G32701



Basic Information


Item Value
gene id G32701
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 12775782 ~ 12781490 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>TU37095
TATACAGCTGACATGACTAAGACAATTTCAATGAAGTTTGGCCCTAAAATGGAAAAGACATGGTTAGATATGTTTGATAAAGTACTGAGCTCATGTCATTGTCCTTGTCTTTCTACTTCACTGTTTTATATTGCCATGAGCAGCACAAGTACACACACACTATTGTGATGACATCTCTTCTTTTAGGATACAGGACATGGGAAAGACAGGTTTCATTTTTTGCAGTTATGTATTATTTTCTGTTGTCTTCAAACACGTATATATAATATATATTTATAAAGTGCCGTAACAACATGAAAATACATGATGCTGTTTTGAATAACATTTCGGTAAGTACAGTAAATGAAAAACTTCACAGTTTCATTTCAGATGTGCTGATTCTGTTTATAGTTTACTTTATCCAGCCACAAAATTGTGCTCAGTAGATATTACCATCTAGAACCTAGAGGTATTTATGTGCATTTTTCCCACCAAATTCTAGTATTTTTGTTTTGCTTGTTCTAAACACAGCCCCGTCATGTCATTTTACAAACTAATTGCTGAGGGCCAAGTCAAATTAGGAGCGAAGTCCATTTAAAAGTGTTTGGTTTTTTCCTTTCCAATAGCAGATTGACATGACATGTTAATATAAAATAAAAATTTCCAAACTATTAATACAGTTTGAAATTATTCAAAGATCAGCATACATGTTAAAACGTTCTTTCAAGGCAATCAAATGTGCTTTCTCTGTTTCTTTTTTACATTGTGCAGAATACATGAAACTGTGAATGAAATGTCCTTAAAGGGTTTTGCAGCACTACAAATACACTTGTTTACAATACTGAGATGAAGATATAACATTGTTGGCTTTAGACTGTGTCCTTTCTCATCAATAAACGATTTCTGTTTGACCAGACACTCGTGTAAAAAGCATTCCTGTATTTTTCAAGTTTCAGTCCAAAGCCATTGTTTGGCAATGTGTTTGAGATCAGCTGGCTTGAGGTTTTGGGGGAAAAGAGTGTAGTGTCACTGAACATAGCTAAAAATGATTACAACTGATGATAAAATACAGTTTTAGTACTATAAAAATAAAAAGGAAAAACCTCTTAGAAAGGTAGATTTCTGTTAAATGGCAAAAATGGATAATTACATACTGATTAAAATTACGACATCAATAGTGACACTAACATGAACTAGGTTTGACTCAGAACGTCCACTACACAGAGCACTCTGTACACATAACATTAGCTACGTTACCACAAGAAAAAGTAAAAACAACTAAAAATGAACCCCACTACAGCAACCCACCCTGATAAAAACAGAAAACACAAACATCAGTTGATTTTTTGTCTTTTTTTTCTTTTCTTTTTTTACATTACTGTACAACGGAGAGAGAGGACTAATAGAGGTGTGGAACAGTGCAAGAACAGCACTGATGCATAACATGTCTACTGTTATATAAAGAGTTTGCATGTCAAGGTCTGTTCGCATTGCAGTACCTAGAGACAGACACATGGACTTCATGCCACGTTCAAGGTCTGAGGACCAAACATCAGACAAACGAGAGGGCTTCAATCTTGTGCATTCACATTTGCGACAGCGATTAATTATACTGCAGCTACTGTGCACGTAGCCAGCTAAAGTGAACCAGTAAATAAAAGTGCTATTAGTCTCACGACACCTAAATTGCTGCTCTAATCTACTGCACCCGCTGTCTAACAGGGGAAAAGCTAGAGTCTGTGACCTGCATGTATGGTTGTGCTATGACCTCACAAAGACCAATGAACCTCTAACTACTCCCCTGAGTGTCTGATATCTCCTGTTAGGCAGCAGGGTTACTTTTATTTTTGTTGCATCTCTCAATTTTTTTTTCTTCTCTCTGGCTACTTTTTAAAGTTAGATTTTGTTTTGTATATTTTTGGATAAAATCTTATATATATATATATATATATATATATATATATATATATATATCTTACCTTCATGCAAAGATTAATTAAATGTACATATAACAATGATCTAGACTATTATGCCATCAGATTTAGAATACTGACTTTATCTGTGACCTGATCCGTCATTTTGAGTCGTTTTTCACCCAGAAGCACATGAGTTTTATGAACTAAATGAAAATATCTATAAAAATGATTATATATAATTATGTTTATGCTGAGTTATAATTAAATGGTCTGTCAAAAACACTTGTTTTGACATCAAGTTTCCAAACAATTTCAGGCATTTTTTTAATAGATTTTAGAGATTAGTCAAAGTAATAAAAACATCAATAACATGTTACGTAAAATTTAATGAATTTAGGTATGATTTTTTTCCCCCAACTAACTTTATTAACAAGCAATAAACACTGACATGACTTTCCTGAGGTAAATGTAGTCAGGTGATGTTTGTTCACGAGCTGTTTTATTAACGTCTTTCCGCAATTGAAACACGATTACATGAGAGACGATACGTTCGGTAAGTTGTACTGTATCTTTCAACATATCTTCTGATTAGGGTGACCATATGTCATGTTTTTCCCGGGACAGTCCCGTATTTCAGCTTCAGTCCCGTATTTTTAGAAAAAATACAATTTCTTTTTATTAAGAAAAAAAACATGTTTTGTCCCGTATTTCATCTTTCCTAAAATTTCGTTACTACTGATAGAATGAGTAGTGTTCTGTCACGCGAGAACAGCCCTATCAAATTCGTCACAGAACATGAATTCGGCCTTAAAGGGACAGTAGCCTAATTAAATATTTGTCTGTCATTAATGTTAATCAAACAACAAAATATGTTAAATAAATGTATACATGGTAAACAAACCTACTGTATCTGAAAAACAAGTTTATTCAATTTTGTATCTCTATTGTATTTGTTGTATTGTTTGTAAACTTCTATTTTTAATATTATATATATATATATATAAAAAACAATAATTACCATGAAATAAAATTTCTCATATTACAAATAAAATGGTCATATTGCCCACCCTTTGCTCACCCGTCCCGTATTCTACCATGAGAAATATGGTCACCCTACTTCTGATGTGTATTCCTGCTATAACTAGTAGTAAAGAGGAAGAAACGATCCGTTCACTCGCGATCCGTGTTGCCATTTGAATTAAGTCAACTGCAGCGATCTGTCAGGCTACATTAAAGAGCGTCAAAACGACATTTGTTAAATTTCATAATAAAATGAAGCCAATATGAAAACTGAGACTTTCTATGTATTATTGGTATTTTCTCCTCACAATCACATTTTTCCACAAACGCCTCATTCCGACTCAAAATGACAGAAGCAGCATGTCACAAATGTATTGCGTTTCTCCTTGCACAACGCAGAAGAGAAAAACCAATACTACTTTCACTTAACTATACACAGTGATTCGTCATTTATTCAGAAGTCTCAATACGTGACGCGTCAGCACATTAGCAGCTATATTGCTAGACTCCCTATTGAAAGGCGTCAGGCAACATCCCAGACAAATTCACAGTGTAACCAGGACTCTCTATCCATGTATATGTGCCACTGCAACCATATGCATCCTAAGTAGGGGGCCTTGTTGATACATCACTGGAATGATATGATAAGCAGCATCTAGCCATACCAACTACCAAGCTCTCAATCCGAGTATCTCCCCTCCCTATTGCCTACAAAACGAAACAACACCTAATATGCTGTGGTTTCTATTGTAAAAATCAGATGGTTTGACCTATTATTTGTCTCGCAAGTCTATTTCATGTTATTCACAATAATAAGGAGGACAAACTGCTGACTACCCATCAATTACACTAACCACAGTGATTGTGACTGATGCTACGTTTACCTCTGATCATTCTGCAAGCAACCTTAACCCTTATTCGATCACACAACTGCTTGGCTCAGCACAGCCAGATGCCTTTAAATGACACATACACACCGGTTCAAGTCTCTTAACACGCATAGACAACAAAAAAGTACACACAAACACAAACATACCAGCTAAATCATCAGAATACAAAGGTCTGTGCACATGTTTTTGGTAACATGCCTCCTTTTCTGTGAAGAGCAGGGTTAGTGTGCATACTACAGTACTGAATCTAATGAGAAACTAGCTGCTTTTATTATCGCACACGTGATCCCCTCGCTCAGAAGATGCCTCGGCTCGAGATGCCTGGAAGACTAGACAGATTTGGCATTTCATGTGGAAGTTCCTACATGAAAATCCCTCTTCCTTCATGTCAAACACTCAACATCAGCAATAAATCATCTCAAGGTGTTGGAAAATGTTTAAAAAAAAAAAAGCAAATTGTGTGTAACCCTGAGAATGGGCTTGAGAGGTTATATGCCTCGGTCCAGATACCTCAGTCAGTAAGAGCTTAAGACCAAATATCCTTTGTTTTATATTTGTGCTCTCACTTTAAAGGGAAATAGAGTTGATATTCTCTTGGCCTATTCTTATTTATCGATATCAGCCAGTCTACTTGGCCGATTAACAAAAGCGTTAGCGCCAAAATCTACCGGTAGTCTAGTCAATGGATAATAGACATGTTCTGGTTTGTATTTTTAAGTGGATTTTTGAATTAATTCAGTATTAAAAGGTCATTTTATTTAACATATAATATATCATATACTGGCATTATATTGACCATCGGCCACCCTGCTCTCAGACATCAGCTTGGCTATGGAAAAACCCATATTGGCTTGCAAATGAGACGGTTCCCAATCAAGACAATAGGTACAAACAGAAACTGAAAATAACACTCCCCTTAACAGTGCCATTACAACATTGCCACAAAGAATATTTGGTCTTCAGCTTTTAAACCTGACCAGCACTACCACCACCACTACACACACACAAGCCAAATCCCACTGTAGCTCCTGTTGCCACTACAGTCACATCTCCAGACTATTCAACACAGATTGAAAATATTGTACAATGCGCTATATACACACTGTGTGTATGCAAACACCTCCTGTATATGAACATGTCTTTTTTTATTAAAAAAAACTGCAGTATTAAATTATGTGAACAAAAAGAAAAAGGTTTTGGATGACAACCAATTTCTCTAGAGGTTAGATTTCATAAAGCCCTTACAATATGTAAAGGTCTCCAGCGAGAGTGGCCTGTCCCGCAGTGTGGAAATGGGAACCGTCCTGGGGGGAGGGTGTGGAAGGGGCTCCTCTATGCACTGGGTGTGGGGTTCAATGTGGAGCCGTTGCTTCCTGGGATGGTCAGACCGATCTCATCTTCTTTCTCTTTGAGTTTCTCTTTCCCCTCATCTTTCAGATCTTCTTTGAGAGGGCACACCTCCACAGATTCGGGGCCCGTGGTGGCGTATCGTCCCTTGCGGTGCTCCTGGAGAGCAGGGCCCCAGTCCAGATCAGGCTTC

