fam102aa (fam102aa,LOC107671017,LOC107699668,LOC107752986,LOC107754406,LOC105891604,LOC108430372)


Basic Information

Item Value
gene id fam102aa
gene name fam102aa,LOC107671017,LOC107699668,LOC107752986,LOC107754406,LOC105891604,LOC108430372
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 2106390 ~ 2133931 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043247803.1
ATAATCTCTATAGAGAGAATCTAAACGCGAGTCGATCCGGAGACAGAATCAAATCTCCTGCAAACACAGGAGACAGAAAACCCTGAAAACACGGCTGTTTCACTCGATGAGTGTCGATGCTGCTCGTGTGTCAGAGCTGGAGAGTTTATTAGGCTGCGCGAGGATCGGTGAGAAAATCCGACGCGATTGATTGTTCGCGGATGATCAATGAAAACATGACCCGCGTCCACGGCCGGATCAAACCGTTCACAGAGAACTGAAGCGGCTCTCGGGTTCATGGCGTTTCTCGTCAAGAAGAAGAAGTTTAAGTTTCAGACGCACGTTACTCTGGAGGAGCTGACCGCCGTGCCGTTCGTCAACGGAGTTTTGTTCTGTAAGATCAGACTGCTGGATGGAGGAGATTTCACAGCTTCATCATCCAGAGAAGAGGTCCACCAGAACGCCGTTCGCTGGAGGAAGAGGTTCTCCTTTGTGTGCAAAATGAGCGCCAACCCCAACACCGGCGTTCTGGACCCCTGCGCGTGCCGCGTCTCGGTCAGGAAGGAACTCAAAGGAGGAAAAGCTTATTCAAAGCTGGGCTTTGCTGATCTGAACATGGCGGAGTTTGCTGGCTCGGGCTCCACCGCTCGCTGCTGTCTGCTGGAGGGATACGACACCAAGAATACCCGGCAGGACAACTCCATCctgaagGTGACCATCGGGATGACCCTCTTATCCGGAGATCCGTGTTTCAAAACTCCCCCAAGCACCGCCAAATCTATATCTGTGGCCGGCCGGGACCCTTCCCTGCAGCTGGACTGTAAAGGAGAAGGAACCGCTGAGGTTTTGCCCCGACTGACCAAACAGAGACCTTCTATACTCGGCTCcgCTCTTCCTGAGGAGGTGGATCAGGTTCCCGATGAAGCGTTTCACACGGGCCATTCACGAAACTCAAGTTATGCCAGCCAGCAGAGCAAACTCtcagGTTACAGCACCGAACACTCCTGCTCCTCCAGTCTGTCTGATCTGACCCATCGCAGGAACACATCTACAGGCAGCAGTGTGAGCGCAGACCCTCCGTCTGAGAGCGACACCCGTCCCGAGCGACCTCCGCGACCCCCGCGGCCCATGCTTCCCTCCAACAGACCGCCACGGTACGACCCCTGCGGCCGCCGGGAACCAAGTGCGCCACAGCCGGCGAAACTGACGCGTCCTTCTGTGTATTCCAGGAGGAAGCAGGATTCGGTGGAGGATCACCCGACCTGGGTCAACGACACGCGGATCGACGCGGACGACATCGTGGAGAAGATCGTCCAGAGTCAGAACTTTTCTGACATCAGTAACAATGAAGacagTAACCTGAGACTGTTTGTGAGCAGAGACGGAACCACAGCACTGAGTGGCATCCAGCTGGGAAACAGGGTCTCTGCTGGAGTCTATGAGCCGGTGGTCATTGAAAGCCATTAGATTTTCCCCCGTGATGTTTCCGTTTCCTCACCAGAATCCCGGAGGAATCACACTAATCTACTCCAGTCACCTCATGAATCAGATAAATGTTTGAGCGCTAAACCCCTGCAGGTGCCTGAAACACACCGCCATGATGCTTTTCCAGCAGATCTGCACGACAGAGACCTGATCTCATGTTTCTGACaggataaaagaaaaagataattGCCCATTTTTGTCTCAAAACCATTATTTGTTTCTAacagttctgagaaaaaagtaaGGCAAGATATACgttcagaattgcaagatataaactgaGAAAACTGGCAgtgtttaaacaaataaaaattaaattcagatttttttttcacctcagAATAGAAATTTAGACAAACTCCAAattgtaaaattcaaaaatggcAATTACCTTTTAGATTTCAGCTGCgtgctgttttgtgtgtgttttgtctcgtctgtttcttctctctcttctgtctctccTCTCGTCCGATGCCGTGTCTCTCATTCGCACTGAACACTAAGTTGTGACGTGACTGGGCTCTTCCTGGAGCGCCGGCCGGTCTGAGTCGCTGTGTCTTGGGTTTTCCTCTCGTCTTAAACTCGTTGCTGCGCGACACAAAACTCCCTCCGAACAGATTCTAGTGTTATAAAACCAGTTGAATGCACTTTACGAGAGAATCTCTCAGAAACCGTCCAGGTCACATTGCATctcaattaaagaaaaaaaaaattgactgaaAATGAGCTCACCCTCAGGTCGTTCGAGACGAGTTTGTTACATCACGAGatgctcagcagtgaatgggtgccgtcagaatgagagcccaaacatCACattaatccacagcactccggtccatcagttaatgtcagAAAAGACgtgcattttcatatttcataaccGAGGATCTGAGGAGGACTACATTTCCAGCACTTTTCAATTTGCTCCTTTcgatttttaatactttttttttgtagctatGAGAggcatttttgtcatttccatCACAAAtaattctgattattttcatttaaataattgctttatttttcacgTTAATTTTCTAATtactatttttgcatttcaagAATTTTAGGATGATGTAattaaatgccatttaaaaaaaaaaaaaaaaaccctgcaaatCTTAATTAAGACtaataatagtttttcttttttcagtgaattttgattttgtgatttaaaatatgatctggacgtttttgggggtttttttgtcgCAAGGTTTCATGAGATTCGCCGCAAATACTTTTGGAAGCCAAACCGCATAAAATACCTAATATTTCTTTACGTCTTctgtaaaaacatgtttgttgatGTTCAGCGTGActctaaatgcaaatgtaattcaTATCAGGACAGTAAAAGTTGGTCTTTATCACTCTGAAGGTCCTCAGGACGGGAACACCTCATGATGTTTTTTCAGCCGGCTGGTTATTGTCCTTCgagcaatcacacacacactcacacacagacagacacacacacacacacacacagacacagacagacacacacacacagacagacacacacacacagacagacagacacacacacacacacacacacac
>XM_043247804.1
AATCTCTATAGAGAGAATCTAAACGCGAGTCGATCCGGAGACAGAATCAAATCTCCTGCAAACACAGGAGACAGAAAACCCTGAAAACACGGCTGTTTCACTCGATGAGTGTCGATGCTGCTCGTGTGTCAGAGCTGGAGAGTTTATTAGGCTGCGCGAGGATCGGTGAGAAAATCCGACGCGATTGATTGTTCGCGGATGATCAATGAAAACATGACCCGCGTCCACGGCCGGATCAAACCGTTCACAGAGAACTGAAGCGGCTCTCGGGTTCATGGCGTTTCTCGTCAAGAAGAAGAAGTTTAAGTTTCAGACGCACGTTACTCTGGAGGAGCTGACCGCCGTGCCGTTCGTCAACGGAGTTTTGTTCTGTAAGATCAGACTGCTGGATGGAGGAGATTTCACAGCTTCATCATCCAGAGAAGAGGTCCACCAGAACGCCGTTCGCTGGAGGAAGAGGTTCTCCTTTGTGTGCAAAATGAGCGCCAACCCCAACACCGGCGTTCTGGACCCCTGCGCGTGCCGCGTCTCGGTCAGGAAGGAACTCAAAGGAGGAAAAGCTTATTCAAAGCTGGGCTTTGCTGATCTGAACATGGCGGAGTTTGCTGGCTCGGGCTCCACCGCTCGCTGCTGTCTGCTGGAGGGATACGACACCAAGAATACCCGGCAGGACAACTCCATCctgaagGTGACCATCGGGATGACCCTCTTATCCGGAGATCCGTGTTTCAAAACTCCCCCAAGCACCGCCAAATCTATATCTGTGGCCGGCCGGGACCCTTCCCTGCAGCTGGACTGTAAAGGAGAAGGAACCGCTGAGGTTTTGCCCCGACTGACCAAACAGAGACCTTCTATACTCGGCTCcgCTCTTCCTGAGGAGGTGGATCAGGTTCCCGATGAAGCGTTTCACACGGGCCATTCACGAAACTCAAGTTATGCCAGCCAGCAGAGCAAACTCtcagGTTACAGCACCGAACACTCCTGCTCCTCCAGTCTGTCTGATCTGACCCATCGCAGGAACACATCTACAGGCAGCAGTGTGAGCGCAGACCCTCCGTCTGAGAGCGACACCCGTCCCGAGCGACCTCCGCGACCCCCGCGGCCCATGCTTCCCTCCAACAGACCGCCACGGAGGAAGCAGGATTCGGTGGAGGATCACCCGACCTGGGTCAACGACACGCGGATCGACGCGGACGACATCGTGGAGAAGATCGTCCAGAGTCAGAACTTTTCTGACATCAGTAACAATGAAGacagTAACCTGAGACTGTTTGTGAGCAGAGACGGAACCACAGCACTGAGTGGCATCCAGCTGGGAAACAGGGTCTCTGCTGGAGTCTATGAGCCGGTGGTCATTGAAAGCCATTAGATTTTCCCCCGTGATGTTTCCGTTTCCTCACCAGAATCCCGGAGGAATCACACTAATCTACTCCAGTCACCTCATGAATCAGATAAATGTTTGAGCGCTAAACCCCTGCAGGTGCCTGAAACACACCGCCATGATGCTTTTCCAGCAGATCTGCACGACAGAGACCTGATCTCATGTTTCTGACaggataaaagaaaaagataattGCCCATTTTTGTCTCAAAACCATTATTTGTTTCTAacagttctgagaaaaaagtaaGGCAAGATATACgttcagaattgcaagatataaactgaGAAAACTGGCAgtgtttaaacaaataaaaattaaattcagatttttttttcacctcagAATAGAAATTTAGACAAACTCCAAattgtaaaattcaaaaatggcAATTACCTTTTAGATTTCAGCTGCgtgctgttttgtgtgtgttttgtctcgtctgtttcttctctctcttctgtctctccTCTCGTCCGATGCCGTGTCTCTCATTCGCACTGAACACTAAGTTGTGACGTGACTGGGCTCTTCCTGGAGCGCCGGCCGGTCTGAGTCGCTGTGTCTTGGGTTTTCCTCTCGTCTTAAACTCGTTGCTGCGCGACACAAAACTCCCTCCGAACAGATTCTAGTGTTATAAAACCAGTTGAATGCACTTTACGAGAGAATCTCTCAGAAACCGTCCAGGTCACATTGCATctcaattaaagaaaaaaaaaattgactgaaAATGAGCTCACCCTCAGGTCGTTCGAGACGAGTTTGTTACATCACGAGatgctcagcagtgaatgggtgccgtcagaatgagagcccaaacatCACattaatccacagcactccggtccatcagttaatgtcagAAAAGACgtgcattttcatatttcataaccGAGGATCTGAGGAGGACTACATTTCCAGCACTTTTCAATTTGCTCCTTTcgatttttaatactttttttttgtagctatGAGAggcatttttgtcatttccatCACAAAtaattctgattattttcatttaaataattgctttatttttcacgTTAATTTTCTAATtactatttttgcatttcaagAATTTTAGGATGATGTAattaaatgccatttaaaaaaaaaaaaaaaaaccctgcaaatCTTAATTAAGACtaataatagtttttcttttttcagtgaattttgattttgtgatttaaaatatgatctggacgtttttgggggtttttttgtcgCAAGGTTTCATGAGATTCGCCGCAAATACTTTTGGAAGCCAAACCGCATAAAATACCTAATATTTCTTTACGTCTTctgtaaaaacatgtttgttgatGTTCAGCGTGActctaaatgcaaatgtaattcaTATCAGGACAGTAAAAGTTGGTCTTTATCACTCTGAAGGTCCTCAGGACGGGAACACCTCATGATGTTTTTTCAGCCGGCTGGTTATTGTCCTTCgagcaatcacacacacactcacacacagacagacacacacacacacacacacagacacagacagacacacacacacagacagacacacacacacagacagacagacacacacacacacacacacacac

