zgc:152830 (zgc:152830,LOC107550967,LOC107657328,LOC107703177,LOC107554415,LOC107712486)


Basic Information

Item Value
gene id zgc:152830
gene name zgc:152830,LOC107550967,LOC107657328,LOC107703177,LOC107554415,LOC107712486
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 18608715 ~ 18614892 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043247762.1
GATCGGGGAAAAACTACAGTTTCGCTCATCACGTGACTCCGGCGGTCACGTGACGTGTTTTCGAAATATCTCAGCTGACATCACGACTTCACTTCTGCGAGACGACAGGAGAATACGGCAGGATGTCTGGGAGTGTCCAGCCTCTCCAGTGTACCACTGACTGCAAGGACCAGAAttTTGATGGCATAATCTTGATATGCCAGAGTTTTGAGCAGCTTCCCGATGAGCTGGAGTGTTTGAAAGCACCGTTGCAGGATTACAGCGCAGTGGACTGTTGCGTCGGTGAAGAGGTGGTGGTGGTTCGGGTTCCTGGACTCTCTGGAAACAGACTGGTGTTTGCCTGCACCGGTCCGGTGAATCGGGACTACGATGATGTCCGGCGCTTCAGTGACGCCGCAGCTAATGGCATTAAGAGGGCTCTGAAAGCTGGCATGCAGCGCCCTCTGTTGGTTTGTCCTCCACACAACAACTATGCAAAGAGCACCTTAGTGGCTGTCCTAGGAGCCCTGCATGTTCTCTACACGCCTTTAGAGGTGAGGGAGCACAAGTCGTCCCCTCATAAAGTGGCTGTGCTGGGCGTCTGGGTGAAGAACCGGgcgcagggagaagccattacTGAGCTGGCCACTGCTCTGGAGAGCGGCAGGTTTGTGTATCGTGACATCGGTGGCTCTGACCCGGAGCGGATGGCTGCCCCTCGGGTAGCGGAGTACGTTCAAGCTGTTTTCAAGGACACTCCTGTAACGGTGACGGTAGTGAGTAACCTGAATACTCTGGAGAAAGAGTATCCCTGTTTGGCTGTGGTGAACCGCTGCGCTAACACTGTGCCGCGTCACCAGGCCCGTGTGATCAAGCTGCTGTACTGTGGGGAAGGACCCATTCAAAAGACTCTCATGGTGGTGGGCAAGGGCATTACGTATGACACCGGCGGAGCCGACATCAAGGCCGGGGGAATCATGGCTGGAATGCACAGAGATAAATGTGGATCTGCCGCCGTGGCCGGCTTCTTCCAGatcTTGGCCAAACTAAAGCCCAAACACCTGAAGGTTGTGGGTGCAATGGCAATGGTGCGAAACAGCGTCGGATCTGaCTGCTTTGTAGCTGACGAGTTGGTGGTGTCCCGTGCCGGTCGTAGAATCCGAGTTGGAAACACTGATGCTGAAGGAAGAATGGTCATGGTGGACTTGCTGTGTGAGATGAAGGAACAGGCATTGCAGGAAGTGTCTCCTCATCTCTTCACTATAGCCACTCTGACAGGACATGCTATCAGAGCCATGGGACCACATTATTCTATCATAATGGATAACGGCGCTGCTCACCGCTCAGGAAACGCTCTGCAGTGGCAGAAAGCGGGAGAGATGCTGGGAGATCTGTTCGAGGTGTCCACCATTCGCCGAGAGGATTACGAGTTCCACAAAGGGAAGTCCGAGTATGAGGAGATCCTGCAGTCCAATAACCTGCCTTCGTCCGCCACACCTCGCGGACACCAGACACCCGCTGCCTTCCTCATTATGGCTTCGGGGCTGGATAAGCATGGAGTGGACTCGGACAAACCTCTTCCTTACTCCCATATTGACATCGCAGGATCCAGCGGCCCTTTCCCTGGTGTCCCAACAGGTGCCCCAATTCTTGCCATGGCAACAAAGTACATGGAGTTTTGAATGCACGTCCAATGATTTTTCTGATACTTCATTATTTCCGTCTACTGCCATTTCTCTATTAATGGTGTCATATCTGCTCCGTCTGACATGTGTATTCATGTAAAACTAGAGCAAATCATTATATTTGTTCCTTCTTATCCTTCCATTATAAACTGTCCATTTTTTGCTGCtccatatttacataaatgcatcTCTTCACGTCCTTAAAAACCTTTACTCTCCTCTTACTCACACCCAAGATCATCTTATTTCTTTAGTACAGTCCAGGTTTTCAACAAGCATTTAACAAGGTTAAAGTGAATTAACAAcctaagtgttttattttggtttttacCCGGTAGCCTTACAGTTTCTCAGTTGATCTGACAGGAAAGAGGAGGTGGGGAATCTGAGCCAGTGATTGATATTGAATTTGCATCTGTGACTTTGTTTGGTAAAACAGCTTATTGTATAACTGCCCATTTTGTAGAAATGTGTAATggaaaatcaataaaatcattttggaaaataaaa

Function

symbol description
zgc:152830 Predicted to enable manganese ion binding activity and metalloaminopeptidase activity. Predicted to act upstream of or within proteolysis. Predicted to be located in cytoplasm. Is expressed in macrophage and yolk syncytial layer.

