ptpn18 (LOC107743092,LOC107653414,LOC107601761,LOC107734536,LOC107674370,LOC107584895)


Basic Information

Item Value
gene id ptpn18
gene name LOC107743092,LOC107653414,LOC107601761,LOC107734536,LOC107674370,LOC107584895
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 4674326 ~ 4689480 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043247744.1
CATAAGCGGGAGAAACTTCCCTGTGTCAGTTTCGCTGCCTGGATAACTGTACCAAGACGGGTGTATTACTAGTTAAGATTGTACAAGGAGTAGAGCAACAAAAAATGAAGGAGTAAGATGCTGGAGAGAGTGATTATAGAGTGATGGAAGCGCACCTGTTGAGGTTCGTGGAGCGGGTTCGTTGTCTGTCCGACAATGACAGCAGTGCAGACCAGTTCATCTCCACAGAGTTCAACCTGATCCGACAGAAAAGCGCAACCCTGAAAGAAGATTATGGCCTGACCACTGCGGTAGGAGAAATCAAAGAAAATGCGAAGAAAAACCGATATAGGGATATTCTGCCCTATGATCAGACCAGAGTCTGTCTAGCTCCAACCACATCTGAATGTGAGTCTGATTATATTAACGGCAGCTTCATCAAGGGAGCAGTTAAGAACCGGATGTATATCGCTACCCAGGGCCCTTTGAGCACGACTGTGGTTGATTTCTGGCGTATGATTTGGCAACACAATGTTAAGGTCATAATCATGGCTTGCAGAGAGATTGAGATGGGAAAGaaaaaatgtgAAGTCTACTGGGAACTGTCTACTGGTCCCTTTGCCGTCTCAACTtttaaggAGTCACGGCCGAATGAGGAAGTCATTGTTCGGACACTGTCGGTAAAATATTGTGATGAAACCCGTAAAGTGCATCACTTCCAGTATACTGCCTGGCCGGACCACGGAATTCCAGACATGCCGGATGGCATTCTGGGTATGATGGAGTTGGCTCGCCAAAAACAGGGCAACCAGACGGACCCTGTAGTGATCCACTGCAGTGCTGGCTGCGGTAGAACGGGGGTCATCTGTGCTGTTGACTATGTCAATGATCTACTGCTGACGGAGcgAATACAGGAggattttaacatatttgacCTGGTGTTAGAGCTAAGGAGACAGAGAACTTCGGTGGTGCAGACCAAGGAGCAGTATGCGTTTGTCTTTCATACGGTTGCTCAGATGTTTCAGAAGGTCTTGGAGATGAAAAACAAGAATACGGAGACTTCAGCCTCTCTGTACGTCAATGCGGTTCCACCGAAGACTTCGCTGAAATCAGGATCATTAGGCAGCATCAGCGCACCGCTCAAAACACGAAATCCGCCTCTCAAGTCTAGGCTTTctcatcctcttcctcagaTCAGGATGAATGACACTTACGCGGTCATCAACAAGTCCAAACTACAGCCTCCTGCTTCTGCCTCTCGTTCCATCACTGTCCATCACTATGACAATGCAGATTTAGAGAGAAGCAAGAACAATGCTGTCTACAGTACAGTCAAACCTAAAAACAGGCCCGTGTCAGTCCTGCCCTCTCCCACCTCGCCGGGTAACGACATATCAacgacagccaatcagagaggaCTCCCACTGAAAAAGACGGATCTATTGTCAggggAGTTGAGGTCCATGAATCGAGATTCAGAGCCACACAGCTCTCTTTCACGATCCCAAAGTGCAACTGAGAGCCTATCTTCTACAGATGATGATTATGAATATGTGTCTAGTGTCGTCAAGGACACCAGCAGTCCATTTTCCCCGGGCGGCCTGGGTTTCAACTGCCGCATAAAGAAACCCAAAGGCCCTCGAGATCCACCGGCTGAATGGAGTCGCGCAGAAAGATGAAACCGCTGAAGGTTTtaggttttatataaaaataactcgGTGTAGCCTGTTTCAGTACTTTACACTGGGTAATAAgcactatttattttctttactggGATTGCTGTTTTAAATACTGAGGAAATGCATGTACAGTAGTGGAGTTTATTGGTGTATTTGTGGCAAAGCAGACCTTGCAAGTGCTATAGGAACTTTTCAGCGCACGCTGATGCAAGAATGCATGCGatttttgtaatcattttagTCGACTtacgttatttttttatatgccgATCTCTCCTAATGTTGTTTACAGTGTAAATGTGAATCATGATCTGTTCTAATGTATTCATCTGACACCGGTAAGTTGCAGTTTAGTTTCAGTACgtgtttattttgtacttattttggtttttatatcacattaaaacattttacgtCAAACCGAA
>XM_043247745.1
ATCATAAGCGGGAGAAACTTCCCTGTGTCAGTTTCGCTGCCTGGATAACTGTACCAAGACGGGTGTATTACTAGTTAAGATTGTACAAGGAGTAGAGCAACAAAAAATGAAGGAGTAAGATGCTGGAGAGAGTGATTATAGAGTGATGGAAGCGCACCTGTTGAGGTTCGTGGAGCGGGTTCGTTGTCTGTCCGACAATGACAGCAGTGCAGACCAGTTCATCTCCACAGAGTTCAACCTGATCCGACAGAAAAGCGCAACCCTGAAAGAAGATTATGGCCTGACCACTGCGGTAGGAGAAATCAAAGAAAATGCGAAGAAAAACCGATATAGGGATATTCTGCCCTATGATCAGACCAGAGTCTGTCTAGCTCCAACCACATCTGAATGTGAGTCTGATTATATTAACGGCAGCTTCATCAAGGGAGCAGTTAAGAACCGGATGTATATCGCTACCCAGGGCCCTTTGAGCACGACTGTGGTTGATTTCTGGCGTATGATTTGGCAACACAATGTTAAGGTCATAATCATGGCTTGCAGAGAGATTGAGATGGGAAAGaaaaaatgtgAAGTCTACTGGGAACTGTCTACTGGTCCCTTTGCCGTCTCAACTtttaaggAGTCACGGCCGAATGAGGAAGTCATTGTTCGGACACTGTCGGTAAAATATTGTGATGAAACCCGTAAAGTGCATCACTTCCAGTATACTGCCTGGCCGGACCACGGAATTCCAGACATGCCGGATGGCATTCTGGGTATGATGGAGTTGGCTCGCCAAAAACAGGGCAACCAGACGGACCCTGTAGTGATCCACTGCAGTGCTGGCTGCGGTAGAACGGGGGTCATCTGTGCTGTTGACTATGTCAATGATCTACTGCTGACGGAGcgAATACAGGAggattttaacatatttgacCTGGTGTTAGAGCTAAGGAGACAGAGAACTTCGGTGGTGCAGACCAAGGAGCAGTATGCGTTTGTCTTTCATACGGTTGCTCAGATGTTTCAGAAGGTCTTGGAGATGAAAAACAAGAATACGGAGACTTCAGCCTCTCTGTACGTCAATGCGGTTCCACCGAAGACTTCGCTGAAATCAGGATCATTAGGCAGCATCAGCGCACCGCTCAAAACACGAAATCCGCCTCTCAAGTCTAGGCTTTctcatcctcttcctcagaTCAGGATGAATGACACTTACGCGGTCATCAACAAGTCCAAACTACAGCCTCCTGCTTCTGCCTCTCGTTCCATCACTGTCCATCACTATGACAATGCAGATTTAGAGAGAAGCAAGAACAATGCTGTCTACAGTACAGTCAAACCTAAAAACAGGCCCGTGTCAGTCCTGCCCTCTCCCACCTCGCCGGGTAACGACATATCAacgacagccaatcagagaggaCTCCCACTGAAAAAGACGGATCTATTGTCAggggAGTTGAGGTCCATGAATCGAGATTCAGAGCTGAGAGCCTATCTTCTACAGATGATGATTATGAATATGTGTCTAGTGTCGTCAAGGACACCAGCAGTCCATTTTCCCCGGGCGGCCTGGGTTTCAACTGCCGCATAAAGAAACCCAAAGGCCCTCGAGATCCACCGGCTGAATGGAGTCGCGCAGAAAGATGAAACCGCTGAAGGTTTtaggttttatataaaaataactcgGTGTAGCCTGTTTCAGTACTTTACACTGGGTAATAAgcactatttattttctttactggGATTGCTGTTTTAAATACTGAGGAAATGCATGTACAGTAGTGGAGTTTATTGGTGTATTTGTGGCAAAGCAGACCTTGCAAGTGCTATAGGAACTTTTCAGCGCACGCTGATGCAAGAATGCATGCGatttttgtaatcattttagTCGACTtacgttatttttttatatgccgATCTCTCCTAATGTTGTTTACAGTGTAAATGTGAATCATGATCTGTTCTAATGTATTCATCTGACACCGGTAAGTTGCAGTTTAGTTTCAGTACgtgtttattttgtacttattttggtttttatatcacattaaaacattttacgtCAAACCGAA
>XM_043247746.1
CTGATCCGACAGAAAAGCGCAACCCTGAAAGAAGATTATGGCCTGACCACTGCGGTAGGAGAAATCAAAGAAAATGCGAAGAAAAACCGATATAGGGATATTCTGCCCTctttttatgTATTCCAGATGATCAGACCAGAGTCTGTCTAGCTCCAACCACATCTGAATGTGAGTCTGATTATATTAACGGCAGCTTCATCAAGGGAGCAGTTAAGAACCGGATGTATATCGCTACCCAGGGCCCTTTGAGCACGACTGTGGTTGATTTCTGGCGTATGATTTGGCAACACAATGTTAAGGTCATAATCATGGCTTGCAGAGAGATTGAGATGGGAAAGaaaaaatgtgAAGTCTACTGGGAACTGTCTACTGGTCCCTTTGCCGTCTCAACTtttaaggAGTCACGGCCGAATGAGGAAGTCATTGTTCGGACACTGTCGGTAAAATATTGTGATGAAACCCGTAAAGTGCATCACTTCCAGTATACTGCCTGGCCGGACCACGGAATTCCAGACATGCCGGATGGCATTCTGGGTATGATGGAGTTGGCTCGCCAAAAACAGGGCAACCAGACGGACCCTGTAGTGATCCACTGCAGTGCTGGCTGCGGTAGAACGGGGGTCATCTGTGCTGTTGACTATGTCAATGATCTACTGCTGACGGAGcgAATACAGGAggattttaacatatttgacCTGGTGTTAGAGCTAAGGAGACAGAGAACTTCGGTGGTGCAGACCAAGGAGCAGTATGCGTTTGTCTTTCATACGGTTGCTCAGATGTTTCAGAAGGTCTTGGAGATGAAAAACAAGAATACGGAGACTTCAGCCTCTCTGTACGTCAATGCGGTTCCACCGAAGACTTCGCTGAAATCAGGATCATTAGGCAGCATCAGCGCACCGCTCAAAACACGAAATCCGCCTCTCAAGTCTAGGCTTTctcatcctcttcctcagaTCAGGATGAATGACACTTACGCGGTCATCAACAAGTCCAAACTACAGCCTCCTGCTTCTGCCTCTCGTTCCATCACTGTCCATCACTATGACAATGCAGATTTAGAGAGAAGCAAGAACAATGCTGTCTACAGTACAGTCAAACCTAAAAACAGGCCCGTGTCAGTCCTGCCCTCTCCCACCTCGCCGGGTAACGACATATCAacgacagccaatcagagaggaCTCCCACTGAAAAAGACGGATCTATTGTCAggggAGTTGAGGTCCATGAATCGAGATTCAGAGCCACACAGCTCTCTTTCACGATCCCAAAGTGCAACTGAGAGCCTATCTTCTACAGATGATGATTATGAATATGTGTCTAGTGTCGTCAAGGACACCAGCAGTCCATTTTCCCCGGGCGGCCTGGGTTTCAACTGCCGCATAAAGAAACCCAAAGGCCCTCGAGATCCACCGGCTGAATGGAGTCGCGCAGAAAGATGAAACCGCTGAAGGTTTtaggttttatataaaaataactcgGTGTAGCCTGTTTCAGTACTTTACACTGGGTAATAAgcactatttattttctttactggGATTGCTGTTTTAAATACTGAGGAAATGCATGTACAGTAGTGGAGTTTATTGGTGTATTTGTGGCAAAGCAGACCTTGCAAGTGCTATAGGAACTTTTCAGCGCACGCTGATGCAAGAATGCATGCGatttttgtaatcattttagTCGACTtacgttatttttttatatgccgATCTCTCCTAATGTTGTTTACAGTGTAAATGTGAATCATGATCTGTTCTAATGTATTCATCTGACACCGGTAAGTTGCAGTTTAGTTTCAGTACgtgtttattttgtacttattttggtttttatatcacattaaaacattttacgtCAAACCGAA
