LOC122351102 (LOC107755287,LOC107758020,LOC107665055,LOC107549659)


Basic Information

Item Value
gene id LOC122351102
gene name LOC107755287,LOC107758020,LOC107665055,LOC107549659
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 6679661 ~ 6690661 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043247975.1
CGGAAATGACGTCACTGTCTCGCGACAAGCGTGCACCTAGAGGACGCCGAGCAGGGCATGGAACACATCGGTGCTTTACTACTGCTGTGGACGTGTGTGTCACGTTTACATCCAACAGAAGGTTTTCCAAGGTGCAGCACGGAGCAGTTTGTGTGTAATAACGGCAGATGTGTGCCTCTGAGTCTTCACTGCGACAGTGTGGATGACTGTGGAGACAGCAGCGATGAGATCTCCTGTTTGAATTGCACTGGTGGTTCCTTCCACTGTGTGGCAGCAGCACGCTGCGTTTCCTCCCACAGTGTCTGCGACGGCAAGCCTGACTGCTCTGATGGAGCAGATGAACTGTTAGACTCATGCTCACAAGCATGCACTAGGTCACAGTTCCGGTGCACAAATGGACGCTGCGTGCCCAATTCAGGGAGGTGTGACAACATCAAAGACTGTGAAGATGGCAGTGATGAAGAGAACTGtgATGACAATGAATGTGAGATCAATAACGGTGGCTGTTCTCATCGGTGTATTGATCTGCCTCTTGGTTTCATGTGCGACTGTCCTAGTGAAATGAGGCTGGTTCTTGACACACACTGTCAGGATGTGGACCACTGTCTTGATTCAGATGTGTGTGATCAAATTTGTGTCCATAACAATGGATCTCTTGCGTGTGAATGTGAGGAAGGGTATGTGCTGACCGCCGGGACTGGAGAGTGCAAGTCTACCGGTGTTGCTGCTCGTGTGGTGGTCAGCACTCTCGAAGGTGTTAAATGGATGGACCTCAGCGGTTCTGAGCAAGGAAACGTCACACATATAAGAGCCCCACCAGGACCCGTTTCTGCCCTTAATGCAAATAACACGTTATACTGGATCATTCCTGAGAATGACATCATCTACAGGATGCCTTTAGACTCCAGTGACTTTAGACCAGCTGTGTTGTTAAAGGCCTCCACAGGCATTCTAGGATTAGCAGTGGACTGGATCCATGAGCTTCTGTACTGGGTCAGTACCAGTACTCATGCTTTACACGTGGCCTCTCTGAATGGCTCCACACAAAGTGAGCTCATCTCTGGGCTCTCCAGACCTACTGCAGTTGCTGTCCATCCGATGCTAGGGTACGTGTTCTGGGCAGATAGTGCAGCGCTTCCCAAAATTGAGCGTGCCAGTTTGGATGGGACAAGCAGAATAGCGCTGATAACTTCATCAATACGTGATCCTGTCGCCATCTCTTTGGatATCCCTCGTGGTCTGCTGTATTGGGCTGACTCTGGTCTGCGCATAATATCAAGAGTTGCATTTGATGGGCAGCATAGAAAGACAATTGTAGAGTCCAACGGGTATCTAGATCGACCGTTTGGACTGGCCATATTTGAGAGTCGAGTGTACTGGAGTGACCAGGTGACCAACTCTATTTGTAGTGCTGACAAACACAATGGCAACATGCTCCAGGTTTCTCAGAGACTGGGTTCTGTTTCACCAGCTGGACTGGTCATCCTTCACCCACTGTTACAGGCTGCAGgcAATGATGTGTTGCAGTCTGAAACAAGAAAAACTTTTCCAGTTTCACAATTTGCTTGGCTCCTCTCACTCACTGTCATCGTCAGTTTGCTGTTAGTGGGGGCGGTGATATGGCAGCAGAGGTCTGAATTCTGTGCCCCTCGTTCTATGTCTCATCTTGGAGACGAGACACTTAAAGAATCCCAGGATCCTCTTCTGTTATCCAGACTGCCTGTAATACATGAGAATAAAGATGGCACACAGAATGGTGCAACGCACTGCCATGGACATGGGGTTTTCCTGTAAAAGGACCTCTGTGTTTCCTGTGATGGAAATTACCACCCCCATTTCCTGTTGTCAACTGAAGCGAGGCAGACAATCATCCTACTTGCAGACACATCctactgcagaaaaaaaacgctCTTAAATGCTTTCCAGATGTCTGTTTATGATTTGATAATCACAGAACTAGTCAAATTAAGCATTCAGTGAACTCTTTTAGTTCTTTAATAGAATTGTATCGGCCTGAATACCTTTTCATTTTACTCTTTAAATCTGGGCGTTCCACTTTGACACAGAACAACAAaatgtcatcatcatcattgtgTTGTGAGTTCCAGGTCAATAAATAATTGACCGTGTTATATGGTATTAACTGTGCTGTTAGTCATTACATGACATTTCTGACTTTCAAGCTCGTTTTAAGGTGATGGGATAAGTGGCAAATGTCCATTCACTGTCGAATTTATAGATGCACAAGTTGACCAATCGTGTcttttgtatgtgtgcataGAGACAAAATCAGTGTggaacatattttatttagagaTTGACGGGTGCTGTTAATGCTTTAGAGCAGGGGTGTCAAATTCAGTTCCTGGTTGGCCGCAGCACTTAAGAGTTTTGCTCCAACACAAAACCTGAGAACATGATCATCTCGATAGGGTGTGTTTAAGCAGGCTTGACTTTGGCCATCCAGAAATGGAAGTCTGATAATCCCTGCTTTAGACTAAATTAAGAGTTATTTATGTAAGCAGAGAAAACAATGCTATttattcattgtgtgtgtggttcGGATCACTTTCCAGTTCTCTTTACGTTGCAGTGTTGAAACTGTAAAACAGGTTTTTGCTGTCCTTTATGATTGTatatagtttgaaaaaaaaaaaatgggttgaATGCTTTTAATGACTCATGGTAAAGGGCTTGATGGAATAAAATGCAAGTTGGAAATTG
>XM_043247976.1
CGGAAATGACGTCACTGTCTCGCGACAAGCGTGCACCTAGAGGACGCCGAGCAGGGCATGGAACACATCGGTGCTTTACTACTGCTGTGGACGTGTGTGTCACGTTTACATCCAACAGAAGGTTTTCCAAGGTGCAGCACGGAGCAGTTTGTGTGTAATAACGGCAGATGTGTGCCTCTGAGTCTTCACTGCGACAGTGTGGATGACTGTGGAGACAGCAGCGATGAGATCTCCTGTTTGAATTGCACTGGTGGTTCCTTCCACTGTGTGGCAGCAGCACGCTGCGTTTCCTCCCACAGTGTCTGCGACGGCAAGCCTGACTGCTCTGATGGAGCAGATGAACTGTTAGACTCATGCTCACAAGCATGCACTAGGTCACAGTTCCGGTGCACAAATGGACGCTGCGTGCCCAATTCAGGGAGGTGTGACAACATCAAAGACTGTGAAGATGGCAGTGATGAAGAGAACTGtgATGACAATGAATGTGAGATCAATAACGGTGGCTGTTCTCATCGGTGTATTGATCTGCCTCTTGGTTTCATGTGCGACTGTCCTAGTGAAATGAGGCTGGTTCTTGACACACACTGTCAGGATGTGGACCACTGTCTTGATTCAGATGTGTGTGATCAAATTTGTGTCCATAACAATGGATCTCTTGCGTGTGAATGTGAGGAAGGGTATGTGCTGACCGCCGGGACTGGAGAGTGCAAGTCTACCGGTGTTGCTGCTCGTGTGGTGGTCAGCACTCTCGAAGGTGTTAAATGGATGGACCTCAGCGGTTCTGAGCAAGGAAACGTCACACATATAAGAGCCCCACCAGGACCCGTTTCTGCCCTTAATGCAAATAACACGTTATACTGGATCATTCCTGAGAATGACATCATCTACAGGATGCCTTTAGACTCCAGTGACTTTAGACCAGCTGTGTTGTTAAAGGCCTCCACAGGCATTCTAGGATTAGCAGTGGACTGGATCCATGAGCTTCTGTACTGGGTCAGTACCAGTACTCATGCTTTACACGTGGCCTCTCTGAATGGCTCCACACAAAGTGAGCTCATCTCTGGGCTCTCCAGACCTACTGCAGTTGCTGTCCATCCGATGCTAGGGTACGTGTTCTGGGCAGATAGTGCAGCGCTTCCCAAAATTGAGCGTGCCAGTTTGGATGGGACAAGCAGAATAGCGCTGATAACTTCATCAATACGTGATCCTGTCGCCATCTCTTTGGatATCCCTCGTGGTCTGCTGTATTGGGCTGACTCTGGTCTGCGCATAATATCAAGAGTTGCATTTGATGGGCAGCATAGAAAGACAATTGTAGAGTCCAACGGGTATCTAGATCGACCGTTTGGACTGGCCATATTTGAGAGTCGAGTGTACTGGAGTGACCAGGTGACCAACTCTATTTGTAGTGCTGACAAACACAATGGCAACATGCTCCAGGTTTCTCAGAGACTGGGTTCTGTTTCACCAGCTGGACTGGTCATCCTTCACCCACTGTTACAGGCTGCAGgcAATGATGTGTTGCAGTCTGAAACAAGAAAAACTTTTCCAGTTTCACAATTTGCTTGGCTCCTCTCACTCACTGTCATCGTCAGTTTGCTGTTAGTGGGGGCGGTGATATGGCAGCAGAGGTCTGAATTCTGTGCCCCTCGTTCTATGTCTCATCTTGGAGACGAGACACTTAAAGAATCCCAGGATCCTCTTCTGTTATCCAGACTGCCTGTAATACATGAGAATAAATTTCCTGATATTTTCAAAGTGCCATAGACGATTGCTTGTGTTTTCAGGATGGCACACAGAATGGTGCAACGCACTGCCATGGACATGGGGTTTTCCTGTAAAAGGACCTCTGTGTTTCCTGTGATGGAAATTACCACCCCCATTTCCTGTTGTCAACTGAAGCGAGGCAGACAATCATCCTACTTGCAGACACATCctactgcagaaaaaaaacgctCTTAAATGCTTTCCAGATGTCTGTTTATGATTTGATAATCACAGAACTAGTCAAATTAAGCATTCAGTGAACTCTTTTAGTTCTTTAATAGAATTGTATCGGCCTGAATACCTTTTCATTTTACTCTTTAAATCTGGGCGTTCCACTTTGACACAGAACAACAAaatgtcatcatcatcattgtgTTGTGAGTTCCAGGTCAATAAATAATTGACCGTGTTATATGGTATTAACTGTGCTGTTAGTCATTACATGACATTTCTGACTTTCAAGCTCGTTTTAAGGTGATGGGATAAGTGGCAAATGTCCATTCACTGTCGAATTTATAGATGCACAAGTTGACCAATCGTGTcttttgtatgtgtgcataGAGACAAAATCAGTGTggaacatattttatttagagaTTGACGGGTGCTGTTAATGCTTTAGAGCAGGGGTGTCAAATTCAGTTCCTGGTTGGCCGCAGCACTTAAGAGTTTTGCTCCAACACAAAACCTGAGAACATGATCATCTCGATAGGGTGTGTTTAAGCAGGCTTGACTTTGGCCATCCAGAAATGGAAGTCTGATAATCCCTGCTTTAGACTAAATTAAGAGTTATTTATGTAAGCAGAGAAAACAATGCTATttattcattgtgtgtgtggttcGGATCACTTTCCAGTTCTCTTTACGTTGCAGTGTTGAAACTGTAAAACAGGTTTTTGCTGTCCTTTATGATTGTatatagtttgaaaaaaaaaaaatgggttgaATGCTTTTAATGACTCATGGTAAAGGGCTTGATGGAATAAAATGCAAGTTGGAAATTG

