LOC122350886


Basic Information

Item Value
gene id LOC122350886
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 7377755 ~ 7378459 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XR_006251630.1
CAGGAGAGCCTGGAGATAAAGGGAATCCAGGCAGCCCTGGGAAGATTGGATCAATTGGTGTTTCAGGCCCAAGTGGGAAGAAAGGAGAGCTTGGAACAGGAGGCGAAATGGGGCCCGTGGGTCAGCCAGGAGCTGTGGGTCATCGTGGACTAAAGGGAAAACTAGGACCTTCAGGACCTTCAGGGGGAAAAGGATTCAAGGGTCAACCAGGGCCAAAAGGAATGAGCGGTTCTCATGGAAGGAGAGGAAGTAAAGGTGTTGCAGGAAAGCCAGGACCTCATG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_006251630.1 True 282 lncRNA 0.54 5 7377755 7378459

Neighbor

gene id symbol gene type direction distance location
LOC122350872 soat1,LOC107657858,LOC107758003,LOC107700347 coding downstream 7300 7363235 ~ 7370455 (-)
cep350 cep350 coding downstream 208963 7137062 ~ 7168792 (-)
qsox1 qsox1,LOC107665072,LOC107755296,LOC107758006,LOC107699344,LOC107603198 coding downstream 242259 7112136 ~ 7135496 (-)
sin3b sin3b,LOC107755301,LOC107758010,LOC107699271 coding downstream 502790 6860907 ~ 6874965 (-)
def6a def6a,LOC107550223,LOC107755289,LOC107599059,LOC107757990,LOC107700524 coding downstream 518049 6850516 ~ 6859706 (-)
LOC122350884 NA coding upstream 2087 7380546 ~ 7382812 (-)
LOC122350867 bcar3,LOC107707585,LOC107599011,LOC107657879,LOC107699431,LOC107603218,LOC107757998 coding upstream 216524 7594983 ~ 7652306 (-)
LOC122350881 agbl4,LOC107657883,LOC107603279 coding upstream 310402 7688861 ~ 7740456 (-)
bend5 bend5,LOC107707580,LOC107757978,LOC107700377,LOC106584333 coding upstream 371956 7750415 ~ 7763209 (-)
agbl4 agbl4,LOC107603279,LOC106613892 coding upstream 658163 8036622 ~ 8137275 (-)
G61865 NA non-coding downstream 69415 7306112 ~ 7308340 (-)
G61860 cacna1e,LOC107707593,LOC107657843,LOC107599003 non-coding downstream 96590 7274590 ~ 7281165 (-)
G61782 NA non-coding downstream 514801 6862028 ~ 6862954 (-)
G61663 NA non-coding downstream 719471 6657498 ~ 6658284 (-)
G61640 NA non-coding downstream 815837 6561450 ~ 6561918 (-)
LOC122350888 NA non-coding upstream 11829 7390288 ~ 7394209 (-)
G61868 abl2,LOC107599009,LOC107699422,LOC107657876,LOC107707589,LOC107603207 non-coding upstream 167351 7545810 ~ 7548323 (-)
G61959 NA non-coding upstream 283758 7662217 ~ 7663259 (-)
G61965 NA non-coding upstream 371244 7749703 ~ 7778564 (-)
G61967 NA non-coding upstream 500958 7879417 ~ 7974020 (-)
lhx4 lhx4,LOC107699337,LOC107550233,LOC107758007,LOC107599001,LOC107755297,LOC107665078 other downstream 274762 7091450 ~ 7102993 (-)
xpr1a xpr1a,LOC107758009,LOC107755298,LOC107699288,LOC107665065,LOC107603171,LOC107599040 other downstream 321326 6875349 ~ 7056429 (-)
LOC122350104 LOC107755295,LOC107665061,LOC107598999 other downstream 561008 6814471 ~ 6816747 (-)
LOC122350671 fibcd1,LOC107739453,LOC108428067,LOC102776889,LOC107596897,LOC107700935,LOC105015243,LOC106936583 other downstream 934773 6423742 ~ 6442982 (-)
LOC122350596 LOC107557202,LOC107757303,LOC107725315,LOC107674335 other downstream 1416649 5919961 ~ 5961106 (-)
spata6 LOC107657881,LOC107699473,LOC107549716,LOC107757996,LOC107599047 other upstream 299037 7677496 ~ 7687562 (-)
LOC122350139 elavl4 other upstream 738549 8117008 ~ 8232774 (-)
eps15 eps15,LOC107752431,LOC107599798,LOC107743869 other upstream 1013886 8392345 ~ 8416553 (-)
mrps36 mrps36,LOC107657871,LOC107599810,LOC107699743,LOC107743861,LOC107548364,LOC107710901 other upstream 1268811 8647270 ~ 8649983 (-)
pola2 pola2,LOC107599808,LOC107657899 other upstream 1273845 8652304 ~ 8657286 (-)

Expression


Co-expression Network