G31885


Basic Information

Item Value
gene id G31885
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 12184284 ~ 12184753 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU36145
CTCCAGGGGGGGTAATAAAAGCCATCTAAAGCGAAGCGATGCAGTTTTGTAAGAAAAATATCCATAATTATAACTTTATAAACTGTAATCACTAGCTAGGTAACATCCAACAACGAATTAATGAGCGAGTCAAGTTCTGGCGTATGACGTAGGAGTAGAGTAAGCTTAGGTGAGAGTAGACGCCTCTCGCGGTTCAAACAAATGGCTGGGCAACAAACTCAAGCTCCTCCGACATTTCTCTTTAAAAATTCTAATTTTAGACTTTTAATTCATGACCGGTGTTTTGTTTTGCTCTATCCTCTGCGCTTCTGTGTTCGTCAATACGTCATGCGTCGGGTCAGAGGTCACTCTTCGTCCGGAACTAGACTTGCTTACGGCCGTTACCGGGAGCCAGTTATTATAAAGTTTATAAAGTTGGATAAATATGAACATTTTTCTTACAAAAACCCATCACTTTGCTTCAGAAGGCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU36145 True 470 lncRNA 0.41 1 12184284 12184753

Neighbor

gene id symbol gene type direction distance location
CI01000004_12033980_12034384 NA coding upstream 149882 12033656 ~ 12034402 (+)
CI01000004_11897082_11898506 MYCB coding upstream 285069 11896232 ~ 11899215 (+)
CI01000004_11863724_11890961 NA coding upstream 293170 11863724 ~ 11891114 (+)
CI01000004_11776595_11786233 STARD3NL coding upstream 397367 11776419 ~ 11786917 (+)
CI01000004_11771176_11773391 EPDR1 coding upstream 410768 11771089 ~ 11773516 (+)
CI01000004_12222833_12223126 NA coding downstream 37173 12221926 ~ 12223244 (+)
CI01000004_12331486_12332789 NA coding downstream 146087 12330840 ~ 12332997 (+)
CI01000004_12353073_12362622 KLHL18 coding downstream 168207 12352960 ~ 12362716 (+)
CI01000004_12362858_12363136 NA coding downstream 178054 12362807 ~ 12363136 (+)
CI01000004_12376518_12381495 NA coding downstream 191671 12376424 ~ 12381705 (+)
G31800 NA non-coding upstream 1399 12182432 ~ 12182885 (+)
G31789 NA non-coding upstream 2279 12179891 ~ 12182005 (+)
G31790 NA non-coding upstream 4464 12177900 ~ 12179820 (+)
G31805 NA non-coding upstream 13635 12170321 ~ 12170649 (+)
G31854 NA non-coding upstream 21467 12162358 ~ 12162817 (+)
G31886 NA non-coding downstream 1271 12186024 ~ 12186394 (+)
G31887 NA non-coding downstream 3600 12188353 ~ 12188695 (+)
G31865 NA non-coding downstream 9199 12192130 ~ 12197418 (+)
G31862 NA non-coding downstream 35908 12220661 ~ 12257141 (+)
G31864 NA non-coding downstream 55054 12239807 ~ 12292695 (+)
CI01000004_11666900_11667179 NA other upstream 516625 11666900 ~ 11667659 (+)
G31710 NA other upstream 541884 11637251 ~ 11642400 (+)
G30797 NA other upstream 1686496 10497376 ~ 10497788 (+)
CI01000004_08976512_08980033 TTPA other upstream 3203300 8976254 ~ 8980984 (+)
G28859 NA other upstream 3584681 8599235 ~ 8599603 (+)
CI01000004_12646972_12652534 NA other downstream 458001 12646838 ~ 12652570 (+)
CI01000004_14036114_14036449 KIAA0040 other downstream 1838794 14035393 ~ 14039142 (+)
CI01000004_15091390_15096502 GA45B, GADD45B, GADD45BB other downstream 2906491 15091200 ~ 15097173 (+)
G34220 NA other downstream 3754604 15939357 ~ 15939950 (+)

Expression


Co-expression Network