rmi1 (rmi1)


Basic Information

Item Value
gene id rmi1
gene name rmi1
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 22366400 ~ 22370617 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043247981.1
CTTTTTTATGATTAGCTAACGCGGCCGCTGTCTTTTTAGATACGAGGTGATCGTGATGTGGATTTTTGCAAGTTATGAAGTATCAAAAAAGTGAATTAGCCGCCGGTAAGGAGTCACAGGTCAGTAAGGAGTCACACGCAGACTTTTAGTGTAGGTTATGGCACTGAAACTCTCACTAAAACGAAGTGGCGTTCTCAAACCAGACGCCATACAGCCTGCCTGTGGTATGATTGTCAGTTGAAGCTGCAGCGTTGGGGACAGTGAGAGGATGTCAGTGGGTGAAGTCCAGGTTACCCAGGCATGGCTGCGTTCTCAATGGCACATCCAGGTCCCTCATGCCTGGCTGGACGCTTGCGTGAACTGGATAAAGGAGGAAGCGGAAAGCGAAGCCGTGCCTCAGATGCTGCTGAATCAGCGCGTCCTGGAGCAATGGCTGCTGACTGACCTGCGAGATCTTTCCCACCCGGTGCTCCCTGAAAGAATATCCGAGGCACAGAAAACCGAACTAAGTACCTGTTTCTGCCTTCAGATGGACTCCCTGCTAGACGTCAGCCAGCCTGCCTACACTCAGCTGCAGCGTATTCGGGGCACCGACTGCTCCAATGATCAAGTCTCGGCGGTCACACAGGAAACTCAGCGGCCGTGGGAGGCCAAGCCCACACGTATGTTGATGTTGCAGCTCACGGATGGAGTGCAGAGCCTGGAGGGTATGGAATACCGGCCCATCCCAGCTTTAAGCACCAACTTGGCGCCTGGGACCAAGATACAGCTAGTCGGTCCCATTGCCGTCCGTCTGGGGGTGCTGCTCCTGAAAGCAGAGAATGTGAAGGTGTTGGGTGGGGAGGTGGAACAACTTTTGGAGCTTTACTCTCAAAGCAGAGTGCTTTGCGGGACACTCGGTTTGCCTGAGGAGAGCCATCCACAAGCTGAGGAACCGGATGACCTGGAGCTCCTGGCCAGTGTAGAGGCTCCAGCAGAGCTTCAGGTAGCTGACAGCGGCTATGACAGCATGGCTTCAGACACTTACTTCAGACCAGCTTGGCCCCAGCCTCGTCTTCAAGCGGCACCCAATCTCAGAGAAGACGACTGGGACATGGACGAAATTCCAGATGACGACTTCAGGAGTATTCCAGACGATTTTGACCACGTTCCACAAAATGTGGAGGACGATGCTCCTGAGGACTTTGATGACATCCCGTTAGAAGAGCTGGAGAGCGTCATGAGCCCAATAGATTGCAAACCCAATGCAATCCAGTCCAGAGTCGAAGAGCCAAGCCTTTCACGTTTTCGGACTACTCTCAGAGTTAGTGACGCATTTGTTGCTGGATCCTCCGCAAACGCAGTTGAGGAACCTGAAGCAAACTTATCTAACCAACCTAAAACTGAAGAACCAAGCCAGACCTTTCGCTCTAAAACTCTGCTTGGCACCACCAGCCAAGGCAGAATCTTCAATGAAGTTCCTCACACATCCATGTCAAGTTCCTCTACAAACACCGCTGGCTCTCTTGCTTACCTACCTGCTCCACCATACCTCTGCGTGCTACAGGCTGGCCACTGGTCGCCCGCCGGAGTTCGAGTTTTACAGCTGCAAGCTTTCATCGTTACACTCAAAGGAAATCTGCGCAGTAGTAGTGGCGCGTGGAAACTCGAGGCCACTATATCGGACGGATCCGGGTACTTGGATGTGGATCTGTCAGACGCCATGCTCACTGAACTCATCGGCTACACCGCAGCAGAGGCTCGAGTGCTGCGGAAAGACCCGTCGAGGCGCGCTGAGGTGGACCGAGGGATTCTGCACTGTCAGAGAGAGCTGGTGGATATGTGCTGCATGATGAGCGTACAGGTGGATGAGACGGGCAGAGGAGCTGTGCTCCGTGTCAGTCCGCTCTCCGACAAGGACTGCTCCGAGATACAgaaaagagtgaaagagaggaGGAACTAAACCCTGCTTATTCTCTGGACTCTCTGTAAGCCTAATCTGACAGTGTTTGTGTAGAATCACTCAGTGctttcttttgatattttagtgATTCGCTTTGGTTCACACAGACTGAAGAAAACCGCTTTTAATGCACTTCACTCACATCTGTTGCAGAATCCACCGTGATCCGtttttgtaaatagtttttcGTTCGATTTTTGCTGTCTTTTGAATGTgattgaataaattaacaaaGATCGTTTAAA
>XM_043247982.1
TTTTATGATTAGCTAACGCGGCCGCTGTCTTTTTAGATACGAGGTGATCGTGATGTGGATTTTTGCAAGTTATGAAGTATCAAAAAAGTGAATTAGCCGCCGGTAAGGAGTCACAGGTCAGTAAGGAGTCACACGCAGACTTTTAGTGTAGGTTATGGCACTGAAACTCTCACTAAAACGAAGTGGCGTTCTCAAACCAGACGCCATACAGCCTGCCTGTGGTATGATTGTCAGGTAAGTTGAAGCTGCAGCGTTGGGGACAGTGAGAGGATGTCAGTGGGTGAAGTCCAGGTTACCCAGGCATGGCTGCGTTCTCAATGGCACATCCAGGTCCCTCATGCCTGGCTGGACGCTTGCGTGAACTGGATAAAGGAGGAAGCGGAAAGCGAAGCCGTGCCTCAGATGCTGCTGAATCAGCGCGTCCTGGAGCAATGGCTGCTGACTGACCTGCGAGATCTTTCCCACCCGGTGCTCCCTGAAAGAATATCCGAGGCACAGAAAACCGAACTAAGTACCTGTTTCTGCCTTCAGATGGACTCCCTGCTAGACGTCAGCCAGCCTGCCTACACTCAGCTGCAGCGTATTCGGGGCACCGACTGCTCCAATGATCAAGTCTCGGCGGTCACACAGGAAACTCAGCGGCCGTGGGAGGCCAAGCCCACACGTATGTTGATGTTGCAGCTCACGGATGGAGTGCAGAGCCTGGAGGGTATGGAATACCGGCCCATCCCAGCTTTAAGCACCAACTTGGCGCCTGGGACCAAGATACAGCTAGTCGGTCCCATTGCCGTCCGTCTGGGGGTGCTGCTCCTGAAAGCAGAGAATGTGAAGGTGTTGGGTGGGGAGGTGGAACAACTTTTGGAGCTTTACTCTCAAAGCAGAGTGCTTTGCGGGACACTCGGTTTGCCTGAGGAGAGCCATCCACAAGCTGAGGAACCGGATGACCTGGAGCTCCTGGCCAGTGTAGAGGCTCCAGCAGAGCTTCAGGTAGCTGACAGCGGCTATGACAGCATGGCTTCAGACACTTACTTCAGACCAGCTTGGCCCCAGCCTCGTCTTCAAGCGGCACCCAATCTCAGAGAAGACGACTGGGACATGGACGAAATTCCAGATGACGACTTCAGGAGTATTCCAGACGATTTTGACCACGTTCCACAAAATGTGGAGGACGATGCTCCTGAGGACTTTGATGACATCCCGTTAGAAGAGCTGGAGAGCGTCATGAGCCCAATAGATTGCAAACCCAATGCAATCCAGTCCAGAGTCGAAGAGCCAAGCCTTTCACGTTTTCGGACTACTCTCAGAGTTAGTGACGCATTTGTTGCTGGATCCTCCGCAAACGCAGTTGAGGAACCTGAAGCAAACTTATCTAACCAACCTAAAACTGAAGAACCAAGCCAGACCTTTCGCTCTAAAACTCTGCTTGGCACCACCAGCCAAGGCAGAATCTTCAATGAAGTTCCTCACACATCCATGTCAAGTTCCTCTACAAACACCGCTGGCTCTCTTGCTTACCTACCTGCTCCACCATACCTCTGCGTGCTACAGGCTGGCCACTGGTCGCCCGCCGGAGTTCGAGTTTTACAGCTGCAAGCTTTCATCGTTACACTCAAAGGAAATCTGCGCAGTAGTAGTGGCGCGTGGAAACTCGAGGCCACTATATCGGACGGATCCGGGTACTTGGATGTGGATCTGTCAGACGCCATGCTCACTGAACTCATCGGCTACACCGCAGCAGAGGCTCGAGTGCTGCGGAAAGACCCGTCGAGGCGCGCTGAGGTGGACCGAGGGATTCTGCACTGTCAGAGAGAGCTGGTGGATATGTGCTGCATGATGAGCGTACAGGTGGATGAGACGGGCAGAGGAGCTGTGCTCCGTGTCAGTCCGCTCTCCGACAAGGACTGCTCCGAGATACAgaaaagagtgaaagagaggaGGAACTAAACCCTGCTTATTCTCTGGACTCTCTGTAAGCCTAATCTGACAGTGTTTGTGTAGAATCACTCAGTGctttcttttgatattttagtgATTCGCTTTGGTTCACACAGACTGAAGAAAACCGCTTTTAATGCACTTCACTCACATCTGTTGCAGAATCCACCGTGATCCGtttttgtaaatagtttttcGTTCGATTTTTGCTGTCTTTTGAATGTgattgaataaattaacaaaGATCGTTTAAA
>XM_043247983.1
TTTTATGATTAGCTAACGCGGCCGCTGTCTTTTTAGATACGAGGTGATCGTGATGTGGATTTTTGCAAGTTATGAAGTATCAAAAAAGTGAATTAGCCGCCGGTAAGGAGTCACAGTTGAAGCTGCAGCGTTGGGGACAGTGAGAGGATGTCAGTGGGTGAAGTCCAGGTTACCCAGGCATGGCTGCGTTCTCAATGGCACATCCAGGTCCCTCATGCCTGGCTGGACGCTTGCGTGAACTGGATAAAGGAGGAAGCGGAAAGCGAAGCCGTGCCTCAGATGCTGCTGAATCAGCGCGTCCTGGAGCAATGGCTGCTGACTGACCTGCGAGATCTTTCCCACCCGGTGCTCCCTGAAAGAATATCCGAGGCACAGAAAACCGAACTAAGTACCTGTTTCTGCCTTCAGATGGACTCCCTGCTAGACGTCAGCCAGCCTGCCTACACTCAGCTGCAGCGTATTCGGGGCACCGACTGCTCCAATGATCAAGTCTCGGCGGTCACACAGGAAACTCAGCGGCCGTGGGAGGCCAAGCCCACACGTATGTTGATGTTGCAGCTCACGGATGGAGTGCAGAGCCTGGAGGGTATGGAATACCGGCCCATCCCAGCTTTAAGCACCAACTTGGCGCCTGGGACCAAGATACAGCTAGTCGGTCCCATTGCCGTCCGTCTGGGGGTGCTGCTCCTGAAAGCAGAGAATGTGAAGGTGTTGGGTGGGGAGGTGGAACAACTTTTGGAGCTTTACTCTCAAAGCAGAGTGCTTTGCGGGACACTCGGTTTGCCTGAGGAGAGCCATCCACAAGCTGAGGAACCGGATGACCTGGAGCTCCTGGCCAGTGTAGAGGCTCCAGCAGAGCTTCAGGTAGCTGACAGCGGCTATGACAGCATGGCTTCAGACACTTACTTCAGACCAGCTTGGCCCCAGCCTCGTCTTCAAGCGGCACCCAATCTCAGAGAAGACGACTGGGACATGGACGAAATTCCAGATGACGACTTCAGGAGTATTCCAGACGATTTTGACCACGTTCCACAAAATGTGGAGGACGATGCTCCTGAGGACTTTGATGACATCCCGTTAGAAGAGCTGGAGAGCGTCATGAGCCCAATAGATTGCAAACCCAATGCAATCCAGTCCAGAGTCGAAGAGCCAAGCCTTTCACGTTTTCGGACTACTCTCAGAGTTAGTGACGCATTTGTTGCTGGATCCTCCGCAAACGCAGTTGAGGAACCTGAAGCAAACTTATCTAACCAACCTAAAACTGAAGAACCAAGCCAGACCTTTCGCTCTAAAACTCTGCTTGGCACCACCAGCCAAGGCAGAATCTTCAATGAAGTTCCTCACACATCCATGTCAAGTTCCTCTACAAACACCGCTGGCTCTCTTGCTTACCTACCTGCTCCACCATACCTCTGCGTGCTACAGGCTGGCCACTGGTCGCCCGCCGGAGTTCGAGTTTTACAGCTGCAAGCTTTCATCGTTACACTCAAAGGAAATCTGCGCAGTAGTAGTGGCGCGTGGAAACTCGAGGCCACTATATCGGACGGATCCGGGTACTTGGATGTGGATCTGTCAGACGCCATGCTCACTGAACTCATCGGCTACACCGCAGCAGAGGCTCGAGTGCTGCGGAAAGACCCGTCGAGGCGCGCTGAGGTGGACCGAGGGATTCTGCACTGTCAGAGAGAGCTGGTGGATATGTGCTGCATGATGAGCGTACAGGTGGATGAGACGGGCAGAGGAGCTGTGCTCCGTGTCAGTCCGCTCTCCGACAAGGACTGCTCCGAGATACAgaaaagagtgaaagagaggaGGAACTAAACCCTGCTTATTCTCTGGACTCTCTGTAAGCCTAATCTGACAGTGTTTGTGTAGAATCACTCAGTGctttcttttgatattttagtgATTCGCTTTGGTTCACACAGACTGAAGAAAACCGCTTTTAATGCACTTCACTCACATCTGTTGCAGAATCCACCGTGATCCGtttttgtaaatagtttttcGTTCGATTTTTGCTGTCTTTTGAATGTgattgaataaattaacaaaGATCGTTTAAA

