Gene
RNA
| Item | Value |
|---|---|
| gene id | G31864 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000004 |
| NCBI id | null |
| chromosome length | 17451736 |
| location | 12239807 ~ 12292695 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU36119 | False | 1844 | lncRNA | 0.30 | 6 | 12239807 | 12292695 |
| TU36117 | False | 2161 | lncRNA | 0.38 | 4 | 12263895 | 12290684 |
| TU36113 | False | 1451 | lncRNA | 0.40 | 3 | 12267005 | 12292544 |
| TU36115 | False | 1337 | lncRNA | 0.39 | 2 | 12267005 | 12269801 |
| TU36114 | True | 1725 | lncRNA | 0.54 | 3 | 12271985 | 12292544 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000004_12222833_12223126 | NA | coding | upstream | 16563 | 12221926 ~ 12223244 (+) |
| CI01000004_12033980_12034384 | NA | coding | upstream | 205405 | 12033656 ~ 12034402 (+) |
| CI01000004_11897082_11898506 | MYCB | coding | upstream | 340592 | 11896232 ~ 11899215 (+) |
| CI01000004_11863724_11890961 | NA | coding | upstream | 348693 | 11863724 ~ 11891114 (+) |
| CI01000004_11776595_11786233 | STARD3NL | coding | upstream | 452890 | 11776419 ~ 11786917 (+) |
| CI01000004_12331486_12332789 | NA | coding | downstream | 38145 | 12330840 ~ 12332997 (+) |
| CI01000004_12353073_12362622 | KLHL18 | coding | downstream | 60265 | 12352960 ~ 12362716 (+) |
| CI01000004_12362858_12363136 | NA | coding | downstream | 70112 | 12362807 ~ 12363136 (+) |
| CI01000004_12376518_12381495 | NA | coding | downstream | 83729 | 12376424 ~ 12381705 (+) |
| CI01000004_12390372_12391923 | CCR9A | coding | downstream | 97677 | 12390372 ~ 12392180 (+) |
| G31865 | NA | non-coding | upstream | 42389 | 12192130 ~ 12197418 (+) |
| G31887 | NA | non-coding | upstream | 51112 | 12188353 ~ 12188695 (+) |
| G31886 | NA | non-coding | upstream | 53413 | 12186024 ~ 12186394 (+) |
| G31885 | NA | non-coding | upstream | 55054 | 12184284 ~ 12184753 (+) |
| G31800 | NA | non-coding | upstream | 56922 | 12182432 ~ 12182885 (+) |
| G31874 | NA | non-coding | downstream | 9924 | 12302619 ~ 12304869 (+) |
| G31930 | NA | non-coding | downstream | 58587 | 12351282 ~ 12351482 (+) |
| G31939 | NA | non-coding | downstream | 103696 | 12396391 ~ 12396626 (+) |
| G31952 | NA | non-coding | downstream | 169835 | 12462530 ~ 12463374 (+) |
| G31959 | NA | non-coding | downstream | 180428 | 12473123 ~ 12473405 (+) |
| CI01000004_11666900_11667179 | NA | other | upstream | 572148 | 11666900 ~ 11667659 (+) |
| G31710 | NA | other | upstream | 597407 | 11637251 ~ 11642400 (+) |
| G30797 | NA | other | upstream | 1742019 | 10497376 ~ 10497788 (+) |
| CI01000004_08976512_08980033 | TTPA | other | upstream | 3258823 | 8976254 ~ 8980984 (+) |
| CI01000004_12646972_12652534 | NA | other | downstream | 350059 | 12646838 ~ 12652570 (+) |
| CI01000004_14036114_14036449 | KIAA0040 | other | downstream | 1730852 | 14035393 ~ 14039142 (+) |
| CI01000004_15091390_15096502 | GA45B, GADD45B, GADD45BB | other | downstream | 2798549 | 15091200 ~ 15097173 (+) |
| G34220 | NA | other | downstream | 3646662 | 15939357 ~ 15939950 (+) |
| G33815 | NA | other | downstream | 3770720 | 16063415 ~ 16066464 (+) |
