LOC122351034 (LOC107552255)


Basic Information

Item Value
gene id LOC122351034
gene name LOC107552255
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 22757776 ~ 22760114 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043247865.1
CTCCGTGGGATCTGAATCTAATGCCGGTTCTGGAGAACGGCACCGGACGGCCCCCGCTCAACAGCACGGATCCCCCGCCGCCGGATGATTTGGATGTGAACACGGACGTTTATTCCAAAGTGCTCGTGACCTTGATTTATGCTGTGCTGTTCGCAGTCGGCTTAATCGGTAACTCCGTGACCCTGTGCATATCTCTCCACTGGAGATCCATCAGACATCTCCAAAGCACCGTCCACTATCACCTCGCCAGCCTCGCGGTGTCCGACCTGCTGATTCTGCTGCTGTGCATGCCGGTGGAGCTTTACAACTTCATCTGGATTCATCACCCGTGGGCTTTCGGCGAGGTGGTCTGCAGGGGCTATTACTTTCTGCGGGACGGCTGCTCGTACGCCACGGCGTTTAACATCGTGAGCCTGAGCGTGGAGCGCTACATGGCCCTCTGCCACCCGTTCAAAGCCAAGAGGCGCGCGTCTCGCGGACGCACCAGGAGACTCATCTGCGCGCTCTGGTGCGCGTCGCTCATTCTGGCCTCTCCGATGCTCCTGACCATGGGGCAACTTAACGTGGGGGAAGAAAGCATCTGTACCATCGTGGTCTCCTCCAGCACCGCCAAAACCGTTCTACAGataaATGCCCTTCTCTCTTTTGTTGTGCCAATGCTGGTGATTACAGTGATGAACGGCCTGATAGGACATCAGCTCCAGAGAATGACCCATCATGATTTATACCGTTCAGTAGCTTCAGATCACAGCGGCACCACCGAGACAATCCGTCAGAGATCCCTACGCCACGGTGTCAAAGTCCTGCGTGGGGTGGTTTTAGCCTTTGTTTTATGTTGGTTTCCTTATCACTGTCGAAGACTGATGTACTGTTATGTAACTGGGTGGACAATTGCACTTTACGATTTCTACCATTACTTCTACATGGTGACAAACGTGCTTTTCTATGTGAGCTCTGTGATCAATCCCATCTTGTACAACCTGGTCTCAACCAATTACCACCAAGTCTTCTTCTCCACTGTCACTTACTTTTGCCAAATGCAGTCTAAAAGACAGAGGACTAAGCAGAGCAAGAGGAGCTCACAGCTACCTCAGCAACTCCAGTCGTCCCTAGTGACACCCCGTAACAGTCAGCAGACCCTTTGCCCCATGGTGGTCATGGAGACTATGCGCTGATGTTAATTCATTC

Function

NR:

description
PREDICTED: neurotensin receptor type 1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043247865.1 True 1188 mRNA 0.53 4 22757776 22760114

Neighbor

gene id symbol gene type direction distance location
LOC122350258 LOC107757082,LOC107757083,LOC107752574,LOC107757080,LOC107678397,LOC107575601,LOC107703982,LOC107752571 coding downstream 1591 22748545 ~ 22756185 (-)
LOC122350076 LOC107748967,LOC107595759,LOC107698846,LOC107678416,LOC107602469,LOC107710786 coding downstream 129217 22625423 ~ 22628559 (-)
LOC122349924 nfu1,LOC107664472,LOC107678441,LOC107553147,LOC107570003,LOC101170349 coding downstream 242741 22511952 ~ 22515035 (-)
rasef rasef,LOC107678388,LOC107752555,LOC107755592,LOC107562642 coding downstream 300507 22438470 ~ 22457269 (-)
rmi1 rmi1 coding downstream 387159 22366400 ~ 22370617 (-)
LOC122350037 LOC107575601,LOC107757083,LOC107574252,LOC107752574,LOC107678367,LOC107678397,LOC107752571,LOC107552256,LOC107703982 coding upstream 19140 22779254 ~ 22790487 (-)
LOC122351014 LOC107757082,LOC107703982,LOC107757083,LOC107757080,LOC107678397 coding upstream 52741 22812855 ~ 22816347 (-)
LOC122349927 LOC107710781,LOC107748971,LOC107678464,LOC107698851 coding upstream 58855 22818969 ~ 22824591 (-)
aak1a aak1a,LOC107678431,LOC107710782,LOC107698849,LOC107748970,LOC108426667,LOC107595757,LOC107602451 coding upstream 76995 22837109 ~ 22874898 (-)
rer1 rer1,LOC107698848,LOC107595758,LOC107748969,LOC107678415,LOC107710784,LOC107602473 coding upstream 115004 22875118 ~ 22880115 (-)
G66235 LOC107703993,LOC107755595 non-coding downstream 52651 22699448 ~ 22705125 (-)
G66217 LOC107664463,LOC107755600 non-coding downstream 100117 22654971 ~ 22657659 (-)
G66207 NA non-coding downstream 132599 22580402 ~ 22625177 (-)
G66206 NA non-coding downstream 208458 22547651 ~ 22549318 (-)
G66163 gkap1,LOC107562640,LOC107757429,LOC107664507,LOC107678454,LOC107553117 non-coding downstream 369993 22386082 ~ 22387783 (-)
G66337 NA non-coding upstream 222597 22982711 ~ 22983165 (-)
G66339 NA non-coding upstream 225232 22985346 ~ 22986961 (-)
LOC122350914 NA non-coding upstream 291768 23051882 ~ 23054592 (-)
G66368 NA non-coding upstream 480858 23240972 ~ 23245510 (-)
G66372 prdm16 non-coding upstream 623024 23383138 ~ 23383354 (-)
LOC122350259 LOC107678445,LOC107752560,LOC101882811,LOC107553112,LOC107757078,LOC108426735,LOC107703990,LOC107757081,LOC107553140,LOC107678447,LOC107752570 other downstream 10697 22727180 ~ 22747079 (-)
LOC122349902 nfu1,LOC107678441,LOC107553147,LOC107664472,LOC107570003 other downstream 117453 22637275 ~ 22640323 (-)
gfpt1 gfpt1,LOC107678434,LOC107553119,LOC108426669,LOC107710818,LOC107752562,LOC103362312,LOC101170101,LOC107562636 other downstream 491915 22243202 ~ 22265861 (-)
antxr1a antxrl,antxr1a,antxr1,LOC107661337,LOC107710819,LOC107562635,LOC108265351 other downstream 647689 22075010 ~ 22110087 (-)
LOC122350973 dmtn,LOC107586118,LOC107687659,LOC107720576,LOC107553712,LOC107705088,LOC107571963,LOC107702870,LOC107723027 other downstream 689019 22060015 ~ 22068757 (-)
G66310 NA other upstream 35508 22795622 ~ 22796362 (-)
ddx51 ddx51 other upstream 69090 22829204 ~ 22835591 (-)
tprg1l tprg1l,LOC107698845,LOC107710788,LOC107678419,LOC107748986 other upstream 166342 22926456 ~ 22931165 (-)
G66410 LOC107687112,LOC107595766 other upstream 816839 23576953 ~ 23583368 (-)
G66451 LOC107595774,LOC107733967,LOC107748958,LOC107693424 other upstream 897951 23658065 ~ 23663536 (-)

Expression


Co-expression Network