G31789


Basic Information

Item Value
gene id G31789
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 12179891 ~ 12182005 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU36034
AAAGTTCTGCATAATTAAGGGCGTGGTCACTTGAGTGACAGGTTTGCCGCTGCTGTCTGTGAGCCGTCACTTTACCTCAGCTAATTCCAGCCGCTGAATTTGGCATCTCTGCCGTGTTTGTGCTTGTTTCGGGATTATTTTATACAATTATCAAATAATATGGTTTGCTGTGCAGTTATATGGTCGAGACAGATGTGCGTCTGCGTCTTGGCATTGGATAAATGTTTTGTTCGTGAGATTTACTATGACAATGTCTGGAGAATATGCTTCTCAAGACACAACAAAATCCGACAGCACTGCTTGGATATTATAACTAAAACTGCTGCACTATTTTGAAAAATTATACTTTGGACACAGGCTCATTTGTTTGTGAGAGTCTAATGTATACGATCATGTACAGTTTTACAACATAAACGCTGCTCAGATTGCATAATTTCTTGAAGAACAATGATGGAGAGCAGATCATTTAGAAGAAATATGACACAAACAATGGACAATTTAGCGCTTTTGTGAACAAACAGTGCTGTTGTTTGTTTTTCAATGGACGCTCATGGACATTTTACCCAAGTGCAACGGATTGGATTGATCTCACAATCGCTATTTCATTACAAAAGTATGGAGTCCTGTTTTGATTTTGCGTGTTATCATTTGCACACCCGACAAATTACAATATTACTGTTGCTGGAGTATCTATATTGTAAAAAAGACACCGTAGGTAGTAAACGTTAGAACTTTCAAATGATATAACTTGTTATCTTTATTAATATTTTAGATAGTGTCTAAGATAAATAGATAGCTTCTTTAGCCTGCTAACATGATCACGTCGTGCTAGGCGGCCGTGGTTTCAGCAACAAGGCACCTCAGTTTCAACCACGTCCCGCCTCTTTGCCCATTTTCAGTTATCCGGGAGTGACGTGCTGCCAAGATGGCAGCGGCTGCTTTTTCGCTTCAAAAATGCTCTTCAGAAATCTACGGGTGATGTCACGGACACTACGTCCATATTTTTTTACAGTCTATGGTTCGGACTTGCGCATCAACCCTCAGTTTTTTTTTTTTTTTGGGTGAACCAACCCTTTAAGCATCTAAAACATTTTACTTAAAGGTGAATTAGAAAATTACAGTAAAAGCAATTAAGAGTCTTGAAAATGAGTAAAAACTCCCAAGCATCACATACTCATGAGTTAATTTACCAGGGAATATATAGACATATATTGCAGACCTCACAATTGACCTGTTGGACCAAGTGCCATCACCTCATAACAGGAGTTATATTTGGCACACAGTATATTTTTCATAAATCTGCACTGGCTCCATACAACAGCACTGAAACCTCATTATCATCCAGCATTCAGAGGCACAAAATATTTACTGACCGCAACAAGTTCCTGTAAGGTCCAGCTTCAGTCCCCCAGTCAAGAGCAGGTTATTGCACAAGAGGAAAACAAAGTGTCACATACGGGCCTCTCTGGCTCTGGTATAATTTCACTGCACAATGTTGCTGATTGATAAAACTCAGGTTGAAAGGACTGTTACACATTTAGCGATTGCCAGCAAGGTTCATTTCAACTATACAACGTGCAAACGAGGGGATAATAATCAAGTACTGTCACTATATTCCCCACTAAATCACACCCAAACACACATAGATTTTTTTTCCTCATTATTGAATGCTGTAATTCTAAATATTTTTTAATGCTGATGACCTAAGGGCATTTCAAATCACAAAAATGATGTGCAGTGATTGTCTACCCTGAACAGCATGTGTATATCTGATTGGTAGTATGGTTATCTTGCAGCAAGGGTGCATACTAGTTGTGTGCAAAGAGCTGCCTAACCATGACCAGAAGGAAAACAACAGCACACATCAAACTTCAACTGCCACACAGAATGAAGGAAGACTGTTCACTCCTCACCAAACCTTGGAGTAACTGAGAAGGGGGGGTGGGTGTGTGTGTAACAGAGGACAAAGGCTCAAGCCCAGACATAGCATGAACACCTCACTCACGGCTCCCAAATAGCTGAAGGAAAAAGAGGAATATGTAGACCACATCCATGTAGAGGCAGATGGCTCCAAACACATGCTCCTCTGGGTTCAGAGAGTACCGCCTGTTGCCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU36034 True 2115 lncRNA 0.57 1 12179891 12182005

Neighbor

gene id symbol gene type direction distance location
CI01000004_12033980_12034384 NA coding upstream 145489 12033656 ~ 12034402 (+)
CI01000004_11897082_11898506 MYCB coding upstream 280676 11896232 ~ 11899215 (+)
CI01000004_11863724_11890961 NA coding upstream 288777 11863724 ~ 11891114 (+)
CI01000004_11776595_11786233 STARD3NL coding upstream 392974 11776419 ~ 11786917 (+)
CI01000004_11771176_11773391 EPDR1 coding upstream 406375 11771089 ~ 11773516 (+)
CI01000004_12222833_12223126 NA coding downstream 39921 12221926 ~ 12223244 (+)
CI01000004_12331486_12332789 NA coding downstream 148835 12330840 ~ 12332997 (+)
CI01000004_12353073_12362622 KLHL18 coding downstream 170955 12352960 ~ 12362716 (+)
CI01000004_12362858_12363136 NA coding downstream 180802 12362807 ~ 12363136 (+)
CI01000004_12376518_12381495 NA coding downstream 194419 12376424 ~ 12381705 (+)
G31790 NA non-coding upstream 71 12177900 ~ 12179820 (+)
G31805 NA non-coding upstream 9242 12170321 ~ 12170649 (+)
G31854 NA non-coding upstream 17074 12162358 ~ 12162817 (+)
G31852 NA non-coding upstream 20275 12159365 ~ 12159616 (+)
G31763 NA non-coding upstream 128320 12050825 ~ 12051571 (+)
G31800 NA non-coding downstream 427 12182432 ~ 12182885 (+)
G31885 NA non-coding downstream 2279 12184284 ~ 12184753 (+)
G31886 NA non-coding downstream 4019 12186024 ~ 12186394 (+)
G31887 NA non-coding downstream 6348 12188353 ~ 12188695 (+)
G31865 NA non-coding downstream 11947 12192130 ~ 12197418 (+)
CI01000004_11666900_11667179 NA other upstream 512232 11666900 ~ 11667659 (+)
G31710 NA other upstream 537491 11637251 ~ 11642400 (+)
G30797 NA other upstream 1682103 10497376 ~ 10497788 (+)
CI01000004_08976512_08980033 TTPA other upstream 3198907 8976254 ~ 8980984 (+)
G28859 NA other upstream 3580288 8599235 ~ 8599603 (+)
CI01000004_12646972_12652534 NA other downstream 460749 12646838 ~ 12652570 (+)
CI01000004_14036114_14036449 KIAA0040 other downstream 1841542 14035393 ~ 14039142 (+)
CI01000004_15091390_15096502 GA45B, GADD45B, GADD45BB other downstream 2909239 15091200 ~ 15097173 (+)
G34220 NA other downstream 3757352 15939357 ~ 15939950 (+)

Expression


Co-expression Network