lpxn (LOC107676702,LOC107717550,LOC107585869,LOC107695247,LOC107750911)


Basic Information

Item Value
gene id lpxn
gene name LOC107676702,LOC107717550,LOC107585869,LOC107695247,LOC107750911
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 9852232 ~ 9856606 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043247781.1
TCAGTTTCACATTTGACATCGGGCTCAACCCACAGCTGCATGTATCAGATCACCCTACCACACATGCTCACTAGGAACACACAACGCACGCTGCTTACCTCTCATCTCACAGCCCAGACCACAATGGACGAACTCGACATGCTTTTAGAGGAGTTGGCTCAGAACTCCACCCAGACTTCTGCACCCATTCCACCCAAAACTCTCCAACTGGGAGCCTCGGTTAAAAGTAACAACATATCCCAGCTTGAACAAACCGGTCCAGGAAAGCCATGTAATCCTTACAGTGTGGTTCCGGTCCCTGTGGAGGCCGGAGTGATGAGTCCTGGCACAGCTACACGAGAGCTGGACTCCATCATGAATGATCTGCTAGGGCTAGGCCTGGAGATTCTGGAACCAGTTCCCACATCCAACCCGCCTCCATTGGCTCACAAATCAATGAAAGGCAAAAAAACGGAGGAAAATAAAGGAAGTGATGGTGGACAGGAACCACAGCATCCTCCTCTGTCAGAGAAAGCATCCAAGAATGTGGATGCTATAGACGACTTGCTGGGCTCTCTCACCTCAGACATGGAGAAAATGGGGGTCCAGACAGCTGCCAAAGGCCACTGTGCTTCTTGTGGCAAGTGTATAGCTGGGAAGATGATCACAGCTCTGGGTCAGGTGTGGCATCCCGAACACTTTGTGTGCACGGCATGCAGGGAGGAACTGGGCACGTGCGGTTTCTTTGAGAGAGATGGCAAGCCGTACTGTGAGAAAGACTACCAGAACCTCTTCTCCCCTCGCTGTGCTTACTGCAAGGGTCCTATTATTCAGAACATTCTGACAGCGATGGATCAAACATGGCACCCAGAACATTTTTTCTGCAGCCACTGTGGAAATGTGTTTGGACCTGATGGGTTTATGGAGAGAGATGGTAAACCATATTGCTCTAGGGATTTCTACCGTCTCTTTGCACCCAAATGCTCCGGCTGTGGAGAGCCAGTGAAGGAGAACTATCTGTCTGCAGCCAATGGAACCTGGCACCCTGACTGCTTTGTCTGTGCGGACTGCCTGAAGCCTTTTACAGACGGTTGCTTCCTGGAGTTGAACGGTCGGCCCCTCTGTTCCCTGCACTATCACTCCAGACAGGGCACTCTGTGTGGGACCTGCGGAGAGCCCATCTCGGGTCGCTGCATCGCTGCTCTGGACCGCAAGTTTCACCCTGAACACTTTGTGTGTGCGTTCTGTCTTCGGCAACTGAGTCAGGGAGTGTTTAAGGAGCAGGGAGGGAAGCCGTACTGTTCGGTTTGTCATGCCAAACTCTTCgtgtgaaaaatcacatttctcACTTGAATACAATCTTTCAGAGCAGGGGTTCTCAACCTTTTCGAGAACCCCCCCAcctacaaaataatacaaatgaatatactaatatattagaaaatatatgaaaattgGATTCCGGGATTGTTAAAGCTTGTATTTTCCtcaataaaaactgtataaaaattaaa

Function

NR:

description
PREDICTED: leupaxin isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043247781.1 True 1493 mRNA 0.49 9 9852232 9856606

