataaatgaaacaaaatattgtttttaaggaaacattttattcttctgaggatttttaatttattcatgaaaGTTACTGTTCAGGGATTAAGGTTTGTATTTAGAGATTTTGCtaaacatattataaaatatttattctgtttgtAATTAAGACTGTATGTCTCATTTCAGACCATGACTTTGCATAATTGTATCTACTTTTCTTtgaatttcaataaaatatagtGTTTGCCTGACGAAGGTCTTTGGCCGAAATGttgctacttttaaaaaaaaatgtgaataaaggGAATATAACGGTG

Function

symbol description
glt1d1 Orthologous to human GLT1D1 (glycosyltransferase 1 domain containing 1).

NR:

description
glycosyltransferase 1 domain-containing protein 1 isoform X4

GO:

id name namespace
GO:0009058 biosynthetic process biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043247730.1 True 2275 mRNA 0.44 12 18996469 19023292

Neighbor

gene id symbol gene type direction distance location
si:dkeyp-14d3.1 si:dkeyp-14d3.1,LOC107676622,LOC107728438,LOC107659267,LOC107550917,LOC107753136 coding upstream 54792 18761647 ~ 18941677 (+)
si:ch211-158d24.4 NA coding upstream 267333 18725783 ~ 18729136 (+)
arpc5la arpc5la,LOC107571143,LOC107728439,LOC107550963,LOC107676626,LOC107753090,LOC108411248 coding upstream 317643 18675319 ~ 18678826 (+)
LOC122350979 LOC107728433,LOC107676613 coding upstream 324240 18663946 ~ 18672229 (+)
olfml2a olfml2a,LOC107657324,LOC107550966,LOC107554414,LOC107703179 coding upstream 344915 18634296 ~ 18651554 (+)
LOC122351071 slc7a4 coding downstream 58305 19081597 ~ 19090260 (+)
LOC122350065 pold2,LOC107747204 coding downstream 77014 19100306 ~ 19103847 (+)
LOC122350746 pqbp1,LOC107702814,LOC107683912,LOC107747222 coding downstream 81761 19105053 ~ 19106870 (+)
LOC122349950 adra2b,LOC107712484,LOC107657329,LOC107554404,LOC107550971,LOC107753091,LOC107703147 coding downstream 173158 19196450 ~ 19200081 (+)
slc7a4 slc7a4,LOC106579925 coding downstream 226429 19249721 ~ 19256112 (+)
G64910 NA non-coding upstream 322125 18673967 ~ 18674344 (+)
G64889 NA non-coding upstream 378285 18616978 ~ 18618184 (+)
G64878 NA non-coding upstream 545105 18451042 ~ 18451364 (+)
G64862 NA non-coding upstream 605258 18390674 ~ 18391211 (+)
G64858 NA non-coding upstream 629359 18366570 ~ 18367110 (+)
G65094 NA non-coding downstream 25990 19049282 ~ 19212125 (+)
G65108 NA non-coding downstream 160398 19183690 ~ 19347044 (+)
G65074 NA non-coding downstream 201277 19224569 ~ 19233384 (+)
G65119 NA non-coding downstream 382364 19405656 ~ 19482043 (+)
G65111 NA non-coding downstream 400727 19424019 ~ 19425722 (+)
si:ch211-158d24.2 si:ch211-158d24.2,LOC107550960,LOC107703181,LOC107676623,LOC107728434,LOC107571139,LOC107753137 other upstream 274223 18695454 ~ 18722246 (+)
gpat2 gpat2,LOC107712449,LOC107550920,LOC107657318 other upstream 395985 18565699 ~ 18600484 (+)
adra2b adra2b,LOC107712484,LOC107657329,LOC107554404,LOC107753091,LOC107550971,LOC107703147 other upstream 531922 18460051 ~ 18464547 (+)
sb:cb288 NA other upstream 572664 18418948 ~ 18423805 (+)
lrrc75ba lrrc75ba,LOC107712478,LOC107753104,LOC107703167,LOC107554425,LOC107687975,LOC105891565,LOC108414797 other upstream 711508 18258220 ~ 18284961 (+)
G65100 sf3a1,LOC107564451,LOC107550953 other downstream 71655 19094947 ~ 19096071 (+)
G65105 LOC107747205,LOC107550912,LOC107683889,LOC108412149 other downstream 96652 19119944 ~ 19152305 (+)
LOC122350733 LOC107702875,LOC107722994,LOC107591954,LOC107573969,LOC107722996,LOC107691581 other downstream 176696 19199988 ~ 19201687 (+)
pqbp1 pqbp1,LOC107702814,LOC107683912,LOC107747222 other downstream 248800 19272092 ~ 19273770 (+)
rfk rfk,LOC107740987,LOC107723557 other downstream 1006742 20030034 ~ 20033607 (+)

Expression


Co-expression Network