ccn1l2 (LOC107698087,LOC107556215,LOC107563854,LOC107678465,LOC107714581,LOC107721104)


Basic Information

Item Value
gene id ccn1l2
gene name LOC107698087,LOC107556215,LOC107563854,LOC107678465,LOC107714581,LOC107721104
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 20700023 ~ 20707196 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043248007.1
ctctcgctctctctctctctcgctctctctcgctcactctATAAGGTGACCTGCCTCTCTGGAAATGCTCTGACAAGGCATCTGCATCTGCATTTGAGTCTTgctatagttttagtttagtaacTAATCTTATTGATGCACTGGATAACTGGACTATCTTTGGAGCATTTGCTCTGAGGTCTTTGGAGTCATTTAGAATAAAAGTGGATAAACCTGCTTTTGCACTGGggatttttacttgtttttttttttggttttttccaTTGGGATTCATCTTTTGAAGAGCATGGAAATGTGTTCTGGAAGGAATCGGAGGAGTCTTGCTGCTGTTTGCACCATGTTGATGTTTGTCGTATGTTCAGCTGAAGGAGAGGCGTCCAGAGGCTGTTCCCGGCCCTGCTCCTGCCCCCCGTCTCCACCCTCCTGTCCGCTCGGAGTGAGCTGGGTGCCGGACGAGTGCGGCTGCTGTAAGGTGTGCGCCCAGCAGTTCAACCAGGACTGTGGCCCCGACCGACCCTGTGACCACATCAAGGGCCTGCGCTGCCACCTAGGGGCCGGAGGGGACCCTCGACGGGGGCTCTGCAGAGCTGAGGCTCAGGGCCGTCCGTGTGAGTTTGCCGGTCGAGTGTATCAGCACGGGGAGGATTTCCAGCCCGGCTGTCAGCACCAGTGCAGCTGTATGGATGGCGTGGTGGGCTGTATGCCCCTGTGTCCACACAACATCCCCCTGCCCCGCAGACACTGCTCCAACCCGCGTCTGGAGACGCCGCCGGGGCGCTGCTGTGAGGAGTGGATGTGTGACGATGACAACAGCATCGGGGAAGACCCAGCCGACCCCCGTCCCGATCACAGCCCGTCCAACCACATCAGCAAGCTCATACAGGGCCCTAACAGTGTCCTCACCCGCAGGGGATCCTCTCaagAGTGGACGTCTCTGCCGGTGTCTCGGGTTCCCTTCCCATCATCCAAATGTTTCCCACAGACCACGGACTGGTCCGATTGCTCTGCTTCCTGCGGGTTCGGCGTCTCGAGTCGTGTGACCAACAACAATGGCCAGTGCAAGCTTGTTCGAGAGACTCGGCTTTGCCAGATCCGAGAGTGTGACATCGCTCCAGCTATGAAGAAAGGAAAGACGTGCAGGAAAGCGGTGAGGTCTCGGGAACCGGAGCGGATCACGTTCGCCGGCTGCTCCACGGCCCGCCGCTACCGGCCCCGCAGCTGCGGCTCGTGCGTGGACGGCAGGTGCTGTCGGCCCTCCTCGTCCCGCACGGTGCGCCTGCGCTTCCTCTGCCCCGACGGAGAGAGCATCGCGCGCAACTTCATGTGGATCCAGCGCTGCCGCTGCAGCAGGAGCTTCTGTGGggctcagagagagagatcctCGCCCGCCGTCAGCCTTCACAACGACATACACACCTTCCctcgctgaacacacacacacacacactacacggCTAAACGCTTCTCACTCTCAGAGGACGTTCCTGAACTGTAGAATAGTAAACTGTACTAGACTGTATATAGTTTTTGCACTTTATGCGTTCCTCCTTTTCTTTGAGCTGGACTTTTCTCATGAAAACAGGCCCAGGTCACTCTTCTTGAGGATCCGTCAAAAGGCATTGTTAGCTgtctttctgcttttatttattccGTTATTTTTAAACCCCAAGTGTTTCTTGTATCTTGAAGGACAAGCGGTTTATTTCAGATGAATGACTTCCCGTCACTCGATGGGTAAGAGAATGCACTAGTGATGAGGGCGGTGAGATATTACCTGGTTAAGGGAGAAAATCAagactttttgaaaaaaaaaaaaaaataaataaaaaaattgtctggtaaagtaaaaattgttgtgttgttttcagaaaaaccaAGTTAAATTTGAGTGAGCTTTTGCATCAAACAATGATCTGCCAACGAGGGAAGCTGAATAATCTTGCATTTGAagtaagattattttgcttaccccattcattttgacttgttttgaaattttttcttgatttaagacAAAAATTGCAGTGTACTCGAATTTTAAGGTGCACAGATGTCTTTCGCAATTTTCATGAGTTAACGTGTGGAGCGAAGCAGGACAGAGATGAGTGTGAGCGGACGGCGTTGTCTTTTGTACAGTGTACAGGCTTCACTATAGGTGGAGTGACTCTTTGAGACTGCTTCATTTTTCGGGGCATGCTTTAAATTCTAGACGCTCTCTTGTATAGGAGTAAACGACTATTTGTATAGTTAAGATATTGAATATAAATGACTTTGCTGGTCCGTTtgtgttacaaaaaataaaacattttcaaaag