Neighbor

gene id symbol gene type direction distance location
trabd2b si:ch211-120j21.1,LOC107717551,LOC107585868,LOC107676673,LOC107695245,LOC107548850,LOC108442342 coding downstream 14782 9786252 ~ 9837450 (-)
edem3 LOC107717559,LOC107585860,LOC107750782,LOC107548759,LOC107700180 coding downstream 234106 9606505 ~ 9618126 (-)
zgc:92140 zgc:92140,LOC107676598,LOC107585858,LOC107717558,LOC107700167,LOC107548740,LOC107750760 coding downstream 246266 9581828 ~ 9605966 (-)
colgalt2b colgalt2,LOC107751084,LOC107700142,LOC107585927,LOC107676963,LOC107717557 coding downstream 272379 9562094 ~ 9579853 (-)
rgl1 rgl1,LOC107750730,LOC107717560,LOC107657943,LOC107700121 coding downstream 299928 9528966 ~ 9552304 (-)
rfx2 rfx2,LOC107676724 coding upstream 43890 9900496 ~ 9933011 (-)
acer1 acer1,LOC107731201,LOC107676796,LOC107585930,LOC107550428 coding upstream 113522 9970128 ~ 9976762 (-)
myo1f myo1f,LOC107750961,LOC107585872,LOC107548903,LOC107731286,LOC107695252,LOC108413823 coding upstream 123030 9979636 ~ 9995108 (-)
dohh dohh,LOC107745802,LOC107548993,LOC107585881,LOC107695215 coding upstream 397284 10253890 ~ 10256950 (-)
LOC122349939 LOC107731225,LOC107701761,LOC107585934,LOC107745801,LOC107550447,LOC100005423 coding upstream 400539 10257145 ~ 10259192 (-)
G62576 NA non-coding downstream 120078 9731906 ~ 9732154 (-)
G62568 NA non-coding downstream 141236 9710646 ~ 9710996 (-)
G62567 NA non-coding downstream 143011 9708973 ~ 9709221 (-)
G62565 NA non-coding downstream 148634 9703376 ~ 9703598 (-)
G62564 NA non-coding downstream 149041 9702959 ~ 9703191 (-)
G62670 NA non-coding upstream 186582 10043188 ~ 10043398 (-)
G62749 mob3a,LOC107695254,LOC107585875,LOC104921817,LOC103368804,LOC107731185,LOC103137270 non-coding upstream 198445 10055051 ~ 10057928 (-)
G62768 NA non-coding upstream 220811 10077417 ~ 10077652 (-)
LOC122350767 NA non-coding upstream 271279 10127885 ~ 10150991 (-)
G62788 NA non-coding upstream 295633 10152239 ~ 10152905 (-)
fam78bb fam78bb,LOC107717547,LOC107676968,LOC107751100,LOC107550401,LOC107585866,LOC107695225 other downstream 143611 9700394 ~ 9708621 (-)
mindy4 LOC107699968,LOC107585839,LOC107548580 other downstream 589406 9257243 ~ 9262826 (-)
pola2 pola2,LOC107599808,LOC107657899 other downstream 1194946 8652304 ~ 8657286 (-)
mrps36 mrps36,LOC107657871,LOC107599810,LOC107699743,LOC107743861,LOC107548364,LOC107710901 other downstream 1202249 8647270 ~ 8649983 (-)
eps15 eps15,LOC107752431,LOC107599798,LOC107743869 other downstream 1435679 8392345 ~ 8416553 (-)
mllt1a mllt1a,LOC107731200,LOC107676782,LOC107695250,LOC107549968,LOC107585916 other upstream 98075 9954681 ~ 9969485 (-)
adamts10 adamts10,LOC107676806,LOC107585873,LOC107731268,LOC107695212,LOC107549976,LOC106613844 other upstream 138941 9995547 ~ 10041769 (-)
smim24 smim24,LOC107580287 other upstream 388590 10245196 ~ 10248156 (-)
G62760 gpr37l1b,LOC107585901,LOC107731282,LOC107668115,LOC107549203,LOC107695275,LOC107745785,LOC108441645 other upstream 532577 10389183 ~ 10392043 (-)
G62826 cry1ba,LOC108265656,LOC108441644,LOC103461922,LOC105026018,LOC102226488 other upstream 584158 10440764 ~ 10480051 (-)

Expression


Co-expression Network