slc35d2 (slc35d2,LOC107570982,LOC107570985)


Basic Information

Item Value
gene id slc35d2
gene name slc35d2,LOC107570982,LOC107570985
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 558256 ~ 563214 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043247950.1
AGAACGCGGTTATGTAACGCGCTCGTTCAGCGGCTCTCCGGACTGGCTTCGGACCCGAGCGCAGCATGCTCGTCTCCAGACCGGCGAAAGGAGCGAAAACCGCGAGCGCCGAGGAGCTTCTCGCCTGAGGGAAACCGAAACAGACATGACGTTGAGCGGCGAGGGCGAGCGCGCGAGACTCATGAAGTTCGCTTCCGCCGCCTTTTACGCCCTTTGCTCGTTTTCCATCATCGTGgtcaataaaagtattttaactgAATACAAGTTCCCGTCGTTTATGTTTCTCGGGATCGGACAGATGACGGCTACGATCATCATTCTGTACGTTGCCAAAATGAACAAAGCAGTCAGCTTTCAGGACTTCGACAAAAGTATTCCTGCAAAgATATTTCCTTTGCCGTTGCTGTACGTGGGGAATCACGTGACCGGATTAGGAGGCACTAAGAAACTCAGCTTACCCATGTTCACTGTGCTCAGAAAATTCACCATTCTACTCACAATGATCATGGAATCCAGGATACTGAGGAAAAGCTTTGCTCCGTCGCTGGTTTGCAGCGTTCTGGCTATAGTCGCGGGCGCTCTGGTGGCGGCCAGCTCGGACCTGTCCTTCAACGCCGAAGGATACACGTTTGTTCTGCTGAACGACGTCTTCACGGCCGCTAGTGGAGTTTACACCAAGAAGAAACTGGGGATGGAGGGTCTGGGCAAATACGGGGTTTTGTTTTATAACgcttttatcatcatcatccccACGGTCGTGGTGAGCGCTTACACCGGAGACCTGCAGAAGGCTCTGACCTTTGAAGGATGGATGTCTGTTgtgttcatatttcattttttattgtcttgTGTCATGGGgtttattttgatgtattCCATCATCCTCTGCAGTTATTATAACACAGCACTAACCACCACAGTCGTCGGGGCAGTTAAAAACGTTGCTGTGATGTATATCGGTATGTTCGTCGGCGGAGACTATGTCTTCTCGTGGACAAACTTCATAGGGCTAAATATATGCATCTCGGCGGCTCTGATTTACTCCTACATCACGTTTCACAGCAGCGCCCCGGAAGCCACCGAAGACAAGCTGAGCGTTCACGTCACAGAGAGCCTTCCGGAGAGAACGTGACGCTCCGCCGCGCTTTTACCCAGAAACCTCTCGCCGCTGGACGAGTCGGACGTTGCCTCCTTTTCCCATTGTGTGGTTTGTTTGCAATAAAACACAACTGCGACAACCAGGAA

Function

symbol description
slc35d2 Predicted to enable antiporter activity and pyrimidine nucleotide-sugar transmembrane transporter activity. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in Golgi apparatus. Orthologous to human SLC35D2 (solute carrier family 35 member D2).

NR:

description
UDP-N-acetylglucosamine/UDP-glucose/GDP-mannose transporter-like isoform X2

GO: NA

KEGG:

id description
K15281 SLC35D; solute carrier family 35

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043247950.1 True 1245 mRNA 0.51 12 558256 563214

Neighbor

gene id symbol gene type direction distance location
fbxl17 fbxl17,LOC107704582,LOC107712428,LOC107661528,LOC107737136,LOC107570989 coding downstream 25868 362578 ~ 532388 (-)
efna5b efna5,efna5b,LOC107721028,LOC107709298,LOC107692204,LOC108265807,LOC107661535,LOC100702629 coding downstream 262986 202147 ~ 295270 (-)
LOC122350625 LOC107694826,LOC107583205,LOC107757045,LOC107747425,LOC107569528,LOC107675400 coding downstream 475228 7 ~ 83028 (-)
LOC122350794 LOC107661539,LOC107704586,LOC107726870,LOC107568101,LOC107581163 coding upstream 9369 572583 ~ 576178 (-)
ubox5 NA coding upstream 17815 581029 ~ 586701 (-)
lzts3b lzts3,LOC107569677,LOC107712591,LOC107661533 coding upstream 25584 588798 ~ 601844 (-)
sprb spr,LOC107661521,LOC107569671,LOC107726883,LOC107712600,LOC107568099 coding upstream 44236 607450 ~ 610914 (-)
fabp1b.1 fabp1b.1,LOC107573351,LOC107726869,LOC107704576,LOC107579792,LOC107712467,LOC107661522,LOC103043953 coding upstream 67140 630354 ~ 631145 (-)
G59739 NA non-coding downstream 6374 514767 ~ 551882 (-)
G59750 NA non-coding downstream 10345 545919 ~ 547911 (-)
G59688 NA non-coding downstream 321599 236074 ~ 236657 (-)
G59654 NA non-coding downstream 474403 83574 ~ 83853 (-)
G60016 NA non-coding upstream 52067 615281 ~ 617472 (-)
G60036 NA non-coding upstream 97221 660435 ~ 661098 (-)
G60003 NA non-coding upstream 159976 723190 ~ 725000 (-)
G60061 NA non-coding upstream 192410 755624 ~ 756643 (-)
G60079 NA non-coding upstream 253247 816461 ~ 820768 (-)
ccl27a NA other upstream 2672 565886 ~ 570973 (-)
LOC122349987 LOC107661519,LOC107712504,LOC107726877,LOC107704593,LOC107573347,LOC794598 other upstream 159931 723145 ~ 731844 (-)
csgalnact1b LOC107712620 other upstream 169579 732793 ~ 739372 (-)
G60098 NA other upstream 572187 1135401 ~ 1138152 (-)
commd10 commd10,LOC107728250,LOC107663591 other upstream 577484 1140698 ~ 1159286 (-)

Expression


Co-expression Network