>XM_043247747.1
TAGAGTGATGGAAGCGCACCTGTTGAGGTTCGTGGAGCGGGTTCGTTGTCTGTCCGACAATGACAGCAGTGCAGACCAGTTCATCTCCACAGAGTTCAACATGATCAGACCAGAGTCTGTCTAGCTCCAACCACATCTGAATGTGAGTCTGATTATATTAACGGCAGCTTCATCAAGGGAGCAGTTAAGAACCGGATGTATATCGCTACCCAGGGCCCTTTGAGCACGACTGTGGTTGATTTCTGGCGTATGATTTGGCAACACAATGTTAAGGTCATAATCATGGCTTGCAGAGAGATTGAGATGGGAAAGaaaaaatgtgAAGTCTACTGGGAACTGTCTACTGGTCCCTTTGCCGTCTCAACTtttaaggAGTCACGGCCGAATGAGGAAGTCATTGTTCGGACACTGTCGGTAAAATATTGTGATGAAACCCGTAAAGTGCATCACTTCCAGTATACTGCCTGGCCGGACCACGGAATTCCAGACATGCCGGATGGCATTCTGGGTATGATGGAGTTGGCTCGCCAAAAACAGGGCAACCAGACGGACCCTGTAGTGATCCACTGCAGTGCTGGCTGCGGTAGAACGGGGGTCATCTGTGCTGTTGACTATGTCAATGATCTACTGCTGACGGAGcgAATACAGGAggattttaacatatttgacCTGGTGTTAGAGCTAAGGAGACAGAGAACTTCGGTGGTGCAGACCAAGGAGCAGTATGCGTTTGTCTTTCATACGGTTGCTCAGATGTTTCAGAAGGTCTTGGAGATGAAAAACAAGAATACGGAGACTTCAGCCTCTCTGTACGTCAATGCGGTTCCACCGAAGACTTCGCTGAAATCAGGATCATTAGGCAGCATCAGCGCACCGCTCAAAACACGAAATCCGCCTCTCAAGTCTAGGCTTTctcatcctcttcctcagaTCAGGATGAATGACACTTACGCGGTCATCAACAAGTCCAAACTACAGCCTCCTGCTTCTGCCTCTCGTTCCATCACTGTCCATCACTATGACAATGCAGATTTAGAGAGAAGCAAGAACAATGCTGTCTACAGTACAGTCAAACCTAAAAACAGGCCCGTGTCAGTCCTGCCCTCTCCCACCTCGCCGGGTAACGACATATCAacgacagccaatcagagaggaCTCCCACTGAAAAAGACGGATCTATTGTCAggggAGTTGAGGTCCATGAATCGAGATTCAGAGCCACACAGCTCTCTTTCACGATCCCAAAGTGCAACTGAGAGCCTATCTTCTACAGATGATGATTATGAATATGTGTCTAGTGTCGTCAAGGACACCAGCAGTCCATTTTCCCCGGGCGGCCTGGGTTTCAACTGCCGCATAAAGAAACCCAAAGGCCCTCGAGATCCACCGGCTGAATGGAGTCGCGCAGAAAGATGAAACCGCTGAAGGTTTtaggttttatataaaaataactcgGTGTAGCCTGTTTCAGTACTTTACACTGGGTAATAAgcactatttattttctttactggGATTGCTGTTTTAAATACTGAGGAAATGCATGTACAGTAGTGGAGTTTATTGGTGTATTTGTGGCAAAGCAGACCTTGCAAGTGCTATAGGAACTTTTCAGCGCACGCTGATGCAAGAATGCATGCGatttttgtaatcattttagTCGACTtacgttatttttttatatgccgATCTCTCCTAATGTTGTTTACAGTGTAAATGTGAATCATGATCTGTTCTAATGTATTCATCTGACACCGGTAAGTTGCAGTTTAGTTTCAGTACgtgtttattttgtacttattttggtttttatatcacattaaaacattttacgtCAAACCGAA

