LOC122349901


Basic Information

Item Value
gene id LOC122349901
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 1701712 ~ 1702196 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XR_006251537.1
GGGAGCGTTGCTGAGAACTGAGAATATGCTGTACCGACTAATAtggtgTGACTGGATTATTGCCTGACTGTGGCCTGACCATCTTGTCGAAATAGTGGATGTGAAAGGGATGCATGGTTACCGTTTACTTTAtggttaaaatattgttttgtttcgtttctttaTTACCTTTTGTTTGTAAGTGTGGAGATCCGGAGTGGTAGAGATTGAGGTACTAGTGAATGTGTTTGGTTGttgattttatgtttgtgtacCTTGTATTGCCCActgttaattgtgttttg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_006251537.1 True 284 lncRNA 0.39 3 1701712 1702196

Neighbor

gene id symbol gene type direction distance location
LOC122350660 NA coding upstream 52094 1648478 ~ 1649618 (+)
LOC122351062 NA coding upstream 141345 1559120 ~ 1560367 (+)
LOC122350265 rasal1 coding upstream 220158 1456231 ~ 1481554 (+)
spats2 LOC107749411,LOC107701385,LOC107573793,LOC107661167,LOC107572966,LOC107728257 coding upstream 435478 1253631 ~ 1266234 (+)
LOC122350095 NA coding upstream 458554 1236932 ~ 1243158 (+)
serpind1 serpind1,LOC107671000,LOC107738496,LOC107559590,LOC107722856,LOC107698014,LOC107560052 coding downstream 100499 1802695 ~ 1807402 (+)
snap29 snap29,LOC107722859,LOC107560055,LOC107726963 coding downstream 120440 1822636 ~ 1827411 (+)
LOC122350512 NA coding downstream 234565 1936761 ~ 1946949 (+)
ikbkb ikbkb,LOC107671012,LOC107722850,LOC107754415 coding downstream 264387 1966583 ~ 1995859 (+)
enkd1 si:ch211-220d9.3,enkd1,LOC107754420,LOC107699630,LOC107657207,LOC107670972 coding downstream 303888 2006084 ~ 2014684 (+)
G59940 LOC102197881,LOC106633085 non-coding upstream 6892 1561459 ~ 1694820 (+)
G59943 NA non-coding upstream 34727 1652084 ~ 1666985 (+)
G59938 NA non-coding upstream 52972 1559132 ~ 1648740 (+)
G59902 dtx1,LOC107692206,LOC107572068,LOC107671029,LOC101885597 non-coding upstream 206981 1401759 ~ 1494731 (+)
G59903 NA non-coding upstream 210070 1396047 ~ 1491642 (+)
G59966 NA non-coding downstream 9711 1711907 ~ 1719099 (+)
G59968 NA non-coding downstream 22365 1724561 ~ 1778486 (+)
G59969 NA non-coding downstream 26871 1729067 ~ 1782537 (+)
G59974 NA non-coding downstream 52924 1755120 ~ 1825836 (+)
G59982 NA non-coding downstream 98109 1800305 ~ 1802086 (+)
pggt1b pggt1b other upstream 482908 1210815 ~ 1218804 (+)
znf608 znf608,LOC107574328,LOC107697597,LOC107712568,LOC107704598,LOC107573349,LOC107726216 other upstream 849708 842077 ~ 852004 (+)
G59807 NA other upstream 896873 803653 ~ 804839 (+)
cdc14b cdc14b,LOC107661524,LOC107704583,LOC107568104,LOC107726879,LOC107570987 other upstream 1151025 537775 ~ 550687 (+)
G60259 LOC107560031,LOC107559593,LOC108412499,LOC107754396 other downstream 213264 1915460 ~ 1918371 (+)
polb polb,LOC107670984,LOC107722860 other downstream 312663 2014859 ~ 2020034 (+)
LOC122350053 NA other downstream 328628 2030824 ~ 2035980 (+)
LOC122350758 dynll1,dynll2a,LOC103397138,LOC100698873,LOC107559583 other downstream 335503 2037699 ~ 2039836 (+)
G60788 lhfpl4b,LOC107584928,LOC107674308,LOC107743140,LOC107727430,LOC107701811,LOC103032126,LOC105898894 other downstream 2146418 3848614 ~ 3850557 (+)

Expression


Co-expression Network