Function

symbol description
fam102aa Is expressed in female organism. Orthologous to human FAM102A (family with sequence similarity 102 member A).

NR:

description
protein FAM102A

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043247803.1 True 3045 mRNA 0.47 11 2106390 2133931
XM_043247804.1 False 2968 mRNA 0.46 12 2106392 2133931

Neighbor

gene id symbol gene type direction distance location
naif1 naif1,LOC107559603,LOC107753004 coding upstream 2484 2096159 ~ 2103906 (+)
si:ch211-51h9.7 NA coding upstream 34721 2069818 ~ 2071669 (+)
gle1 gle1,LOC107671035,LOC107699671,LOC107754403 coding upstream 37102 2061541 ~ 2069288 (+)
mrpl40 LOC107753002,LOC107559600,LOC107699643,LOC107560058,LOC107754402,LOC107671004 coding upstream 47665 2055331 ~ 2058725 (+)
enkd1 si:ch211-220d9.3,enkd1,LOC107754420,LOC107699630,LOC107657207,LOC107670972 coding upstream 91706 2006084 ~ 2014684 (+)
sh3glb2a sh3glb2a,LOC107671032,LOC107754407 coding downstream 5299 2139230 ~ 2152391 (+)
crb2b LOC107754408,LOC107699666,LOC107560064,LOC107568009 coding downstream 36580 2170511 ~ 2203097 (+)
lhx2b lhx2b,lhx2 coding downstream 189668 2323599 ~ 2331771 (+)
LOC122349879 LOC107670988,LOC107552177,LOC107552180,LOC107552179,LOC107670991,LOC107754429,LOC107752990,LOC107553051 coding downstream 291388 2425319 ~ 2428603 (+)
ctu1 ctu1,LOC107752993,LOC107699664,LOC107552165,LOC107754430,LOC107670973 coding downstream 294257 2428188 ~ 2431630 (+)
LOC122350140 NA non-coding upstream 79062 2024562 ~ 2027328 (+)
G60288 NA non-coding upstream 103387 2000761 ~ 2003003 (+)
G60281 vdac3,LOC107671013,LOC107559564 non-coding upstream 106922 1967120 ~ 1999468 (+)
G60269 NA non-coding upstream 153264 1952793 ~ 1953126 (+)
G60265 NA non-coding upstream 156094 1947148 ~ 1950296 (+)
G60296 NA non-coding downstream 19540 2153471 ~ 2156394 (+)
G60297 LOC107568007,LOC107754426,LOC107670998,LOC107699638,LOC107560048 non-coding downstream 25383 2159314 ~ 2162044 (+)
G60323 NA non-coding downstream 29376 2163307 ~ 2165242 (+)
G60328 NA non-coding downstream 59026 2192957 ~ 2204310 (+)
G60335 NA non-coding downstream 210005 2343936 ~ 2344169 (+)
LOC122350758 dynll1,dynll2a,LOC103397138,LOC100698873,LOC107559583 other upstream 66554 2037699 ~ 2039836 (+)
LOC122350053 NA other upstream 70410 2030824 ~ 2035980 (+)
polb polb,LOC107670984,LOC107722860 other upstream 86356 2014859 ~ 2020034 (+)
G60259 LOC107560031,LOC107559593,LOC108412499,LOC107754396 other upstream 188019 1915460 ~ 1918371 (+)
pggt1b pggt1b other upstream 887586 1210815 ~ 1218804 (+)
G60788 lhfpl4b,LOC107584928,LOC107674308,LOC107743140,LOC107727430,LOC107701811,LOC103032126,LOC105898894 other downstream 1714683 3848614 ~ 3850557 (+)
LOC122350109 LOC107743114,LOC107552217,LOC107674346 other downstream 1790930 3924861 ~ 3931488 (+)
ccdc120a LOC107701815,LOC107674368,LOC107584880,LOC107727423,LOC107552222 other downstream 1895372 4029303 ~ 4073897 (+)
LOC122350082 si:ch211-240g9.1,LOC107598959,LOC107653411,LOC108438565,LOC108264952,LOC105013926,LOC100700110,LOC105889737 other downstream 2970639 5104570 ~ 5264366 (+)
LOC122350084 atp2a2,LOC107757297,LOC107674294,LOC107566800,LOC107599024,LOC108444117 other downstream 3093021 5226952 ~ 5229608 (+)

Expression


Co-expression Network