LOC122351094 (sult1st3,LOC107727994,LOC107594958,LOC107727992,LOC107687124,LOC107687147,LOC107687125)


Basic Information

Item Value
gene id LOC122351094
gene name sult1st3,LOC107727994,LOC107594958,LOC107727992,LOC107687124,LOC107687147,LOC107687125
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 23942761 ~ 23953590 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043247962.1
ATGAGCATTGCATGACTGTGTGAAAGGTAGTTTAACACGGAAGAGCTGCAAGATAACATCTGAGCGCAGAAGAGAGGAGCAAAAAATACAGGATTAAGAAAACTCACTCAAAGGAGCAACACTTTTTCATCATAATGGAAATCCATGATATGTCCTCAATGAAACTAACTAGTCGACCAGAGCTGTTTGATTTTGAGGGAATTTCTATGACCCACTACTTCACTGACAACTGGGAAAAGGTGAAAAACTTTCAGGCAAGACCTGATGACATTCTAATCGCCACTTACCCTAAAGCAGGTACCACCTGGGTTTCTTATATACTTGACCTTCTGTACTTTGGTAATGATGCTCCAGAGCGCCAGACTTCCCAGCCTATTTATATGAGAGTGCCATTCCTGGAGTCGTGTATTCAAGGGATACCATCAGGAACACAACTGGCTGATGATCTGCCCACTTCTCCTCGCCTCATCAAAACTCATTTACCTGTTCAGCTTGTGCCTAAGTCCTTCTGGGAGCAGAACTCAAGGattgtatATGTAGCACGGAATGCGAAAGACAATGCAGTTtcctattttcattttgatcgAATGAATATGGGAGAACCTGAACCAGGAGATTGGAACACATTCTTTCAGACATTTATGGAGGGAAAGAGAGTATTCGGTCCTTGGTATGACCATGTCAGTGGATGGTGGCAGAAAAAGCAAACATATTCTAACCTACTGTATATGTTCTTTGAGGATATGGTTGAGGACACAGGCCGTGAGGTGGCGCATTTGTGTTCCTTCTTGGGTTTGTCCACTTCAGCTGAACAGAAGGAGAAAATAACAAAAGGGGTTCAGTTTGATGCCATGAAACATAACAAGATGACAAACTATTCTACAATCCCAGTCATGGACTTCAAGATCTCACCCTTCATGAGGAAAGgtAAAGTTGGAGACTGGAAAAACCATTTCACTGTGGCACAAAATGAACAGTTTGATGAGGTCTACAAACAGAAGATGAAGAACACCACTGTCAAGTTCCGCACTGAGATATAAAACTACAGTTCTGTATATTTACCCAGCATAAGagtttaatgataaataaataatcaaatggctaacaaaacttttgaaaatctacatatttaatttgacagaTGGTTTACAATgattaaaagactttttttttaaatactaagaAACGTAATTTAACTTCAGTTCATATCAGTTTACACagtgcattttttgtttaattgtttgttcttgttttacatttacaaatgtggAAAAAAGTTGAATCAGTAATATTAAGCACTTTACacaatattcattttaacacattattcacattttgtttgttgtgCTGTCAATGCAGACTTCTGCTATTTAAACACACTAACAAATCATTTATTGATTGTTTGtccattttttcatgtttttgcagtacTCAATTATTGAAATTACTTATCATTTGTAAAAGTTATAAATGTTTGCGAATCATTCTGTGCCTTTATGGACATTTGACTTTTAGCTACTGTAACAACATTTGTGTTTAggtaaaaacatgataacaca

Function

symbol description
sult1st3 Enables sulfotransferase activity. Involved in xenobiotic metabolic process. Predicted to be active in cytoplasm. Human ortholog(s) of this gene implicated in several diseases, including breast cancer; gastrointestinal system cancer (multiple); lung cancer (multiple); reproductive organ cancer (multiple); and urinary bladder cancer. Orthologous to human SULT1A1 (sulfotransferase family 1A member 1).

NR:

description
PREDICTED: cytosolic sulfotransferase 3-like

GO:

id name namespace
GO:0008210 estrogen metabolic process biological_process
GO:0006805 xenobiotic metabolic process biological_process
GO:0006584 catecholamine metabolic process biological_process
GO:0005737 cytoplasm cellular_component
GO:0004304 estrone sulfotransferase activity molecular_function

KEGG:

id description
K01014 SULT1A; aryl sulfotransferase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043247962.1 True 1559 mRNA 0.37 8 23942761 23953590

Neighbor

gene id symbol gene type direction distance location
LOC122350978 gpr153,LOC107687122,LOC107693426 coding upstream 42686 23871236 ~ 23900075 (+)
LOC122350042 acot7 coding upstream 77846 23828666 ~ 23864915 (+)
hes2.2 LOC107595804,LOC107748990,LOC107687144,LOC107734829 coding upstream 190330 23750246 ~ 23752431 (+)
hes2.1 hes2.1,LOC107748974,LOC107687139,LOC107577158 coding upstream 201530 23740350 ~ 23741231 (+)
ybx1 ybx1,LOC107595774,LOC107748958,LOC107693424,LOC107602459 coding upstream 278327 23658081 ~ 23664434 (+)
LOC122350539 sult1st3,LOC107727992,LOC107687125,LOC107687124,LOC107594958,LOC107738928,LOC107727989 coding downstream 2458 23956048 ~ 23963140 (+)
LOC122350362 LOC107687124,LOC107727989,LOC107594958,LOC107727992,LOC107687125 coding downstream 13935 23967525 ~ 23972075 (+)
qars1 qars,LOC107727984,LOC107738933 coding downstream 41347 23994937 ~ 24007734 (+)
mtor mtor,LOC107564227,LOC107727986,LOC107594963 coding downstream 60557 24014147 ~ 24113382 (+)
LOC122350145 NA non-coding upstream 260929 23676434 ~ 23681832 (+)
G66418 LOC107748960,LOC107687117,LOC107691060,LOC107595771,LOC107602461,LOC107755278 non-coding upstream 319290 23620927 ~ 23623471 (+)
G66416 NA non-coding upstream 326079 23615216 ~ 23616682 (+)
G66351 NA non-coding upstream 507728 23434118 ~ 23435033 (+)
G66350 NA non-coding upstream 509016 23432809 ~ 23433745 (+)
acot7 acot7,LOC107754737,LOC107687121,LOC107693425 other upstream 138712 23752568 ~ 23804049 (+)
ndufa7 ndufa7,LOC107748992,LOC107755274 other upstream 308696 23632350 ~ 23634065 (+)
LOC122350936 LOC107710771,LOC106926566,LOC107691064 other upstream 532200 23403713 ~ 23410561 (+)
prdm16 prdm16,si:ch211-263k4.2 other upstream 541199 23054616 ~ 23401562 (+)
mfn2 mfn2,LOC107748965,LOC107602467,LOC107710790,LOC107678429,LOC107698839,LOC107595787 other upstream 955599 22973995 ~ 22987162 (+)

Expression


Co-expression Network