LOC122349981


Basic Information

Item Value
gene id LOC122349981
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 4949633 ~ 4955156 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XR_006251549.1
TGTTTTTTAGATTATGTTTGTGCATTCTATATATAGCCGTCCCCAGTGAGCTGTTTCTGTCCGTTGTTTGTTGACAATGGTGTCATGAGAGCAGGGGTTACGGGGTGTGTGCGGTTGGGTGTGAAGTCACACACTCCGTCTGAGCGGCTCACACTGAATCACAGCTGCTGTCTGGACACGTTCACCGTACCTCACACCTTCCACAGCTGATATGTCACTCCTGGCCTTCGATCAAGTGGCTAATAGATCTCTCAGATCATCAATCTACATCTCGATGAGGCCTAACGATCTGTGTGACTGACTTTCTCCGGTGGAACATAAAAGAGGACTTTCGAAAGTCAGGAGGACAGCATTGGCTTTCATCGTATTTAGCTGAAAGAATTGGACAGGTCGACTCGAGCAGTGCTGTTGTTATCTAGCGTCTGCACATGTCTGCATGTGGACAAAACCCATCAGTGTAACCACTGGAGCGGCAGCCATCTTATCGTGAACAGAACCGGCGCCGCTAGAGCTTCTTCTTTCCCCGTTTCTGCACTGGACCCCAGCGGTCGCGTCAAACGGATAAGACCGAAACGTCTCGGCTCTTGACACCTCTCTTAAGGTCTGAGATTACAGGACTGGGAATTAGACATCATCCTTCGGAGGAGACTATCAGCCCCCGACACACAGTACATGTTCAGCAAGGCGTGATAATCTCTCTGCGTGTGTTAACATGACATGAAAGCAATTGTGCTTTATTCGTCTCTGATAAATCCTTATTAATCTTAATCTTAGTTCAAAATCCAAAAAAGTTCACTGTGCTCCATCTTCTGTCAGAGAATTCCTTATAGGCCTGGCTGGACTTTAATTGTGGTAAAACGTGTTGTAATGTGAATTACAATGTGAATTATTGACAAAAGGCAAGGACGGAATGCAGAAGGTTTGTGAATGACATGCATTCAAATTTTGAGGAAACGAGCAGAACACATGCAAATATTCTGTTTGtgttaaatattgcatttatatacattactgTATAGTGATGTGGAAGCTATTAACTATG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_006251549.1 True 1042 lncRNA 0.45 3 4949633 4955156

Neighbor

gene id symbol gene type direction distance location
si:dkey-8e10.3 si:dkey-8e10.3,LOC107743123,LOC107601742,LOC107674312,LOC107734510,LOC107653415,LOC107584926 coding downstream 89332 4853786 ~ 4860301 (-)
ptpn18 LOC107743092,LOC107653414,LOC107601761,LOC107734536,LOC107674370,LOC107584895 coding downstream 260153 4674326 ~ 4689480 (-)
plxna3 plxna3,LOC107734520,LOC107653403,LOC107743094,LOC107674285,LOC106572068 coding downstream 294164 4510069 ~ 4655469 (-)
slc6a8 slc6a8,LOC107734513,LOC103036862,LOC107653404,LOC108441094 coding downstream 483576 4432982 ~ 4466057 (-)
zgc:86609 zgc:86609,LOC107653429,LOC107743102,LOC107601757,LOC107734524,LOC107674347,LOC108265646 coding downstream 633897 4311724 ~ 4315736 (-)
slc66a1 pqlc2,LOC107734535,LOC107674372,LOC107725314,LOC107664981 coding upstream 398463 5353619 ~ 5361985 (-)
trim33 trim33,LOC107725313,LOC107734526,LOC107664979,LOC107570974 coding upstream 407570 5362726 ~ 5384419 (-)
bcas2 bcas2,LOC107664982,LOC107725297,LOC107734517,LOC107674303 coding upstream 430551 5385707 ~ 5390120 (-)
dennd2c dennd2c,LOC107665005,LOC107598967,LOC107734514,LOC107674357,LOC107725285,LOC107566809 coding upstream 435669 5390825 ~ 5410171 (-)
ampd1 ampd1,LOC107664993 coding upstream 455795 5410951 ~ 5423401 (-)
G61209 NA non-coding downstream 15836 4933569 ~ 4933797 (-)
G61196 NA non-coding downstream 40163 4908840 ~ 4909470 (-)
G61188 NA non-coding downstream 64202 4876960 ~ 4885431 (-)
G61186 NA non-coding downstream 82447 4866981 ~ 4867186 (-)
G61183 NA non-coding downstream 96177 4852279 ~ 4853456 (-)
G61216 NA non-coding upstream 6427 4961583 ~ 5005566 (-)
G61215 pim1,LOC107584899,LOC107598956,LOC107734527,LOC107674355,LOC107653400,LOC107725309,LOC107391354 non-coding upstream 46411 5001567 ~ 5002883 (-)
G61459 NA non-coding upstream 188043 5143199 ~ 5266038 (-)
G61476 NA non-coding upstream 367956 5323112 ~ 5366348 (-)
G61478 NA non-coding upstream 381831 5336987 ~ 5352457 (-)
G61071 LOC107601747,LOC107653424,LOC107734537,LOC107674377,LOC107578221 other downstream 552559 4393213 ~ 4397074 (-)
G61023 NA other downstream 642134 4300992 ~ 4307499 (-)
G60967 LOC107674359,LOC107701814,LOC107727428,LOC107743108,LOC107552221 other downstream 857476 4088724 ~ 4092157 (-)
zgc:113363 LOC107743117,LOC107701819,LOC107727412,LOC107584929 other downstream 942827 4000331 ~ 4006806 (-)
lhfpl4b lhfpl4b,LOC107584928,LOC107674308,LOC107727430,LOC107743140,LOC107701811,LOC107552174,LOC103032126,LOC108440531 other downstream 1099043 3845453 ~ 3850590 (-)
LOC122350811 NA other upstream 232098 5187254 ~ 5187921 (-)
LOC122349940 fnbp1,fnbp1a,LOC107720911,LOC107675683,LOC107661630,LOC107757295,LOC107674371 other upstream 240596 5195752 ~ 5207522 (-)
nr1h5 nr1h5,LOC107653410,LOC107598964,LOC107725330,LOC107674374,LOC107734534,LOC107570978 other upstream 386238 5341394 ~ 5351279 (-)
pip5k1bb pip5k1bb,LOC107664977,LOC105901155,LOC107566804,LOC108412809,LOC108265367,LOC108234418 other upstream 521057 5476213 ~ 5510943 (-)
c8h9orf116 LOC107757294 other upstream 650016 5605172 ~ 5609572 (-)

Expression


Co-expression Network