commd10 (commd10,LOC107728250,LOC107663591)


Basic Information

Item Value
gene id commd10
gene name commd10,LOC107728250,LOC107663591
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 1140698 ~ 1159286 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043248013.1
GTGGGCGTGTCGACGCGCTGACGTCACGCGTCACGTGCCCTGGCACTAGGAAGTGAGTCTGGACGcgaaaagggggaaaaaacacgAAACGAGCGGAATAACTATGAGTTCAATAATCCCAGAGACACAGAGCATCAAAGAAGCTGTGATTCACATCAACTCCATCGACATCAACAAGTTCTCCAGACTCCTGTCCCGCATCCTGCAGAAACTCCAcctgaaggagGAGCGCTCCTTCagtgaggaggaagaggagaagctCCAGAGCGCTCTATCTCTGGAGAAGCAGACTCTTCATCTTCTGCTGGAGACTCTGTCCTTCATCCTCGAACAGGCCGTCTATCATAACCTGAAGCCGGCGTCTCTCAGGCAGCAGCTGGAGAACCTCAGCGTCCAGACGGAGAAGGCCCAGGTGTTTGCTCAGGTCTGGGCTGCAGCTGCTCCCGAGGTTCTGGAGAAGATCCGACTCGGGATATTTGCTCCTAAAAAGCTGGATGTGGTCGGCTGGCAGCTCAATCTGCAGATGTCTTCATCGTCTCGGAGCAGACTGAAAGCTCCTCACGCCGTCCTCAATCTGGGGCTCCGCACGGAGGACGACAGCGAGAGCCTGCAGGACGTGTTTGTGGAGCTCAACCACCAGGATCTGCTGGACTTCTACAATCAGATGGAGATGATCCAGACTCAGCTGGACTCTCTGAGCTGATCCGGCTCCGTCCCATGATTCCTCTGGATCGCTGTGTTTTCTGAAGATCCAGCCTGATCACTTTTCAGCAGGAAGTAAAGAAGGACACACTTTAATATGAAAGACGTCTTTAAATGGAAACGCATGGAAGCAGACTTTCAGCTAGGATTTTACGAGGGTAAATAAAGAAGTGTTGTTTCACTGa
>XR_006251689.1
TGGCACTAGGAAGTGAGTCTGGACGcgaaaagggggaaaaaacacgAAACGAGCGGAATAACTATGAGTTCAATAATCCCAGAGACACAGAGCATCAAAGAAGCTGTGATTCACATCAACTCCATCGACATCAACAAGTTCTCCAGACTCCTGTCCCGCATCCTGCAGAAACTCCAcctgaaggagGAGCGCTCCTTCagtgaggaggaagaggagaagctCCAGAGCGCTCTATCTCTGGAGAAGCAGACTCTTCATCTTCTGCTGGAGACTCTGTCCTTCATCCTCGAACAGGCCGTCTATCATAACCTGAAGCCGGCGTCTCTCAGGCAGCAGCTGGAGAACCTCAGCGTCCAGACGGAGAAGGCCCAGGTGTTTGCTCAGGTCTGGGCTGCAGCTGCTCCCGAGGTTCTGGAGAAGATCCGACTCGGGATATTTGCTCCTAAAAAGCTGGATGTGGTCGGCTGGCAGCTCAATCTGCAGATGTCTTCATCGTCTCGGAGCAGACTGAAAGCTCCTCACGCCGTCCTCAATCTGGGGCTCCGCACGGAGGACGACAGCGAGAGCCTGCAGGACGTGTTTGTGGAGCTCAACCACCAGGATCTGCTGGACTTCTACAATCAGATGGAGATGATCCAGACTCAGCTGGACTCTCTGAGCTGATCCGGCTCCGTCCCATGATTCCTCTGGATCGCTGTGTTTTCTGAAGATCCAGCCTGATCACTTTTCAGCAGGAAGTAAAGAAGGACACACTTTAATATGAAAGACGTCTTTAAATGGAAACGCATGGAAGCAGACTTTCAGCTAGGATTTTACGAGGgCTTTGCTCAGGTCTAAGATGGACGGCTGAGGACGTGATCAGATCTTCTGGAGGAGACTCGTCTCTCGTTCTGCGGCGTGACGCACAGATCACTGAACAGATGAACAGATGGAGAGACGCTCGGAGCCGAGAGACTCCAGCAGAGACCGGCAAAACAGAACAGAGAGTTCTGGAGGAACGACACCAACAGAGGAGAAGTCCGGTGCTGAAGATGATACAGGAAGTGGTCCTGAAGCATCTGTAAGAGATTCACAGCAGGCTGCGAGGTTTAAGAGTGAAATCAGAGTCTATCCACGAGATACGTGAAGTTAGGAATAGGTGATTCTATCAAGGTCATGAGTTTCTGAAAgccttttttatcatttgtttatccatttttttaaatgcggagaactgcattattttgtgtgtgtcttgtcTTCGGTGGTTTTGAAATGTGTATCAATTAGTCTTtttgataaaaacaatttacactgtgtgtgagagtgtgcgtgtgagtgtgtgagtgagtgtgtgtgtgagtgagt