Function

NR:

description
PREDICTED: tyrosine-protein phosphatase non-receptor type 18-like isoform X2

GO:

id name namespace
GO:0006470 protein dephosphorylation biological_process
GO:0004725 protein tyrosine phosphatase activity molecular_function

KEGG:

id description
K18024 PTPN12_18_22; tyrosine-protein phosphatase non-receptor type 12/18/22

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043247744.1 True 2089 mRNA 0.45 17 4674326 4689478
XM_043247745.1 False 2057 mRNA 0.45 16 4674326 4689480
XM_043247746.1 False 1870 mRNA 0.45 16 4674326 4686702
XM_043247747.1 False 1844 mRNA 0.45 16 4674326 4689342

Neighbor

gene id symbol gene type direction distance location
plxna3 plxna3,LOC107734520,LOC107653403,LOC107743094,LOC107674285,LOC106572068 coding downstream 18857 4510069 ~ 4655469 (-)
slc6a8 slc6a8,LOC107734513,LOC103036862,LOC107653404,LOC108441094 coding downstream 208269 4432982 ~ 4466057 (-)
zgc:86609 zgc:86609,LOC107653429,LOC107743102,LOC107601757,LOC107734524,LOC107674347,LOC108265646 coding downstream 358590 4311724 ~ 4315736 (-)
abt1 LOC107743137,LOC107601758,LOC107653431,LOC107727410 coding downstream 444786 4226724 ~ 4229540 (-)
cdk16 cdk16,LOC107674341,LOC107584883,LOC107653433,LOC107601769 coding downstream 458947 4185253 ~ 4215379 (-)
si:dkey-8e10.3 si:dkey-8e10.3,LOC107743123,LOC107601742,LOC107674312,LOC107734510,LOC107653415,LOC107584926 coding upstream 164306 4853786 ~ 4860301 (-)
slc66a1 pqlc2,LOC107734535,LOC107674372,LOC107725314,LOC107664981 coding upstream 664139 5353619 ~ 5361985 (-)
trim33 trim33,LOC107725313,LOC107734526,LOC107664979,LOC107570974 coding upstream 673246 5362726 ~ 5384419 (-)
bcas2 bcas2,LOC107664982,LOC107725297,LOC107734517,LOC107674303 coding upstream 696227 5385707 ~ 5390120 (-)
dennd2c dennd2c,LOC107665005,LOC107598967,LOC107734514,LOC107674357,LOC107725285,LOC107566809 coding upstream 701345 5390825 ~ 5410171 (-)
G61114 NA non-coding downstream 1326 4672173 ~ 4673000 (-)
G61083 NA non-coding downstream 199643 4474442 ~ 4474683 (-)
G61062 NA non-coding downstream 243924 4423728 ~ 4430402 (-)
G61075 NA non-coding downstream 256221 4413285 ~ 4418105 (-)
G61067 LOC107601748,LOC107743098,LOC107653422,LOC107584889,LOC107734530,LOC107674365 non-coding downstream 285144 4388176 ~ 4389182 (-)
G61135 NA non-coding upstream 48674 4738154 ~ 4740201 (-)
G61170 kcnd1,LOC106532789,LOC103362488 non-coding upstream 134534 4824014 ~ 4826939 (-)
G61183 NA non-coding upstream 162799 4852279 ~ 4853456 (-)
G61186 NA non-coding upstream 177501 4866981 ~ 4867186 (-)
G61188 NA non-coding upstream 187480 4876960 ~ 4885431 (-)
G61071 LOC107601747,LOC107653424,LOC107734537,LOC107674377,LOC107578221 other downstream 277252 4393213 ~ 4397074 (-)
G61023 NA other downstream 366827 4300992 ~ 4307499 (-)
G60967 LOC107674359,LOC107701814,LOC107727428,LOC107743108,LOC107552221 other downstream 582169 4088724 ~ 4092157 (-)
zgc:113363 LOC107743117,LOC107701819,LOC107727412,LOC107584929 other downstream 667520 4000331 ~ 4006806 (-)
lhfpl4b lhfpl4b,LOC107584928,LOC107674308,LOC107727430,LOC107743140,LOC107701811,LOC107552174,LOC103032126,LOC108440531 other downstream 823736 3845453 ~ 3850590 (-)
LOC122350811 NA other upstream 497774 5187254 ~ 5187921 (-)
LOC122349940 fnbp1,fnbp1a,LOC107720911,LOC107675683,LOC107661630,LOC107757295,LOC107674371 other upstream 506272 5195752 ~ 5207522 (-)
nr1h5 nr1h5,LOC107653410,LOC107598964,LOC107725330,LOC107674374,LOC107734534,LOC107570978 other upstream 651914 5341394 ~ 5351279 (-)
pip5k1bb pip5k1bb,LOC107664977,LOC105901155,LOC107566804,LOC108412809,LOC108265367,LOC108234418 other upstream 786733 5476213 ~ 5510943 (-)
c8h9orf116 LOC107757294 other upstream 915692 5605172 ~ 5609572 (-)

Expression


Co-expression Network