NR:

description
unnamed protein product

GO:

id name namespace
GO:0006508 proteolysis biological_process
GO:0005737 cytoplasm cellular_component
GO:0004177 aminopeptidase activity molecular_function
GO:0030145 manganese ion binding molecular_function
GO:0008235 metalloexopeptidase activity molecular_function

KEGG:

id description
K01255 CARP, pepA; leucyl aminopeptidase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043247762.1 True 2174 mRNA 0.50 16 18608715 18614892

Neighbor

gene id symbol gene type direction distance location
dusp2 dusp2,LOC107657330,LOC107712482,LOC107550972,LOC107554416,LOC107703175 coding upstream 152176 18453576 ~ 18456539 (+)
LOC122350731 LOC107703135,LOC107753145,LOC107550932,LOC107712468,LOC107657321 coding upstream 161654 18443075 ~ 18447061 (+)
gck gck,LOC107657322,LOC107550933,LOC107712466,LOC107753094,LOC107703174 coding upstream 191695 18408086 ~ 18417020 (+)
orai1a orai1a,orai1,LOC107550979,LOC107687980,LOC107703171,LOC107753099,LOC106585507 coding upstream 254449 18349093 ~ 18354266 (+)
rnf34a rnf34a,rnf34,LOC107687978,LOC107712480,LOC107703169 coding upstream 275002 18326458 ~ 18333713 (+)
olfml2a olfml2a,LOC107657324,LOC107550966,LOC107554414,LOC107703179 coding downstream 19404 18634296 ~ 18651554 (+)
LOC122350979 LOC107728433,LOC107676613 coding downstream 49054 18663946 ~ 18672229 (+)
arpc5la arpc5la,LOC107571143,LOC107728439,LOC107550963,LOC107676626,LOC107753090,LOC108411248 coding downstream 60427 18675319 ~ 18678826 (+)
si:ch211-158d24.4 NA coding downstream 110891 18725783 ~ 18729136 (+)
si:dkeyp-14d3.1 si:dkeyp-14d3.1,LOC107676622,LOC107728438,LOC107659267,LOC107550917,LOC107753136 coding downstream 146755 18761647 ~ 18941677 (+)
G64878 NA non-coding upstream 157351 18451042 ~ 18451364 (+)
G64862 NA non-coding upstream 217504 18390674 ~ 18391211 (+)
G64858 NA non-coding upstream 241605 18366570 ~ 18367110 (+)
G64855 NA non-coding upstream 259932 18347437 ~ 18348783 (+)
G64841 NA non-coding upstream 321174 18287296 ~ 18287541 (+)
G64889 NA non-coding downstream 2086 18616978 ~ 18618184 (+)
G64910 NA non-coding downstream 59075 18673967 ~ 18674344 (+)
G65073 LOC107564452,LOC107733255,LOC107755688,LOC107702821,LOC107733264,LOC107668424,LOC553487,LOC107564453 non-coding downstream 397041 19011933 ~ 19234600 (+)
G65094 NA non-coding downstream 434390 19049282 ~ 19212125 (+)
G65108 NA non-coding downstream 568798 19183690 ~ 19347044 (+)
gpat2 gpat2,LOC107712449,LOC107550920,LOC107657318 other upstream 8231 18565699 ~ 18600484 (+)
adra2b adra2b,LOC107712484,LOC107657329,LOC107554404,LOC107753091,LOC107550971,LOC107703147 other upstream 144168 18460051 ~ 18464547 (+)
sb:cb288 NA other upstream 184910 18418948 ~ 18423805 (+)
lrrc75ba lrrc75ba,LOC107712478,LOC107753104,LOC107703167,LOC107554425,LOC107687975,LOC105891565,LOC108414797 other upstream 323754 18258220 ~ 18284961 (+)
LOC122350298 pla2g1b,LOC107703141,LOC107753147,LOC107554411,LOC107554412,LOC107550943 other upstream 528146 18071485 ~ 18080569 (+)
si:ch211-158d24.2 si:ch211-158d24.2,LOC107550960,LOC107703181,LOC107676623,LOC107728434,LOC107571139,LOC107753137 other downstream 80562 18695454 ~ 18722246 (+)
G65100 sf3a1,LOC107564451,LOC107550953 other downstream 480055 19094947 ~ 19096071 (+)
G65105 LOC107747205,LOC107550912,LOC107683889,LOC108412149 other downstream 505052 19119944 ~ 19152305 (+)
LOC122350733 LOC107702875,LOC107722994,LOC107591954,LOC107573969,LOC107722996,LOC107691581 other downstream 585096 19199988 ~ 19201687 (+)
pqbp1 pqbp1,LOC107702814,LOC107683912,LOC107747222 other downstream 657200 19272092 ~ 19273770 (+)

Expression


Co-expression Network