Function

symbol description
rmi1 Predicted to enable nucleotide binding activity. Predicted to be involved in double-strand break repair via homologous recombination and resolution of meiotic recombination intermediates. Predicted to act upstream of or within DNA replication. Predicted to be located in nucleus. Predicted to be part of RecQ family helicase-topoisomerase III complex. Predicted to be active in nuclear body. Orthologous to human RMI1 (RecQ mediated genome instability 1).

NR:

description
recQ-mediated genome instability protein 1

GO: NA

KEGG:

id description
K10990 RMI1, BRAP75; RecQ-mediated genome instability protein 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043247981.1 False 2187 mRNA 0.51 2 22366400 22370617
XM_043247982.1 True 2189 mRNA 0.51 2 22366400 22370614
XM_043247983.1 False 2066 mRNA 0.52 2 22366400 22370614

Neighbor

gene id symbol gene type direction distance location
ntrk2a ntrk2,ntrk2a,LOC107752549,LOC107757434,LOC107678451 coding downstream 1577 22324786 ~ 22364823 (-)
naa35 naa35,LOC107757435,LOC107752550 coding downstream 75553 22283349 ~ 22290847 (-)
LOC122349876 NA coding downstream 204842 22159986 ~ 22161558 (-)
LOC122349886 NA coding downstream 219403 22145523 ~ 22146997 (-)
LOC122350992 LOC107756834,LOC107691567,LOC107548280,LOC107702864 coding downstream 312025 22040071 ~ 22054375 (-)
rasef rasef,LOC107678388,LOC107752555,LOC107755592,LOC107562642 coding upstream 67853 22438470 ~ 22457269 (-)
LOC122349924 nfu1,LOC107664472,LOC107678441,LOC107553147,LOC107570003,LOC101170349 coding upstream 141335 22511952 ~ 22515035 (-)
LOC122350076 LOC107748967,LOC107595759,LOC107698846,LOC107678416,LOC107602469,LOC107710786 coding upstream 254806 22625423 ~ 22628559 (-)
LOC122350258 LOC107757082,LOC107757083,LOC107752574,LOC107757080,LOC107678397,LOC107575601,LOC107703982,LOC107752571 coding upstream 377928 22748545 ~ 22756185 (-)
LOC122351034 LOC107552255 coding upstream 387159 22757776 ~ 22760114 (-)
G66142 NA non-coding downstream 718 22365276 ~ 22365682 (-)
G66143 NA non-coding downstream 1287 22364901 ~ 22365113 (-)
G66131 NA non-coding downstream 70447 22293439 ~ 22295953 (-)
LOC122350974 NA non-coding downstream 291929 22073687 ~ 22074471 (-)
G66115 NA non-coding downstream 352722 22010643 ~ 22013678 (-)
G66147 NA non-coding upstream 6293 22376910 ~ 22378639 (-)
G66163 gkap1,LOC107562640,LOC107757429,LOC107664507,LOC107678454,LOC107553117 non-coding upstream 15465 22386082 ~ 22387783 (-)
G66206 NA non-coding upstream 177034 22547651 ~ 22549318 (-)
G66207 NA non-coding upstream 209785 22580402 ~ 22625177 (-)
G66217 LOC107664463,LOC107755600 non-coding upstream 284354 22654971 ~ 22657659 (-)
gfpt1 gfpt1,LOC107678434,LOC107553119,LOC108426669,LOC107710818,LOC107752562,LOC103362312,LOC101170101,LOC107562636 other downstream 100539 22243202 ~ 22265861 (-)
antxr1a antxrl,antxr1a,antxr1,LOC107661337,LOC107710819,LOC107562635,LOC108265351 other downstream 256313 22075010 ~ 22110087 (-)
LOC122350973 dmtn,LOC107586118,LOC107687659,LOC107720576,LOC107553712,LOC107705088,LOC107571963,LOC107702870,LOC107723027 other downstream 297643 22060015 ~ 22068757 (-)
G66116 gfpt1,LOC107710818,LOC107678434,LOC107562636,LOC107553119,LOC107752562,LOC108426669,LOC103362312,LOC101170101 other downstream 334407 22028732 ~ 22031993 (-)
G66119 gfpt1,LOC107710818,LOC107752562,LOC107678434,LOC102792631 other downstream 340609 22013973 ~ 22025791 (-)
LOC122349902 nfu1,LOC107678441,LOC107553147,LOC107664472,LOC107570003 other upstream 266658 22637275 ~ 22640323 (-)
LOC122350259 LOC107678445,LOC107752560,LOC101882811,LOC107553112,LOC107757078,LOC108426735,LOC107703990,LOC107757081,LOC107553140,LOC107678447,LOC107752570 other upstream 356563 22727180 ~ 22747079 (-)
G66310 NA other upstream 425005 22795622 ~ 22796362 (-)
ddx51 ddx51 other upstream 458587 22829204 ~ 22835591 (-)
tprg1l tprg1l,LOC107698845,LOC107710788,LOC107678419,LOC107748986 other upstream 555839 22926456 ~ 22931165 (-)

Expression


Co-expression Network