Function

NR:

description
PREDICTED: very low-density lipoprotein receptor-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043247975.1 False 2724 mRNA 0.45 12 6679661 6690661
XM_043247976.1 True 2771 mRNA 0.45 12 6679661 6690661

Neighbor

gene id symbol gene type direction distance location
b3gnt3.4 b3gnt3,LOC107665060,LOC107599054,LOC107755313 coding downstream 1508 6670280 ~ 6678153 (-)
ccdc124 ccdc124,LOC107557177 coding downstream 36338 6636743 ~ 6643323 (-)
kcnn1b kcnn1,kcnn1b,LOC107557189,LOC107758025,LOC107598990,LOC107665010 coding downstream 43584 6603068 ~ 6636077 (-)
si:ch73-61d6.3 si:ch73-61d6.3,LOC107725329,LOC107665009,LOC107758028,LOC107699027,LOC107598988 coding downstream 82086 6587209 ~ 6597575 (-)
zgc:194990 zgc:194990,LOC107699042,LOC107557196,LOC107758027 coding downstream 92580 6576325 ~ 6587081 (-)
cabp4 LOC107598993,LOC107665077,LOC107755310,LOC107603028,LOC107699144 coding upstream 13387 6704048 ~ 6709965 (-)
serping1 LOC107665067 coding upstream 67543 6758204 ~ 6764605 (-)
igf3 LOC107755307,LOC107598996,LOC107665064 coding upstream 76305 6766966 ~ 6770484 (-)
si:dkeyp-110g5.4 LOC107665063,LOC107755306,LOC107599055 coding upstream 80511 6771172 ~ 6774736 (-)
atp2b3a atp2b3a,LOC107755305,LOC107758015,LOC107699155,LOC107603076,LOC107665062 coding upstream 84213 6774874 ~ 6801595 (-)
G61663 NA non-coding downstream 21377 6657498 ~ 6658284 (-)
G61640 NA non-coding downstream 117743 6561450 ~ 6561918 (-)
G61629 NA non-coding downstream 127950 6551404 ~ 6551711 (-)
G61582 NA non-coding downstream 211245 6467953 ~ 6468416 (-)
LOC122350799 LOC107725298,LOC107598986 non-coding downstream 404451 6273884 ~ 6275210 (-)
G61782 NA non-coding upstream 171367 6862028 ~ 6862954 (-)
G61860 cacna1e,LOC107707593,LOC107657843,LOC107599003 non-coding upstream 583929 7274590 ~ 7281165 (-)
G61865 NA non-coding upstream 615451 7306112 ~ 7308340 (-)
LOC122350886 NA non-coding upstream 687094 7377755 ~ 7378459 (-)
LOC122350888 NA non-coding upstream 699627 7390288 ~ 7394209 (-)
LOC122350671 fibcd1,LOC107739453,LOC108428067,LOC102776889,LOC107596897,LOC107700935,LOC105015243,LOC106936583 other downstream 236679 6423742 ~ 6442982 (-)
LOC122350596 LOC107557202,LOC107757303,LOC107725315,LOC107674335 other downstream 718555 5919961 ~ 5961106 (-)
G61513 NA other downstream 1061997 5614329 ~ 5617664 (-)
c8h9orf116 LOC107757294 other downstream 1070089 5605172 ~ 5609572 (-)
pip5k1bb pip5k1bb,LOC107664977,LOC105901155,LOC107566804,LOC108412809,LOC108265367,LOC108234418 other downstream 1168718 5476213 ~ 5510943 (-)
LOC122350104 LOC107755295,LOC107665061,LOC107598999 other upstream 123810 6814471 ~ 6816747 (-)
xpr1a xpr1a,LOC107758009,LOC107755298,LOC107699288,LOC107665065,LOC107603171,LOC107599040 other upstream 184688 6875349 ~ 7056429 (-)
lhx4 lhx4,LOC107699337,LOC107550233,LOC107758007,LOC107599001,LOC107755297,LOC107665078 other upstream 400789 7091450 ~ 7102993 (-)
spata6 LOC107657881,LOC107699473,LOC107549716,LOC107757996,LOC107599047 other upstream 986835 7677496 ~ 7687562 (-)
LOC122350139 elavl4 other upstream 1426347 8117008 ~ 8232774 (-)

Expression


Co-expression Network