Function

symbol description
commd10 Orthologous to human COMMD10 (COMM domain containing 10).

NR:

description
COMM domain-containing protein 10

GO: NA

KEGG:

id description
K22566 COMMD10; COMM domain containing 10

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043248013.1 False 887 mRNA 0.52 7 1143871 1159286
XR_006251689.1 True 1347 transcript 0.49 8 1140698 1159246

Neighbor

gene id symbol gene type direction distance location
dmxl1 dmxl1,LOC107571775,LOC107663590,LOC107704574 coding downstream 82771 1016890 ~ 1057927 (-)
prr16 LOC107713553 coding downstream 136285 998648 ~ 1004413 (-)
LOC122350790 lox,LOC107726222,LOC107704580 coding downstream 152138 981634 ~ 988560 (-)
LOC122350969 sncaip,LOC107577394 coding downstream 160665 966169 ~ 980033 (-)
snx2 snx2,LOC107566389,LOC107713555,LOC107704573 coding downstream 179324 947899 ~ 961374 (-)
ap3s1 ap3s1,LOC107661175,LOC107566394,LOC107729057 coding upstream 1114 1160400 ~ 1168457 (-)
LOC122350094 NA coding upstream 85548 1244834 ~ 1248364 (-)
pym1 LOC107701384 coding upstream 90774 1250060 ~ 1252516 (-)
LOC122350264 dgcr6,LOC107572069,LOC107721026,LOC105899531 coding upstream 287714 1447000 ~ 1454530 (-)
dtx1 dtx1,LOC107692206,LOC107671029 coding upstream 335219 1494505 ~ 1523464 (-)
G60153 NA non-coding downstream 18465 1120928 ~ 1122233 (-)
G60133 NA non-coding downstream 75498 1064397 ~ 1065200 (-)
G60131 NA non-coding downstream 78460 1061093 ~ 1062238 (-)
G60118 hsd17b4 non-coding downstream 128880 1011367 ~ 1011818 (-)
LOC122351117 NA non-coding downstream 194359 924448 ~ 946339 (-)
G60154 NA non-coding upstream 25022 1184308 ~ 1184649 (-)
G60170 NA non-coding upstream 55021 1214307 ~ 1218802 (-)
G60169 trim36,LOC107749435,LOC107573790 non-coding upstream 72790 1232076 ~ 1266809 (-)
G60166 LOC107701385,LOC107573793,LOC107749411,LOC107572966,LOC107728257,LOC107661167 non-coding upstream 105313 1264599 ~ 1266232 (-)
G60187 NA non-coding upstream 109512 1268798 ~ 1269384 (-)
G60098 NA other downstream 2546 1135401 ~ 1138152 (-)
csgalnact1b LOC107712620 other downstream 401326 732793 ~ 739372 (-)
LOC122349987 LOC107661519,LOC107712504,LOC107726877,LOC107704593,LOC107573347,LOC794598 other downstream 408854 723145 ~ 731844 (-)
ccl27a NA other downstream 569725 565886 ~ 570973 (-)
LOC122350266 dgcr6,LOC107572069,LOC107721026,LOC105899531,LOC103029434 other upstream 189885 1349171 ~ 1356953 (-)
LOC122350657 pi4ka,pi4kab,LOC107671001,LOC108440297,LOC107698013,LOC107722847,LOC107559589 other upstream 402260 1561546 ~ 1606609 (-)
G60220 NA other upstream 417519 1576805 ~ 1580616 (-)
pi4kab pi4ka,LOC107574565,LOC107671001,LOC107722847,LOC108440297 other upstream 573578 1732864 ~ 1821650 (-)
LOC122349998 sh3glb2b,LOC107748508,LOC107681863 other upstream 589776 1749062 ~ 1762549 (-)

Expression


Co-expression Network