Function

NR:

description
PREDICTED: protein CYR61-like

GO:

id name namespace
GO:0001558 regulation of cell growth biological_process
GO:0005576 extracellular region cellular_component
GO:0005520 insulin-like growth factor binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043248007.1 True 2315 mRNA 0.50 5 20700023 20707196

Neighbor

gene id symbol gene type direction distance location
si:dkey-90l8.3 si:dkey-90l8.3,LOC107714563,LOC107698086,LOC107556214,LOC107563853,LOC103024553,LOC108426648,LOC108264996 coding downstream 3333 20690830 ~ 20696690 (-)
bcl2l16 bcl2l16,LOC107714610,LOC107556213,LOC107698085,LOC107721090,LOC107678407 coding downstream 35494 20662169 ~ 20664529 (-)
adgrd2 LOC107721081,LOC107678382,LOC107563844,LOC107570012,LOC107714589 coding downstream 85726 20592465 ~ 20614297 (-)
chmp4bb chmp4bb,LOC107756851,LOC107691553,LOC107702881,LOC107566963,LOC107573971 coding downstream 231118 20465898 ~ 20468905 (-)
LOC122350494 eif2s2,if2b,LOC107566961,LOC107756850,LOC107739644,LOC107691551,LOC107573966 coding downstream 235814 20460129 ~ 20464209 (-)
stambpb stambpb,LOC107714511,LOC107721092,LOC107678409,LOC107563848,LOC103470718 coding upstream 41243 20748439 ~ 20756847 (-)
tgoln2 NA coding upstream 50612 20757808 ~ 20762487 (-)
tcf7l1b tcf7l1,tcf7l1b,LOC107721095,LOC107556226,LOC107747791,LOC107563849,LOC107698102,LOC108265410,LOC106585616 coding upstream 64497 20771693 ~ 20822052 (-)
LOC122350675 cox5b1,LOC107698109,LOC107556219,LOC107747804,LOC108426657,LOC107602047,LOC107718706 coding upstream 209832 20917028 ~ 20919100 (-)
LOC122350417 phyhip,LOC107747796,LOC107721105,LOC107698112,LOC107556234,LOC107678475,LOC108426626 coding upstream 224754 20931950 ~ 20943305 (-)
G65704 NA non-coding downstream 89100 20610562 ~ 20610923 (-)
G65697 NA non-coding downstream 129730 20567158 ~ 20570293 (-)
G65696 nr6a1a,nr6a1,LOC107721088,LOC107698081 non-coding downstream 140052 20559631 ~ 20559971 (-)
LOC122349883 NA non-coding downstream 194050 20491849 ~ 20505973 (-)
G65682 NA non-coding downstream 235267 20464551 ~ 20464756 (-)
G65717 NA non-coding upstream 16070 20723266 ~ 20725454 (-)
G65732 NA non-coding upstream 173826 20881022 ~ 20881433 (-)
G65728 dbnl non-coding upstream 179028 20886224 ~ 20892629 (-)
G65750 NA non-coding upstream 219415 20926611 ~ 20926980 (-)
G65752 NA non-coding upstream 221066 20928262 ~ 20928477 (-)
LOC122350560 ppia,LOC107566959,LOC107756826,LOC107722982,LOC107591936,LOC107691583 other downstream 278727 20415065 ~ 20421296 (-)
zgc:154046 adamts13,zgc:154046,LOC107702807,LOC107548275,LOC107722731,LOC107702859,LOC108426726,LOC108265337,LOC107740996,LOC107565124,LOC107691587 other downstream 565678 20118007 ~ 20134345 (-)
si:ch211-218o21.4 si:ch211-218o21.4,LOC107550930,LOC107702847,LOC107727198,LOC107747209,LOC107683911 other downstream 1266732 19428738 ~ 19433291 (-)
LOC122351133 NA other downstream 1497646 19202277 ~ 19202377 (-)
LOC122350102 LOC107717958,LOC107676625,LOC107550916,LOC107682323,LOC107659265 other downstream 1652054 19023713 ~ 19047969 (-)
LOC122350336 LOC107714596,LOC107556216,LOC107698089 other upstream 11744 20718940 ~ 20723155 (-)
gna14a gna14a,gna14,LOC107698092,LOC107678467,LOC107556222,LOC107721075,LOC108426707,LOC108265545 other upstream 307797 21014993 ~ 21025831 (-)
G66086 si:dkey-32e23.4,LOC107678420,LOC107562650,LOC107728358,LOC107710834 other upstream 1064272 21771468 ~ 21776620 (-)
G66090 NA other upstream 1077508 21784704 ~ 22254189 (-)
G66119 gfpt1,LOC107710818,LOC107752562,LOC107678434,LOC102792631 other upstream 1306777 22013973 ~ 22025791 (-)

Expression


Co-expression Network