G33108


Basic Information

Item Value
gene id G33108
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 14430991 ~ 14431234 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU37537
TTGAGTAGCCCCTACAAAAACTCTCAAGTCATTTGATTTCAAAATGAATGCATTTCCTACCCTGTTAGTTTCAGTTTGACCAGACCCTCAGTCATGGCCTGACAGCTATTACCACACTACCATAAATCACTAACACACTGTCAAATTGCACAATTCGTAATATGAAATTGTAATAATGTTTACTGTTCTGCAGACTGAAGTGAGAGTCAGAATCAATGTCTTTGAATTTAAAGGATTAGTTCAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU37537 True 244 lncRNA 0.36 1 14430991 14431234

Neighbor

gene id symbol gene type direction distance location
CI01000004_14412728_14424282 SMG7 coding upstream 6125 14412728 ~ 14424866 (+)
CI01000004_14371097_14380914 NA coding upstream 50077 14370061 ~ 14380914 (+)
CI01000004_14283392_14361256 LAMC1 coding upstream 67858 14282136 ~ 14363133 (+)
CI01000004_14266999_14280382 DHX9 coding upstream 150382 14266999 ~ 14280609 (+)
CI01000004_14172465_14263988 RASAL2 coding upstream 167003 14172465 ~ 14263988 (+)
CI01000004_14448323_14458776 NA coding downstream 15271 14446505 ~ 14459181 (+)
CI01000004_14498216_14504721 NA coding downstream 66820 14498054 ~ 14505155 (+)
CI01000004_14507781_14513019 NA coding downstream 75326 14506560 ~ 14513444 (+)
CI01000004_14864427_14865483 ING5B, ING5, ING5.L coding downstream 432864 14864098 ~ 14865753 (+)
CI01000004_14877615_14885956 PAK2A, PAK2 coding downstream 446226 14877460 ~ 14886499 (+)
G33181 NA non-coding upstream 64544 14366239 ~ 14366447 (+)
G33180 NA non-coding upstream 65451 14365319 ~ 14365540 (+)
G33149 NA non-coding upstream 72013 14268887 ~ 14358978 (+)
G33150 NA non-coding upstream 229124 14164219 ~ 14201867 (+)
G33144 NA non-coding upstream 241101 14177406 ~ 14189890 (+)
G33096 NA non-coding downstream 31972 14463206 ~ 14473902 (+)
G33644 NA non-coding downstream 97296 14528530 ~ 14528781 (+)
G33662 NA non-coding downstream 103844 14535078 ~ 14535344 (+)
G33919 NA non-coding downstream 326898 14758132 ~ 14792115 (+)
G33924 NA non-coding downstream 336780 14768014 ~ 14808289 (+)
CI01000004_14036114_14036449 KIAA0040 other upstream 394091 14035393 ~ 14039142 (+)
CI01000004_12646972_12652534 NA other upstream 1775280 12646838 ~ 12652570 (+)
G31865 NA other upstream 2235844 12192130 ~ 12197418 (+)
CI01000004_11666900_11667179 NA other upstream 2763332 11666900 ~ 11667659 (+)
G31710 NA other upstream 2788591 11637251 ~ 11642400 (+)
CI01000004_15091390_15096502 GA45B, GADD45B, GADD45BB other downstream 660010 15091200 ~ 15097173 (+)
G34220 NA other downstream 1508123 15939357 ~ 15939950 (+)
G33815 NA other downstream 1632181 16063415 ~ 16066464 (+)
G34400 NA other downstream 2546094 16971995 ~ 17025976 (+)

Expression


Co-expression Network