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU37095 True 5345 lncRNA 0.45 2 12775782 12781490

Neighbor


gene id symbol gene type direction distance location
CI01000004_12748162_12752913 NA coding downstream 22507 12747939 ~ 12753275 (-)
CI01000004_12574165_12577698 NA coding downstream 195603 12574085 ~ 12580179 (-)
CI01000004_12550061_12550882 NA coding downstream 224851 12549886 ~ 12550931 (-)
CI01000004_12404227_12411145 PRPF4BA coding downstream 364117 12403532 ~ 12411665 (-)
CI01000004_12364142_12368537 BFSP2 coding downstream 407110 12364035 ~ 12368672 (-)
CI01000004_12781663_12809789 NA coding upstream 35 12781525 ~ 12809789 (-)
CI01000004_12823734_12925962 B4GALT2 coding upstream 42244 12823734 ~ 12925962 (-)
CI01000004_12952019_12956814 ATP6V0B coding upstream 170269 12951759 ~ 12956814 (-)
CI01000004_13086552_13088659 NA coding upstream 303334 13084824 ~ 13088898 (-)
CI01000004_13089864_13091636 NA coding upstream 307093 13088583 ~ 13091669 (-)
G32707 NA non-coding downstream 62606 12707058 ~ 12713176 (-)
G32606 NA non-coding downstream 119955 12600800 ~ 12655827 (-)
G32647 NA non-coding downstream 181760 12593388 ~ 12594022 (-)
G32285 NA non-coding downstream 301600 12473942 ~ 12474182 (-)
G32281 NA non-coding downstream 308453 12467119 ~ 12467329 (-)
G32720 NA non-coding upstream 131724 12913214 ~ 12921534 (-)
G32798 NA non-coding upstream 184380 12965870 ~ 12966103 (-)
G32810 NA non-coding upstream 200966 12982456 ~ 12982781 (-)
G32822 NA non-coding upstream 217652 12999142 ~ 13000643 (-)
G32207 NA other downstream 391002 12376168 ~ 12384780 (-)
G32150 NA other downstream 994831 11776519 ~ 11780951 (-)
CI01000004_11407198_11412220 ADCYAP1B, ADCYAP1 other downstream 1362875 11406957 ~ 11412907 (-)
G31203 NA other downstream 2025141 10746437 ~ 10750641 (-)
G30316 NA other downstream 3368861 9377937 ~ 9406921 (-)
CI01000004_14543631_14551256 NA other upstream 1769310 14541515 ~ 14551352 (-)
G33746 NA other upstream 1787303 14568793 ~ 14569264 (-)
G33750 NA other upstream 1796968 14578458 ~ 14579001 (-)
G33755 NA other upstream 1799916 14581406 ~ 14581873 (-)
G33756 NA other upstream 1803681 14585171 ~ 14585745 (-)

Expression



Co-expression Network