Item | Value |
---|---|
gene id | G31710 |
gene name | NA |
gene type | unknown |
species | grasscarp (Ctenopharyngodon idella) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | CI01000004 |
NCBI id | null |
chromosome length | 17451736 |
location | 11637251 ~ 11642400 (+) |
genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
id | name | namespace |
---|---|---|
GO:0016071 | mRNA metabolic process | biological_process |
GO:0000375 | RNA splicing, via transesterification reactions | biological_process |
GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | biological_process |
GO:0006397 | mRNA processing | biological_process |
GO:0000398 | mRNA splicing, via spliceosome | biological_process |
GO:0016607 | nuclear speck | cellular_component |
GO:0005681 | spliceosomal complex | cellular_component |
GO:0005685 | U1 snRNP | cellular_component |
id | description |
---|---|
ko03040 | Spliceosome |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
TU35938 | True | 2316 | TUCP | 0.44 | 3 | 11637251 | 11642400 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
CI01000004_11622516_11634475 | NA | coding | upstream | 2326 | 11622516 ~ 11634925 (+) |
CI01000004_11608619_11618346 | MALRD1 | coding | upstream | 18824 | 11608619 ~ 11618427 (+) |
CI01000004_11598169_11606266 | MALRD1 | coding | upstream | 30968 | 11598169 ~ 11606283 (+) |
CI01000004_11592217_11595358 | NA | coding | upstream | 41893 | 11592217 ~ 11595358 (+) |
CI01000004_11547197_11557429 | CACNB2B | coding | upstream | 79697 | 11547197 ~ 11560552 (+) |
CI01000004_11666900_11667179 | NA | coding | downstream | 24500 | 11666900 ~ 11667659 (+) |
CI01000004_11668089_11670426 | ACKR4A | coding | downstream | 25303 | 11667703 ~ 11670922 (+) |
CI01000004_11747225_11747971 | RNF182 | coding | downstream | 104136 | 11746536 ~ 11748095 (+) |
CI01000004_11750356_11765031 | RANBP9 | coding | downstream | 107365 | 11749765 ~ 11766104 (+) |
CI01000004_11771176_11773391 | EPDR1 | coding | downstream | 128689 | 11771089 ~ 11773516 (+) |
G31690 | NA | non-coding | upstream | 71096 | 11515811 ~ 11566155 (+) |
G31677 | NA | non-coding | upstream | 170880 | 11466036 ~ 11466371 (+) |
G31665 | NA | non-coding | upstream | 230346 | 11406674 ~ 11406905 (+) |
G31664 | NA | non-coding | upstream | 230640 | 11406286 ~ 11406611 (+) |
G31721 | NA | non-coding | downstream | 50455 | 11692855 ~ 11694150 (+) |
G31723 | NA | non-coding | downstream | 51987 | 11694387 ~ 11696280 (+) |
G31727 | NA | non-coding | downstream | 64184 | 11706584 ~ 11706970 (+) |
G31737 | NA | non-coding | downstream | 106125 | 11748525 ~ 11748761 (+) |
G31625 | NA | non-coding | downstream | 148597 | 11790997 ~ 11803727 (+) |
G30797 | NA | other | upstream | 1139463 | 10497376 ~ 10497788 (+) |
CI01000004_08976512_08980033 | TTPA | other | upstream | 2656267 | 8976254 ~ 8980984 (+) |
G28859 | NA | other | upstream | 3037648 | 8599235 ~ 8599603 (+) |
CI01000004_08414451_08436256 | NA | other | upstream | 3186024 | 8414316 ~ 8439933 (+) |
CI01000004_07654234_07655677 | MRPL34 | other | upstream | 3980868 | 7654234 ~ 7656383 (+) |
G31865 | NA | other | downstream | 549730 | 12192130 ~ 12197418 (+) |
CI01000004_12646972_12652534 | NA | other | downstream | 1000354 | 12646838 ~ 12652570 (+) |
CI01000004_14036114_14036449 | KIAA0040 | other | downstream | 2381147 | 14035393 ~ 14039142 (+) |
CI01000004_15091390_15096502 | GA45B, GADD45B, GADD45BB | other | downstream | 3448844 | 15091200 ~ 15097173 (+) |